RNA–Protein interactions for RNA: ENST00000480737.1

FN1-221, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 384 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-221ENST00000480737 CDC42SE1Q9NRR8 79 aa1.52□□□□□ -2.17
FN1-221ENST00000480737 MEGF8Q7Z7M0 2845 aa1.52□□□□□ -2.17
FN1-221ENST00000480737 TENM3Q9P273 2699 aa1.52□□□□□ -2.17
FN1-221ENST00000480737 P0C880 135 aa1.51□□□□□ -2.17
FN1-221ENST00000480737 COA5Q86WW8 74 aa1.51□□□□□ -2.17
FN1-221ENST00000480737 NOTCH1P46531 2555 aa1.51□□□□□ -2.17
FN1-221ENST00000480737 COL7A1Q02388 2944 aa1.5□□□□□ -2.17
FN1-221ENST00000480737 STAB2Q8WWQ8 2551 aa1.5□□□□□ -2.17
FN1-221ENST00000480737 CHKB-CPT1BH3BT56 60 aa1.5□□□□□ -2.17
FN1-221ENST00000480737 LY6G6CO95867 125 aa1.5□□□□□ -2.17
FN1-221ENST00000480737 SPINK6Q6UWN8 80 aa1.5□□□□□ -2.17
FN1-221ENST00000480737 Q6ZSA8 131 aa1.5□□□□□ -2.17
FN1-221ENST00000480737 LINC01558Q9Y6Z2 57 aa1.5□□□□□ -2.17
FN1-221ENST00000480737 MGAM2Q2M2H8 2515 aa1.49□□□□□ -2.17
FN1-221ENST00000480737 A0A0G2JQZ4 141 aa1.49□□□□□ -2.17
FN1-221ENST00000480737 SPINT4Q6UDR6 99 aa1.49□□□□□ -2.17
FN1-221ENST00000480737 DMAC1Q96GE9 116 aa1.49□□□□□ -2.17
FN1-221ENST00000480737 PCOTHQ58A44 107 aa1.48□□□□□ -2.17
FN1-221ENST00000480737 Q5VV11 94 aa1.48□□□□□ -2.17
FN1-221ENST00000480737 R4GN34 69 aa1.48□□□□□ -2.17
FN1-221ENST00000480737 TENM2Q9NT68 2774 aa1.47□□□□□ -2.17
FN1-221ENST00000480737 TRRAPQ9Y4A5 3859 aa1.47□□□□□ -2.17
FN1-221ENST00000480737 ANK2Q01484 3957 aa1.47□□□□□ -2.17
FN1-221ENST00000480737 SRRM2Q9UQ35 2752 aaKnown RBP1.47□□□□□ -2.17
FN1-221ENST00000480737 HRES1P13985 223 aa1.47□□□□□ -2.17
FN1-221ENST00000480737 DNAH3Q8TD57 4116 aa1.47□□□□□ -2.17
FN1-221ENST00000480737 A0A1B0GU69 56 aa1.46□□□□□ -2.18
FN1-221ENST00000480737 KRTAP12-4P60329 112 aa1.46□□□□□ -2.18
FN1-221ENST00000480737 CSAG1Q6PB30 78 aa1.46□□□□□ -2.18
FN1-221ENST00000480737 LINC00304Q8N9R0 145 aa1.46□□□□□ -2.18
FN1-221ENST00000480737 PRO2289Q9P1D8 64 aa1.46□□□□□ -2.18
FN1-221ENST00000480737 FBN3Q75N90 2809 aa1.46□□□□□ -2.18
FN1-221ENST00000480737 UQCR11O14957 56 aa1.45□□□□□ -2.18
FN1-221ENST00000480737 KRTAP13-2Q52LG2 175 aa1.45□□□□□ -2.18
FN1-221ENST00000480737 SPATA8Q6RVD6 105 aa1.43□□□□□ -2.18
FN1-221ENST00000480737 TGP01266 2768 aa1.43□□□□□ -2.18
FN1-221ENST00000480737 DYNC2H1Q8NCM8 4307 aaKnown RBP1.41□□□□□ -2.18
FN1-221ENST00000480737 DNAH1Q9P2D7 4330 aa1.41□□□□□ -2.18
FN1-221ENST00000480737 SPINK7P58062 85 aa1.4□□□□□ -2.19
FN1-221ENST00000480737 CSMD3Q7Z407 3707 aa1.39□□□□□ -2.19
FN1-221ENST00000480737 TPRXLQ17RH7 258 aa1.39□□□□□ -2.19
FN1-221ENST00000480737 COX6B2Q6YFQ2 88 aa1.39□□□□□ -2.19
FN1-221ENST00000480737 CRCT1Q9UGL9 99 aa1.39□□□□□ -2.19
FN1-221ENST00000480737 DNHD1Q96M86 4753 aa1.39□□□□□ -2.19
FN1-221ENST00000480737 HUWE1Q7Z6Z7 4374 aaKnown RBP1.39□□□□□ -2.19
FN1-221ENST00000480737 LYSTQ99698 3801 aa1.38□□□□□ -2.19
FN1-221ENST00000480737 CMYA5Q8N3K9 4069 aa1.37□□□□□ -2.19
FN1-221ENST00000480737 VPS13DQ5THJ4 4388 aa1.37□□□□□ -2.19
FN1-221ENST00000480737 KRTAP10-4P60372 401 aaPredicted RBP1.37□□□□□ -2.19
FN1-221ENST00000480737 DNAH9Q9NYC9 4486 aa1.36□□□□□ -2.19
FN1-221ENST00000480737 SMR3BP02814 79 aaPredicted RBP1.36□□□□□ -2.19
FN1-221ENST00000480737 KRTAP12-3P60328 96 aa1.36□□□□□ -2.19
FN1-221ENST00000480737 RPL37P61927 97 aaKnown RBP1.36□□□□□ -2.19
FN1-221ENST00000480737 PRKDCP78527 4128 aaKnown RBP1.36□□□□□ -2.19
FN1-221ENST00000480737 H1FX-AS1Q4G0G2 97 aa1.36□□□□□ -2.19
FN1-221ENST00000480737 DNAH7Q8WXX0 4024 aa1.35□□□□□ -2.19
FN1-221ENST00000480737 HECTD4Q9Y4D8 3996 aa1.35□□□□□ -2.19
FN1-221ENST00000480737 C9orf92A6NGG3 77 aa1.35□□□□□ -2.19
FN1-221ENST00000480737 PLECQ15149 4684 aaKnown RBP1.35□□□□□ -2.19
FN1-221ENST00000480737 DNAH10Q8IVF4 4471 aa1.34□□□□□ -2.19
FN1-221ENST00000480737 Q5VSD8 79 aa1.34□□□□□ -2.19
FN1-221ENST00000480737 STARD9Q9P2P6 4700 aa1.33□□□□□ -2.2
FN1-221ENST00000480737 S4R3F8 94 aa1.33□□□□□ -2.2
FN1-221ENST00000480737 H0YAA0 97 aa1.32□□□□□ -2.2
FN1-221ENST00000480737 M0QZ58 72 aa1.32□□□□□ -2.2
FN1-221ENST00000480737 DNAH17Q9UFH2 4485 aa1.32□□□□□ -2.2
FN1-221ENST00000480737 PKD1P98161 4303 aa1.31□□□□□ -2.2
FN1-221ENST00000480737 DNAH2Q9P225 4427 aa1.31□□□□□ -2.2
FN1-221ENST00000480737 ALMS1Q8TCU4 4167 aa1.31□□□□□ -2.2
FN1-221ENST00000480737 INE1O15225 51 aa1.31□□□□□ -2.2
FN1-221ENST00000480737 KRTAP4-1Q9BYQ7 146 aa1.31□□□□□ -2.2
FN1-221ENST00000480737 LRP1BQ9NZR2 4599 aa1.3□□□□□ -2.2
FN1-221ENST00000480737 KRTAP6-3Q3LI67 103 aa1.3□□□□□ -2.2
FN1-221ENST00000480737 DNAH6Q9C0G6 4158 aa1.3□□□□□ -2.2
FN1-221ENST00000480737 DNAH8Q96JB1 4490 aa1.3□□□□□ -2.2
FN1-221ENST00000480737 CRIPTQ9P021 101 aa1.28□□□□□ -2.2
FN1-221ENST00000480737 DNAH11Q96DT5 4516 aa1.28□□□□□ -2.21
FN1-221ENST00000480737 KMT2AQ03164 3969 aa1.27□□□□□ -2.21
FN1-221ENST00000480737 MT1HL1P0DM35 61 aa1.27□□□□□ -2.21
FN1-221ENST00000480737 FRAS1Q86XX4 4008 aa1.26□□□□□ -2.21
FN1-221ENST00000480737 FAT2Q9NYQ8 4349 aa1.26□□□□□ -2.21
FN1-221ENST00000480737 DNAH5Q8TE73 4624 aa1.25□□□□□ -2.21
FN1-221ENST00000480737 VPS13BQ7Z7G8 4022 aa1.24□□□□□ -2.21
FN1-221ENST00000480737 FLG2Q5D862 2391 aaPredicted RBP1.24□□□□□ -2.21
FN1-221ENST00000480737 A0A0D9SG42 100 aa1.24□□□□□ -2.21
FN1-221ENST00000480737 KRTAP12-1P59990 96 aa1.23□□□□□ -2.21
FN1-221ENST00000480737 KMT2CQ8NEZ4 4911 aaKnown RBP1.23□□□□□ -2.21
FN1-221ENST00000480737 DYNC1H1Q14204 4646 aaKnown RBP1.23□□□□□ -2.21
FN1-221ENST00000480737 SACSQ9NZJ4 4579 aa1.23□□□□□ -2.21
FN1-221ENST00000480737 FCGBPQ9Y6R7 5405 aaPredicted RBP1.22□□□□□ -2.21
FN1-221ENST00000480737 PKHD1P08F94 4074 aa1.22□□□□□ -2.21
FN1-221ENST00000480737 KRTAP13-4Q3LI77 160 aa1.22□□□□□ -2.21
FN1-221ENST00000480737 RYR2Q92736 4967 aa1.21□□□□□ -2.21
FN1-221ENST00000480737 PKHD1L1Q86WI1 4243 aa1.21□□□□□ -2.22
FN1-221ENST00000480737 APOBP04114 4563 aaKnown RBP1.21□□□□□ -2.22
FN1-221ENST00000480737 HYDINQ4G0P3 5121 aa1.2□□□□□ -2.22
FN1-221ENST00000480737 PLAC4Q8WY50 150 aa1.2□□□□□ -2.22
FN1-221ENST00000480737 RYR3Q15413 4870 aa1.19□□□□□ -2.22
FN1-221ENST00000480737 BIRC6Q9NR09 4857 aa1.19□□□□□ -2.22
FN1-221ENST00000480737 FAT3Q8TDW7 4589 aa1.18□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms