RNA–Protein interactions for RNA: ENST00000483326.1

LTN1-205, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 2

Gene LTN1, Length 1,753 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-205ENST00000483326 PRLHP81277 87 aa2.26□□□□□ -2.05
LTN1-205ENST00000483326 PRKDCP78527 4128 aaKnown RBP2.26□□□□□ -2.05
LTN1-205ENST00000483326 MEGF8Q7Z7M0 2845 aa2.26□□□□□ -2.05
LTN1-205ENST00000483326 A0A096LNI7 61 aa2.25□□□□□ -2.05
LTN1-205ENST00000483326 HTN3P15516 51 aa2.25□□□□□ -2.05
LTN1-205ENST00000483326 K7EIL1 84 aa2.24□□□□□ -2.05
LTN1-205ENST00000483326 RPL37P61927 97 aaKnown RBP2.24□□□□□ -2.05
LTN1-205ENST00000483326 LINC01556Q5JQF7 62 aa2.24□□□□□ -2.05
LTN1-205ENST00000483326 SPINK1P00995 79 aa2.23□□□□□ -2.05
LTN1-205ENST00000483326 ALMS1Q8TCU4 4167 aa2.22□□□□□ -2.05
LTN1-205ENST00000483326 DNAH9Q9NYC9 4486 aa2.22□□□□□ -2.05
LTN1-205ENST00000483326 TENM3Q9P273 2699 aa2.22□□□□□ -2.05
LTN1-205ENST00000483326 TPRXLQ17RH7 258 aa2.21□□□□□ -2.06
LTN1-205ENST00000483326 STAB2Q8WWQ8 2551 aa2.2□□□□□ -2.06
LTN1-205ENST00000483326 COL7A1Q02388 2944 aa2.2□□□□□ -2.06
LTN1-205ENST00000483326 OBSCNQ5VST9 7968 aa2.2□□□□□ -2.06
LTN1-205ENST00000483326 NBEAL2Q6ZNJ1 2754 aa2.2□□□□□ -2.06
LTN1-205ENST00000483326 DNAH7Q8WXX0 4024 aa2.2□□□□□ -2.06
LTN1-205ENST00000483326 KRTAP13-2Q52LG2 175 aa2.19□□□□□ -2.06
LTN1-205ENST00000483326 SPINK6Q6UWN8 80 aa2.19□□□□□ -2.06
LTN1-205ENST00000483326 PLAC4Q8WY50 150 aa2.19□□□□□ -2.06
LTN1-205ENST00000483326 KRTAP4-3Q9BYR4 195 aa2.19□□□□□ -2.06
LTN1-205ENST00000483326 DEFB135Q30KP9 77 aa2.18□□□□□ -2.06
LTN1-205ENST00000483326 HUWE1Q7Z6Z7 4374 aaKnown RBP2.18□□□□□ -2.06
LTN1-205ENST00000483326 DEFB4AO15263 64 aa2.18□□□□□ -2.06
LTN1-205ENST00000483326 TENM2Q9NT68 2774 aa2.16□□□□□ -2.06
LTN1-205ENST00000483326 LCE3EQ5T5B0 92 aa2.15□□□□□ -2.06
LTN1-205ENST00000483326 KRTAP12-2P59991 146 aa2.15□□□□□ -2.07
LTN1-205ENST00000483326 LCE3AQ5TA76 89 aa2.15□□□□□ -2.07
LTN1-205ENST00000483326 DYNC2H1Q8NCM8 4307 aaKnown RBP2.13□□□□□ -2.07
LTN1-205ENST00000483326 KRTAP5-2Q701N4 177 aa2.13□□□□□ -2.07
LTN1-205ENST00000483326 KRTAP13-1Q8IUC0 172 aa2.13□□□□□ -2.07
LTN1-205ENST00000483326 UBE2DNLQ8IWF7 75 aa2.13□□□□□ -2.07
LTN1-205ENST00000483326 C10orf95Q9H7T3 257 aa2.13□□□□□ -2.07
LTN1-205ENST00000483326 APLNQ9ULZ1 77 aa2.13□□□□□ -2.07
LTN1-205ENST00000483326 SPACA4Q8TDM5 124 aa2.13□□□□□ -2.07
LTN1-205ENST00000483326 LYSTQ99698 3801 aa2.12□□□□□ -2.07
LTN1-205ENST00000483326 PLECQ15149 4684 aaKnown RBP2.12□□□□□ -2.07
LTN1-205ENST00000483326 DNAH1Q9P2D7 4330 aa2.12□□□□□ -2.07
LTN1-205ENST00000483326 KMT2CQ8NEZ4 4911 aaKnown RBP2.11□□□□□ -2.07
LTN1-205ENST00000483326 SACSQ9NZJ4 4579 aa2.11□□□□□ -2.07
LTN1-205ENST00000483326 FLG2Q5D862 2391 aaPredicted RBP2.11□□□□□ -2.07
LTN1-205ENST00000483326 CSMD3Q7Z407 3707 aa2.11□□□□□ -2.07
LTN1-205ENST00000483326 STARD9Q9P2P6 4700 aa2.11□□□□□ -2.07
LTN1-205ENST00000483326 DNAH6Q9C0G6 4158 aa2.1□□□□□ -2.07
LTN1-205ENST00000483326 S4R3F8 94 aa2.09□□□□□ -2.07
LTN1-205ENST00000483326 A0A0D9SG42 100 aa2.08□□□□□ -2.08
LTN1-205ENST00000483326 VPS13DQ5THJ4 4388 aa2.08□□□□□ -2.08
LTN1-205ENST00000483326 INE1O15225 51 aa2.08□□□□□ -2.08
LTN1-205ENST00000483326 KMT2AQ03164 3969 aa2.08□□□□□ -2.08
LTN1-205ENST00000483326 Q6ZRN7 208 aaPredicted RBP2.08□□□□□ -2.08
LTN1-205ENST00000483326 RYR2Q92736 4967 aa2.07□□□□□ -2.08
LTN1-205ENST00000483326 RYR3Q15413 4870 aa2.07□□□□□ -2.08
LTN1-205ENST00000483326 KRTAP10-8P60410 259 aa2.06□□□□□ -2.08
LTN1-205ENST00000483326 DNAH10Q8IVF4 4471 aa2.06□□□□□ -2.08
LTN1-205ENST00000483326 PP632Q6XCG6 107 aa2.05□□□□□ -2.08
LTN1-205ENST00000483326 DNAH17Q9UFH2 4485 aa2.04□□□□□ -2.08
LTN1-205ENST00000483326 HYDINQ4G0P3 5121 aa2.04□□□□□ -2.08
LTN1-205ENST00000483326 FRAS1Q86XX4 4008 aa2.04□□□□□ -2.08
LTN1-205ENST00000483326 HECTD4Q9Y4D8 3996 aa2.03□□□□□ -2.08
LTN1-205ENST00000483326 DNAH2Q9P225 4427 aa2.03□□□□□ -2.09
LTN1-205ENST00000483326 BIRC6Q9NR09 4857 aa2.02□□□□□ -2.09
LTN1-205ENST00000483326 M0QZ58 72 aa2□□□□□ -2.09
LTN1-205ENST00000483326 PKHD1P08F94 4074 aa1.99□□□□□ -2.09
LTN1-205ENST00000483326 FAT2Q9NYQ8 4349 aa1.99□□□□□ -2.09
LTN1-205ENST00000483326 DNAH11Q96DT5 4516 aa1.99□□□□□ -2.09
LTN1-205ENST00000483326 EPPK1P58107 5090 aaKnown RBP1.99□□□□□ -2.09
LTN1-205ENST00000483326 DYNC1H1Q14204 4646 aaKnown RBP1.98□□□□□ -2.09
LTN1-205ENST00000483326 KRTAP12-1P59990 96 aa1.98□□□□□ -2.09
LTN1-205ENST00000483326 PKD1P98161 4303 aa1.98□□□□□ -2.09
LTN1-205ENST00000483326 KRTAP13-4Q3LI77 160 aa1.98□□□□□ -2.09
LTN1-205ENST00000483326 HMCN1Q96RW7 5635 aa1.97□□□□□ -2.09
LTN1-205ENST00000483326 SPRR5A0A1B0GTR4 108 aa1.96□□□□□ -2.1
LTN1-205ENST00000483326 RPS29P62273 56 aaKnown RBP1.96□□□□□ -2.1
LTN1-205ENST00000483326 SRRM2Q9UQ35 2752 aaKnown RBP1.96□□□□□ -2.1
LTN1-205ENST00000483326 KRTAP5-5Q701N2 237 aaPredicted RBP1.95□□□□□ -2.1
LTN1-205ENST00000483326 LRP1BQ9NZR2 4599 aa1.95□□□□□ -2.1
LTN1-205ENST00000483326 DNAH5Q8TE73 4624 aa1.95□□□□□ -2.1
LTN1-205ENST00000483326 HERC2O95714 4834 aa1.94□□□□□ -2.1
LTN1-205ENST00000483326 RYR1P21817 5038 aa1.94□□□□□ -2.1
LTN1-205ENST00000483326 HSPG2P98160 4391 aa1.93□□□□□ -2.1
LTN1-205ENST00000483326 VPS13BQ7Z7G8 4022 aa1.93□□□□□ -2.1
LTN1-205ENST00000483326 DNAH8Q96JB1 4490 aa1.92□□□□□ -2.1
LTN1-205ENST00000483326 APOBP04114 4563 aaKnown RBP1.92□□□□□ -2.1
LTN1-205ENST00000483326 KIAA1109Q2LD37 5005 aa1.92□□□□□ -2.1
LTN1-205ENST00000483326 DMBT1Q9UGM3 2413 aaPredicted RBP1.9□□□□□ -2.11
LTN1-205ENST00000483326 KRTAP10-1P60331 282 aa1.89□□□□□ -2.11
LTN1-205ENST00000483326 FAT1Q14517 4588 aa1.88□□□□□ -2.11
LTN1-205ENST00000483326 LCE1CQ5T751 118 aa1.88□□□□□ -2.11
LTN1-205ENST00000483326 LCE1BQ5T7P3 118 aa1.88□□□□□ -2.11
LTN1-205ENST00000483326 Q5VSD8 79 aa1.87□□□□□ -2.11
LTN1-205ENST00000483326 SMR3BP02814 79 aaPredicted RBP1.87□□□□□ -2.11
LTN1-205ENST00000483326 PCLOQ9Y6V0 5065 aa1.87□□□□□ -2.11
LTN1-205ENST00000483326 ABCA13Q86UQ4 5058 aa1.86□□□□□ -2.11
LTN1-205ENST00000483326 PKHD1L1Q86WI1 4243 aa1.85□□□□□ -2.11
LTN1-205ENST00000483326 C9orf92A6NGG3 77 aa1.85□□□□□ -2.11
LTN1-205ENST00000483326 MYCBP2O75592 4640 aa1.83□□□□□ -2.12
LTN1-205ENST00000483326 FAT3Q8TDW7 4589 aa1.82□□□□□ -2.12
LTN1-205ENST00000483326 KRTAP5-8O75690 187 aa1.82□□□□□ -2.12
LTN1-205ENST00000483326 HERC1Q15751 4861 aa1.82□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 200 ms