RNA–Protein interactions for RNA: ENST00000492626.5

SNX13-209, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,956 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-209ENST00000492626 CDC42SE2Q9NRR3 84 aa1.38□□□□□ -2.19
SNX13-209ENST00000492626 SMIM11BQ8TCY0 68 aa1.37□□□□□ -2.19
SNX13-209ENST00000492626 LINC00959A0A1B0GUT2 108 aa1.37□□□□□ -2.19
SNX13-209ENST00000492626 RNASE3P12724 160 aaKnown RBP1.37□□□□□ -2.19
SNX13-209ENST00000492626 ROMO1P60602 79 aa1.37□□□□□ -2.19
SNX13-209ENST00000492626 KRTAP5-11Q6L8G4 156 aa1.37□□□□□ -2.19
SNX13-209ENST00000492626 ATP11AUNQ6ZP68 121 aa1.37□□□□□ -2.19
SNX13-209ENST00000492626 I3L2K1 104 aa1.37□□□□□ -2.19
SNX13-209ENST00000492626 KRTAP19-2Q3LHN2 52 aa1.37□□□□□ -2.19
SNX13-209ENST00000492626 TRBV10-1A0A0K0K1A3 114 aa1.36□□□□□ -2.19
SNX13-209ENST00000492626 TRBV10-3A0A0K0K1G6 114 aa1.36□□□□□ -2.19
SNX13-209ENST00000492626 LCE3AQ5TA76 89 aa1.36□□□□□ -2.19
SNX13-209ENST00000492626 CHKB-CPT1BH3BT56 60 aa1.36□□□□□ -2.19
SNX13-209ENST00000492626 K7EIM0 57 aa1.36□□□□□ -2.19
SNX13-209ENST00000492626 CDKN2A-AS1Q9UH64 79 aa1.36□□□□□ -2.19
SNX13-209ENST00000492626 SYNE2Q8WXH0 6885 aaKnown RBP1.35□□□□□ -2.19
SNX13-209ENST00000492626 COX6CP09669 75 aa1.35□□□□□ -2.19
SNX13-209ENST00000492626 BCE1O60756 84 aa1.35□□□□□ -2.19
SNX13-209ENST00000492626 ATP5EP56381 51 aaPredicted RBP1.35□□□□□ -2.19
SNX13-209ENST00000492626 NDUFC1O43677 76 aa1.35□□□□□ -2.19
SNX13-209ENST00000492626 A0A087WSZ3 146 aa1.34□□□□□ -2.19
SNX13-209ENST00000492626 TRAV21A0A0B4J279 112 aa1.34□□□□□ -2.19
SNX13-209ENST00000492626 PIGBOS1A0A0B4J2F0 54 aa1.34□□□□□ -2.19
SNX13-209ENST00000492626 LOC101927531A0A1B0GV80 90 aa1.34□□□□□ -2.19
SNX13-209ENST00000492626 NDUFA1O15239 70 aa1.34□□□□□ -2.19
SNX13-209ENST00000492626 CSAG1Q6PB30 78 aa1.34□□□□□ -2.19
SNX13-209ENST00000492626 PRR15LQ9BU68 103 aa1.34□□□□□ -2.19
SNX13-209ENST00000492626 TRBV6-4A0A1B0GX49 114 aa1.34□□□□□ -2.19
SNX13-209ENST00000492626 KRTAP13-4Q3LI77 160 aa1.34□□□□□ -2.19
SNX13-209ENST00000492626 ATP5EP2Q5VTU8 51 aa1.34□□□□□ -2.19
SNX13-209ENST00000492626 CYP4F30PQ9H0H9 118 aa1.34□□□□□ -2.19
SNX13-209ENST00000492626 MGPP08493 103 aa1.34□□□□□ -2.2
SNX13-209ENST00000492626 C9orf116Q5BN46 136 aaPredicted RBP1.34□□□□□ -2.2
SNX13-209ENST00000492626 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.34□□□□□ -2.2
SNX13-209ENST00000492626 M0QY20 66 aa1.33□□□□□ -2.2
SNX13-209ENST00000492626 TMEM167AQ8TBQ9 72 aa1.33□□□□□ -2.2
SNX13-209ENST00000492626 HAMPP81172 84 aa1.33□□□□□ -2.2
SNX13-209ENST00000492626 SPANXN1Q5VSR9 72 aa1.33□□□□□ -2.2
SNX13-209ENST00000492626 FLG2Q5D862 2391 aaPredicted RBP1.33□□□□□ -2.2
SNX13-209ENST00000492626 UNQ6190/PRO20217Q6UXQ8 127 aa1.33□□□□□ -2.2
SNX13-209ENST00000492626 WFDC10AQ9H1F0 79 aa1.33□□□□□ -2.2
SNX13-209ENST00000492626 LOC110117498A0A087WWA1 95 aa1.32□□□□□ -2.2
SNX13-209ENST00000492626 G3V318 75 aa1.32□□□□□ -2.2
SNX13-209ENST00000492626 LIMD2Q9BT23 127 aa1.32□□□□□ -2.2
SNX13-209ENST00000492626 LPAP08519 4548 aa1.32□□□□□ -2.2
SNX13-209ENST00000492626 A0A096LPF7 62 aa1.32□□□□□ -2.2
SNX13-209ENST00000492626 COPS9Q8WXC6 57 aa1.32□□□□□ -2.2
SNX13-209ENST00000492626 AHNAK2Q8IVF2 5795 aa1.32□□□□□ -2.2
SNX13-209ENST00000492626 JMJD7-PLA2G4BH0Y9G9 81 aa1.31□□□□□ -2.2
SNX13-209ENST00000492626 KRTAP12-1P59990 96 aa1.31□□□□□ -2.2
SNX13-209ENST00000492626 MIR22HGQ0VDD5 57 aa1.31□□□□□ -2.2
SNX13-209ENST00000492626 PCOTHQ58A44 107 aa1.31□□□□□ -2.2
SNX13-209ENST00000492626 KMT2DO14686 5537 aa1.31□□□□□ -2.2
SNX13-209ENST00000492626 UBL5Q9BZL1 73 aa1.31□□□□□ -2.2
SNX13-209ENST00000492626 PRO0255Q9UI72 69 aa1.31□□□□□ -2.2
SNX13-209ENST00000492626 ANGP03950 147 aaKnown RBP1.3□□□□□ -2.2
SNX13-209ENST00000492626 FAM74A4Q5TZK3 123 aa1.3□□□□□ -2.2
SNX13-209ENST00000492626 PDE6GP18545 87 aa1.3□□□□□ -2.2
SNX13-209ENST00000492626 INE1O15225 51 aa1.29□□□□□ -2.2
SNX13-209ENST00000492626 KRTAP26-1Q6PEX3 210 aa1.29□□□□□ -2.2
SNX13-209ENST00000492626 COX7B2Q8TF08 81 aa1.29□□□□□ -2.2
SNX13-209ENST00000492626 LINC01558Q9Y6Z2 57 aa1.29□□□□□ -2.2
SNX13-209ENST00000492626 FCGBPQ9Y6R7 5405 aaPredicted RBP1.29□□□□□ -2.2
SNX13-209ENST00000492626 K7EQZ3 153 aa1.28□□□□□ -2.2
SNX13-209ENST00000492626 DEFB131AP59861 70 aa1.28□□□□□ -2.2
SNX13-209ENST00000492626 LINC00575Q6W349 94 aa1.28□□□□□ -2.2
SNX13-209ENST00000492626 M0R2T5 61 aa1.28□□□□□ -2.2
SNX13-209ENST00000492626 SPRR2DP22532 72 aa1.28□□□□□ -2.2
SNX13-209ENST00000492626 LINC00158P58513 81 aa1.28□□□□□ -2.2
SNX13-209ENST00000492626 LINC00208Q96KT6 92 aa1.28□□□□□ -2.2
SNX13-209ENST00000492626 FSIP2Q5CZC0 6907 aa1.28□□□□□ -2.2
SNX13-209ENST00000492626 H0YGX0 51 aa1.28□□□□□ -2.21
SNX13-209ENST00000492626 SPRR2EP22531 72 aa1.28□□□□□ -2.21
SNX13-209ENST00000492626 SPRR2BP35325 72 aa1.28□□□□□ -2.21
SNX13-209ENST00000492626 SPRR2AP35326 72 aa1.28□□□□□ -2.21
SNX13-209ENST00000492626 KRTAP13-1Q8IUC0 172 aa1.28□□□□□ -2.21
SNX13-209ENST00000492626 RHPN1-AS1Q9BWJ2 59 aa1.28□□□□□ -2.21
SNX13-209ENST00000492626 LINC00472Q9H8W2 130 aa1.27□□□□□ -2.21
SNX13-209ENST00000492626 KRTAP12-3P60328 96 aa1.27□□□□□ -2.21
SNX13-209ENST00000492626 Q6ZQY7 126 aa1.27□□□□□ -2.21
SNX13-209ENST00000492626 KCNQ1DNQ9H478 68 aa1.27□□□□□ -2.21
SNX13-209ENST00000492626 CRIPTQ9P021 101 aa1.27□□□□□ -2.21
SNX13-209ENST00000492626 SPRR4Q96PI1 79 aa1.26□□□□□ -2.21
SNX13-209ENST00000492626 ETDCA0A1B0GVM5 59 aa1.25□□□□□ -2.21
SNX13-209ENST00000492626 KRTAP5-8O75690 187 aa1.25□□□□□ -2.21
SNX13-209ENST00000492626 ELOF1P60002 83 aaKnown RBP1.25□□□□□ -2.21
SNX13-209ENST00000492626 PPP1R17O96001 155 aa1.25□□□□□ -2.21
SNX13-209ENST00000492626 HTN3P15516 51 aa1.24□□□□□ -2.21
SNX13-209ENST00000492626 SPATA8Q6RVD6 105 aa1.24□□□□□ -2.21
SNX13-209ENST00000492626 DEFB4AO15263 64 aa1.24□□□□□ -2.21
SNX13-209ENST00000492626 COX7BP24311 80 aa1.24□□□□□ -2.21
SNX13-209ENST00000492626 TOMM7Q9P0U1 55 aa1.23□□□□□ -2.21
SNX13-209ENST00000492626 MT2AP02795 61 aa1.23□□□□□ -2.21
SNX13-209ENST00000492626 LENEPQ9Y5L5 61 aa1.23□□□□□ -2.21
SNX13-209ENST00000492626 SPAG11BQ08648 103 aa1.23□□□□□ -2.21
SNX13-209ENST00000492626 SPINK13Q1W4C9 94 aa1.23□□□□□ -2.21
SNX13-209ENST00000492626 DMAC1Q96GE9 116 aa1.23□□□□□ -2.21
SNX13-209ENST00000492626 WFDC13Q8IUB5 93 aa1.22□□□□□ -2.21
SNX13-209ENST00000492626 H0Y9P7 68 aa1.22□□□□□ -2.21
SNX13-209ENST00000492626 COX6B2Q6YFQ2 88 aa1.22□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms