RNA–Protein interactions for RNA: ENST00000493537.5

SUPT20H-221, Transcript of SPT20 homolog, SAGA complex component, humanhuman

TSL 5

Gene SUPT20H, Length 2,149 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT20H-221ENST00000493537 TENM3Q9P273 2699 aa1.95□□□□□ -2.1
SUPT20H-221ENST00000493537 COL7A1Q02388 2944 aa1.94□□□□□ -2.1
SUPT20H-221ENST00000493537 LYSTQ99698 3801 aa1.94□□□□□ -2.1
SUPT20H-221ENST00000493537 LCE1AQ5T7P2 110 aa1.94□□□□□ -2.1
SUPT20H-221ENST00000493537 ANK2Q01484 3957 aa1.93□□□□□ -2.1
SUPT20H-221ENST00000493537 ACANP16112 2415 aa1.92□□□□□ -2.1
SUPT20H-221ENST00000493537 TGP01266 2768 aa1.92□□□□□ -2.1
SUPT20H-221ENST00000493537 ITPR2Q14571 2701 aa1.91□□□□□ -2.1
SUPT20H-221ENST00000493537 FLNAP21333 2647 aaKnown RBP1.91□□□□□ -2.1
SUPT20H-221ENST00000493537 FASNP49327 2511 aaKnown RBP1.91□□□□□ -2.1
SUPT20H-221ENST00000493537 DNAH8Q96JB1 4490 aa1.91□□□□□ -2.1
SUPT20H-221ENST00000493537 TEP1Q99973 2627 aaKnown RBP1.91□□□□□ -2.1
SUPT20H-221ENST00000493537 ZNF469Q96JG9 3925 aaPredicted RBP1.91□□□□□ -2.1
SUPT20H-221ENST00000493537 COL6A5A8TX70 2615 aa1.9□□□□□ -2.1
SUPT20H-221ENST00000493537 KRTAP12-1P59990 96 aa1.9□□□□□ -2.1
SUPT20H-221ENST00000493537 NOTCH2Q04721 2471 aa1.9□□□□□ -2.11
SUPT20H-221ENST00000493537 VPS13DQ5THJ4 4388 aa1.89□□□□□ -2.11
SUPT20H-221ENST00000493537 DNAH3Q8TD57 4116 aa1.89□□□□□ -2.11
SUPT20H-221ENST00000493537 RPS29P62273 56 aaKnown RBP1.88□□□□□ -2.11
SUPT20H-221ENST00000493537 DNAH10Q8IVF4 4471 aa1.88□□□□□ -2.11
SUPT20H-221ENST00000493537 NOTCH1P46531 2555 aa1.88□□□□□ -2.11
SUPT20H-221ENST00000493537 TENM1Q9UKZ4 2725 aa1.88□□□□□ -2.11
SUPT20H-221ENST00000493537 CACNA1AO00555 2505 aa1.88□□□□□ -2.11
SUPT20H-221ENST00000493537 ATRQ13535 2644 aa1.88□□□□□ -2.11
SUPT20H-221ENST00000493537 MYO18BQ8IUG5 2567 aa1.87□□□□□ -2.11
SUPT20H-221ENST00000493537 FBN3Q75N90 2809 aa1.87□□□□□ -2.11
SUPT20H-221ENST00000493537 A0A0D9SG42 100 aa1.87□□□□□ -2.11
SUPT20H-221ENST00000493537 DNAH9Q9NYC9 4486 aa1.86□□□□□ -2.11
SUPT20H-221ENST00000493537 DNAH6Q9C0G6 4158 aa1.85□□□□□ -2.11
SUPT20H-221ENST00000493537 DNAH7Q8WXX0 4024 aa1.85□□□□□ -2.11
SUPT20H-221ENST00000493537 DNAH17Q9UFH2 4485 aa1.85□□□□□ -2.11
SUPT20H-221ENST00000493537 PRKDCP78527 4128 aaKnown RBP1.85□□□□□ -2.11
SUPT20H-221ENST00000493537 FLNBO75369 2602 aaKnown RBP1.85□□□□□ -2.11
SUPT20H-221ENST00000493537 STAB2Q8WWQ8 2551 aa1.85□□□□□ -2.11
SUPT20H-221ENST00000493537 MAST4O15021 2626 aa1.85□□□□□ -2.11
SUPT20H-221ENST00000493537 DYNC2H1Q8NCM8 4307 aaKnown RBP1.85□□□□□ -2.11
SUPT20H-221ENST00000493537 DMBT1Q9UGM3 2413 aaPredicted RBP1.85□□□□□ -2.11
SUPT20H-221ENST00000493537 KRTAP4-4Q9BYR3 166 aa1.84□□□□□ -2.11
SUPT20H-221ENST00000493537 IGSF10Q6WRI0 2623 aa1.84□□□□□ -2.11
SUPT20H-221ENST00000493537 M0QZ58 72 aa1.84□□□□□ -2.12
SUPT20H-221ENST00000493537 HECTD4Q9Y4D8 3996 aa1.84□□□□□ -2.12
SUPT20H-221ENST00000493537 KRTAP5-1Q6L8H4 278 aa1.82□□□□□ -2.12
SUPT20H-221ENST00000493537 NSD1Q96L73 2696 aaPredicted RBP1.81□□□□□ -2.12
SUPT20H-221ENST00000493537 USP24Q9UPU5 2620 aa1.81□□□□□ -2.12
SUPT20H-221ENST00000493537 KRTAP10-10P60014 251 aa1.8□□□□□ -2.12
SUPT20H-221ENST00000493537 LCE3CQ5T5A8 94 aa1.8□□□□□ -2.12
SUPT20H-221ENST00000493537 SMR3AQ99954 134 aa1.8□□□□□ -2.12
SUPT20H-221ENST00000493537 CMYA5Q8N3K9 4069 aa1.79□□□□□ -2.12
SUPT20H-221ENST00000493537 KMT2AQ03164 3969 aa1.79□□□□□ -2.12
SUPT20H-221ENST00000493537 HUWE1Q7Z6Z7 4374 aaKnown RBP1.79□□□□□ -2.12
SUPT20H-221ENST00000493537 KRTAP6-3Q3LI67 103 aa1.78□□□□□ -2.12
SUPT20H-221ENST00000493537 KRTAP5-11Q6L8G4 156 aa1.78□□□□□ -2.12
SUPT20H-221ENST00000493537 KRTAP5-2Q701N4 177 aa1.78□□□□□ -2.12
SUPT20H-221ENST00000493537 LCE1EQ5T753 118 aa1.78□□□□□ -2.13
SUPT20H-221ENST00000493537 DNAH2Q9P225 4427 aa1.78□□□□□ -2.13
SUPT20H-221ENST00000493537 MGAM2Q2M2H8 2515 aa1.77□□□□□ -2.13
SUPT20H-221ENST00000493537 STAB1Q9NY15 2570 aa1.77□□□□□ -2.13
SUPT20H-221ENST00000493537 DNAH11Q96DT5 4516 aa1.76□□□□□ -2.13
SUPT20H-221ENST00000493537 KRTAP12-4P60329 112 aa1.76□□□□□ -2.13
SUPT20H-221ENST00000493537 KRTAP10-12P60413 245 aa1.76□□□□□ -2.13
SUPT20H-221ENST00000493537 KRTAP5-8O75690 187 aa1.74□□□□□ -2.13
SUPT20H-221ENST00000493537 C9orf92A6NGG3 77 aa1.73□□□□□ -2.13
SUPT20H-221ENST00000493537 KRTAP10-7P60409 375 aaPredicted RBP1.73□□□□□ -2.13
SUPT20H-221ENST00000493537 SACSQ9NZJ4 4579 aa1.72□□□□□ -2.13
SUPT20H-221ENST00000493537 MYCBP2O75592 4640 aa1.71□□□□□ -2.14
SUPT20H-221ENST00000493537 PKHD1L1Q86WI1 4243 aa1.7□□□□□ -2.14
SUPT20H-221ENST00000493537 PLECQ15149 4684 aaKnown RBP1.69□□□□□ -2.14
SUPT20H-221ENST00000493537 LRP1BQ9NZR2 4599 aa1.68□□□□□ -2.14
SUPT20H-221ENST00000493537 VPS13BQ7Z7G8 4022 aa1.68□□□□□ -2.14
SUPT20H-221ENST00000493537 J3QKU1 62 aa1.67□□□□□ -2.14
SUPT20H-221ENST00000493537 PKHD1P08F94 4074 aa1.67□□□□□ -2.14
SUPT20H-221ENST00000493537 LRP1Q07954 4544 aaKnown RBP1.66□□□□□ -2.14
SUPT20H-221ENST00000493537 DNAH5Q8TE73 4624 aa1.66□□□□□ -2.14
SUPT20H-221ENST00000493537 LCE3EQ5T5B0 92 aa1.65□□□□□ -2.15
SUPT20H-221ENST00000493537 TNXBP22105 4242 aa1.65□□□□□ -2.15
SUPT20H-221ENST00000493537 PKD1P98161 4303 aa1.64□□□□□ -2.15
SUPT20H-221ENST00000493537 APOBP04114 4563 aaKnown RBP1.63□□□□□ -2.15
SUPT20H-221ENST00000493537 GPR98Q8WXG9 6306 aa1.63□□□□□ -2.15
SUPT20H-221ENST00000493537 FAT2Q9NYQ8 4349 aa1.62□□□□□ -2.15
SUPT20H-221ENST00000493537 STARD9Q9P2P6 4700 aa1.62□□□□□ -2.15
SUPT20H-221ENST00000493537 KRTAP10-4P60372 401 aaPredicted RBP1.61□□□□□ -2.15
SUPT20H-221ENST00000493537 TNP1P09430 55 aa1.61□□□□□ -2.15
SUPT20H-221ENST00000493537 KRTAP10-5P60370 271 aa1.59□□□□□ -2.15
SUPT20H-221ENST00000493537 HSPG2P98160 4391 aa1.57□□□□□ -2.16
SUPT20H-221ENST00000493537 KRTAP4-3Q9BYR4 195 aa1.57□□□□□ -2.16
SUPT20H-221ENST00000493537 FLGP20930 4061 aaPredicted RBP1.56□□□□□ -2.16
SUPT20H-221ENST00000493537 LCE3DQ9BYE3 92 aa1.55□□□□□ -2.16
SUPT20H-221ENST00000493537 DYNC1H1Q14204 4646 aaKnown RBP1.55□□□□□ -2.16
SUPT20H-221ENST00000493537 FAT3Q8TDW7 4589 aa1.55□□□□□ -2.16
SUPT20H-221ENST00000493537 KRTAP12-3P60328 96 aa1.53□□□□□ -2.16
SUPT20H-221ENST00000493537 KRTAP21-3Q3LHN1 58 aa1.52□□□□□ -2.17
SUPT20H-221ENST00000493537 FAT1Q14517 4588 aa1.52□□□□□ -2.17
SUPT20H-221ENST00000493537 KRTAP8-1Q8IUC2 63 aa1.52□□□□□ -2.17
SUPT20H-221ENST00000493537 M0R2T5 61 aa1.5□□□□□ -2.17
SUPT20H-221ENST00000493537 KRTAP5-5Q701N2 237 aaPredicted RBP1.49□□□□□ -2.17
SUPT20H-221ENST00000493537 SMR3BP02814 79 aaPredicted RBP1.48□□□□□ -2.17
SUPT20H-221ENST00000493537 KRTAP19-2Q3LHN2 52 aa1.47□□□□□ -2.17
SUPT20H-221ENST00000493537 LCE3AQ5TA76 89 aa1.47□□□□□ -2.17
SUPT20H-221ENST00000493537 OBSCNQ5VST9 7968 aa1.46□□□□□ -2.18
SUPT20H-221ENST00000493537 KRTAP2-3P0C7H8 128 aa1.44□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms