RNA–Protein interactions for RNA: ENST00000494268.1

MSL3-217, Transcript of MSL complex subunit 3, humanhuman

TSL 2

Gene MSL3, Length 1,124 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-217ENST00000494268 MEGF8Q7Z7M0 2845 aa2.5□□□□□ -2.01
MSL3-217ENST00000494268 NBEAL2Q6ZNJ1 2754 aa2.49□□□□□ -2.01
MSL3-217ENST00000494268 DEFB4AO15263 64 aa2.49□□□□□ -2.01
MSL3-217ENST00000494268 DEFB131AP59861 70 aa2.49□□□□□ -2.01
MSL3-217ENST00000494268 PCOTHQ58A44 107 aa2.49□□□□□ -2.01
MSL3-217ENST00000494268 PLAC4Q8WY50 150 aa2.49□□□□□ -2.01
MSL3-217ENST00000494268 TENM3Q9P273 2699 aa2.48□□□□□ -2.01
MSL3-217ENST00000494268 GVQW2A0A096LPI5 108 aaPredicted RBP2.48□□□□□ -2.01
MSL3-217ENST00000494268 H0YAA0 97 aa2.48□□□□□ -2.01
MSL3-217ENST00000494268 WFDC10BQ8IUB3 73 aa2.48□□□□□ -2.01
MSL3-217ENST00000494268 PRKDCP78527 4128 aaKnown RBP2.48□□□□□ -2.01
MSL3-217ENST00000494268 DNAH9Q9NYC9 4486 aa2.46□□□□□ -2.01
MSL3-217ENST00000494268 MMP24-AS1A0A0U1RRL7 71 aa2.46□□□□□ -2.02
MSL3-217ENST00000494268 DEFB135Q30KP9 77 aa2.46□□□□□ -2.02
MSL3-217ENST00000494268 TGP01266 2768 aa2.45□□□□□ -2.02
MSL3-217ENST00000494268 HUWE1Q7Z6Z7 4374 aaKnown RBP2.45□□□□□ -2.02
MSL3-217ENST00000494268 HTN1P15515 57 aa2.45□□□□□ -2.02
MSL3-217ENST00000494268 Q6ZRN7 208 aaPredicted RBP2.45□□□□□ -2.02
MSL3-217ENST00000494268 MRPL34Q9BQ48 92 aaKnown RBP2.45□□□□□ -2.02
MSL3-217ENST00000494268 A8MTW9 85 aa2.44□□□□□ -2.02
MSL3-217ENST00000494268 TOMM7Q9P0U1 55 aa2.44□□□□□ -2.02
MSL3-217ENST00000494268 SPINK13Q1W4C9 94 aa2.43□□□□□ -2.02
MSL3-217ENST00000494268 Q6ZSA8 131 aa2.43□□□□□ -2.02
MSL3-217ENST00000494268 DEFB104AQ8WTQ1 72 aa2.43□□□□□ -2.02
MSL3-217ENST00000494268 CRIPTQ9P021 101 aa2.43□□□□□ -2.02
MSL3-217ENST00000494268 DNAH7Q8WXX0 4024 aa2.43□□□□□ -2.02
MSL3-217ENST00000494268 CSMD3Q7Z407 3707 aa2.42□□□□□ -2.02
MSL3-217ENST00000494268 STAB2Q8WWQ8 2551 aa2.41□□□□□ -2.02
MSL3-217ENST00000494268 HTN3P15516 51 aa2.41□□□□□ -2.02
MSL3-217ENST00000494268 TENM2Q9NT68 2774 aa2.4□□□□□ -2.02
MSL3-217ENST00000494268 CLPSL2Q6UWE3 100 aa2.4□□□□□ -2.03
MSL3-217ENST00000494268 DYNC2H1Q8NCM8 4307 aaKnown RBP2.4□□□□□ -2.03
MSL3-217ENST00000494268 DEFB130BP0DP73 79 aa2.39□□□□□ -2.03
MSL3-217ENST00000494268 DEFB130AP0DP74 79 aa2.39□□□□□ -2.03
MSL3-217ENST00000494268 NOP10Q9NPE3 64 aaKnown RBP2.39□□□□□ -2.03
MSL3-217ENST00000494268 A0A096LPF7 62 aa2.37□□□□□ -2.03
MSL3-217ENST00000494268 H1FX-AS1Q4G0G2 97 aa2.37□□□□□ -2.03
MSL3-217ENST00000494268 LYSTQ99698 3801 aa2.37□□□□□ -2.03
MSL3-217ENST00000494268 SPART-AS1P0CW21 52 aa2.36□□□□□ -2.03
MSL3-217ENST00000494268 RPL37P61927 97 aaKnown RBP2.36□□□□□ -2.03
MSL3-217ENST00000494268 STARD9Q9P2P6 4700 aa2.36□□□□□ -2.03
MSL3-217ENST00000494268 PLECQ15149 4684 aaKnown RBP2.35□□□□□ -2.03
MSL3-217ENST00000494268 SPRR1AP35321 89 aa2.35□□□□□ -2.03
MSL3-217ENST00000494268 VPS13DQ5THJ4 4388 aa2.35□□□□□ -2.03
MSL3-217ENST00000494268 DNAH1Q9P2D7 4330 aa2.34□□□□□ -2.03
MSL3-217ENST00000494268 APLNQ9ULZ1 77 aa2.34□□□□□ -2.03
MSL3-217ENST00000494268 DNAH6Q9C0G6 4158 aa2.33□□□□□ -2.04
MSL3-217ENST00000494268 FRAS1Q86XX4 4008 aa2.31□□□□□ -2.04
MSL3-217ENST00000494268 UBE2DNLQ8IWF7 75 aa2.31□□□□□ -2.04
MSL3-217ENST00000494268 KMT2AQ03164 3969 aa2.31□□□□□ -2.04
MSL3-217ENST00000494268 KRTAP21-2Q3LI59 83 aa2.3□□□□□ -2.04
MSL3-217ENST00000494268 DNAH10Q8IVF4 4471 aa2.3□□□□□ -2.04
MSL3-217ENST00000494268 SACSQ9NZJ4 4579 aa2.3□□□□□ -2.04
MSL3-217ENST00000494268 KMT2CQ8NEZ4 4911 aaKnown RBP2.3□□□□□ -2.04
MSL3-217ENST00000494268 FLG2Q5D862 2391 aaPredicted RBP2.29□□□□□ -2.04
MSL3-217ENST00000494268 H3BNG1 76 aa2.29□□□□□ -2.04
MSL3-217ENST00000494268 SPRR1BP22528 89 aa2.29□□□□□ -2.04
MSL3-217ENST00000494268 UNQ6190/PRO20217Q6UXQ8 127 aa2.29□□□□□ -2.04
MSL3-217ENST00000494268 C10orf95Q9H7T3 257 aa2.29□□□□□ -2.04
MSL3-217ENST00000494268 PRO0255Q9UI72 69 aa2.29□□□□□ -2.04
MSL3-217ENST00000494268 DNAH2Q9P225 4427 aa2.28□□□□□ -2.04
MSL3-217ENST00000494268 HYDINQ4G0P3 5121 aa2.28□□□□□ -2.05
MSL3-217ENST00000494268 DEFB105AQ8NG35 78 aa2.27□□□□□ -2.05
MSL3-217ENST00000494268 RYR3Q15413 4870 aa2.26□□□□□ -2.05
MSL3-217ENST00000494268 DNAH17Q9UFH2 4485 aa2.26□□□□□ -2.05
MSL3-217ENST00000494268 RYR2Q92736 4967 aa2.26□□□□□ -2.05
MSL3-217ENST00000494268 LELP1Q5T871 98 aa2.26□□□□□ -2.05
MSL3-217ENST00000494268 PKD1P98161 4303 aa2.26□□□□□ -2.05
MSL3-217ENST00000494268 HECTD4Q9Y4D8 3996 aa2.25□□□□□ -2.05
MSL3-217ENST00000494268 FAT2Q9NYQ8 4349 aa2.23□□□□□ -2.05
MSL3-217ENST00000494268 DNAH11Q96DT5 4516 aa2.23□□□□□ -2.05
MSL3-217ENST00000494268 LINC01556Q5JQF7 62 aa2.23□□□□□ -2.05
MSL3-217ENST00000494268 PKHD1P08F94 4074 aa2.21□□□□□ -2.06
MSL3-217ENST00000494268 EPPK1P58107 5090 aaKnown RBP2.2□□□□□ -2.06
MSL3-217ENST00000494268 SMR3BP02814 79 aaPredicted RBP2.2□□□□□ -2.06
MSL3-217ENST00000494268 DNAH5Q8TE73 4624 aa2.19□□□□□ -2.06
MSL3-217ENST00000494268 DNAH8Q96JB1 4490 aa2.18□□□□□ -2.06
MSL3-217ENST00000494268 S4R3F8 94 aa2.17□□□□□ -2.06
MSL3-217ENST00000494268 PRLHP81277 87 aa2.16□□□□□ -2.06
MSL3-217ENST00000494268 DYNC1H1Q14204 4646 aaKnown RBP2.16□□□□□ -2.06
MSL3-217ENST00000494268 BIRC6Q9NR09 4857 aa2.16□□□□□ -2.06
MSL3-217ENST00000494268 LRP1BQ9NZR2 4599 aa2.14□□□□□ -2.07
MSL3-217ENST00000494268 Q5VSD8 79 aa2.14□□□□□ -2.07
MSL3-217ENST00000494268 APOBP04114 4563 aaKnown RBP2.14□□□□□ -2.07
MSL3-217ENST00000494268 KIAA1109Q2LD37 5005 aa2.13□□□□□ -2.07
MSL3-217ENST00000494268 A0A096LNI7 61 aa2.13□□□□□ -2.07
MSL3-217ENST00000494268 HSPG2P98160 4391 aa2.12□□□□□ -2.07
MSL3-217ENST00000494268 PKHD1L1Q86WI1 4243 aa2.11□□□□□ -2.07
MSL3-217ENST00000494268 SRRM2Q9UQ35 2752 aaKnown RBP2.11□□□□□ -2.07
MSL3-217ENST00000494268 VPS13BQ7Z7G8 4022 aa2.1□□□□□ -2.07
MSL3-217ENST00000494268 RYR1P21817 5038 aa2.09□□□□□ -2.08
MSL3-217ENST00000494268 HERC2O95714 4834 aa2.09□□□□□ -2.08
MSL3-217ENST00000494268 SPINK1P00995 79 aa2.08□□□□□ -2.08
MSL3-217ENST00000494268 KRTAP10-4P60372 401 aaPredicted RBP2.08□□□□□ -2.08
MSL3-217ENST00000494268 FAT1Q14517 4588 aa2.08□□□□□ -2.08
MSL3-217ENST00000494268 KRTAP13-4Q3LI77 160 aa2.07□□□□□ -2.08
MSL3-217ENST00000494268 ABCA13Q86UQ4 5058 aa2.06□□□□□ -2.08
MSL3-217ENST00000494268 PCLOQ9Y6V0 5065 aa2.06□□□□□ -2.08
MSL3-217ENST00000494268 KRTAP12-1P59990 96 aa2.06□□□□□ -2.08
MSL3-217ENST00000494268 CRCT1Q9UGL9 99 aa2.03□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 167 ms