RNA–Protein interactions for RNA: ENST00000479446.5

ABCA2-217, Transcript of ATP binding cassette subfamily A member 2, humanhuman

TSL 1 (best)

Gene ABCA2, Length 6,295 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA2-217ENST00000479446 ALMS1Q8TCU4 4167 aa8.16□□□□□ -1.1
ABCA2-217ENST00000479446 DNAH5Q8TE73 4624 aa8.11□□□□□ -1.11
ABCA2-217ENST00000479446 VPS13CQ709C8 3753 aa8.09□□□□□ -1.11
ABCA2-217ENST00000479446 DNAH9Q9NYC9 4486 aa8.01□□□□□ -1.13
ABCA2-217ENST00000479446 DNAH10Q8IVF4 4471 aa7.98□□□□□ -1.13
ABCA2-217ENST00000479446 CSMD3Q7Z407 3707 aa7.96□□□□□ -1.14
ABCA2-217ENST00000479446 PLECQ15149 4684 aaKnown RBP7.96□□□□□ -1.14
ABCA2-217ENST00000479446 KRTAP4-1Q9BYQ7 146 aa7.94□□□□□ -1.14
ABCA2-217ENST00000479446 DNAH1Q9P2D7 4330 aa7.89□□□□□ -1.15
ABCA2-217ENST00000479446 KRTAP8-1Q8IUC2 63 aa7.88□□□□□ -1.15
ABCA2-217ENST00000479446 DNAH11Q96DT5 4516 aa7.87□□□□□ -1.15
ABCA2-217ENST00000479446 KRTAP10-5P60370 271 aa7.84□□□□□ -1.15
ABCA2-217ENST00000479446 DNAH2Q9P225 4427 aa7.79□□□□□ -1.16
ABCA2-217ENST00000479446 MT1HP80294 61 aa7.78□□□□□ -1.16
ABCA2-217ENST00000479446 SPRR2GQ9BYE4 73 aa7.78□□□□□ -1.16
ABCA2-217ENST00000479446 FAT1Q14517 4588 aa7.77□□□□□ -1.17
ABCA2-217ENST00000479446 MT2AP02795 61 aa7.74□□□□□ -1.17
ABCA2-217ENST00000479446 DNAH17Q9UFH2 4485 aa7.73□□□□□ -1.17
ABCA2-217ENST00000479446 VPS13DQ5THJ4 4388 aa7.68□□□□□ -1.18
ABCA2-217ENST00000479446 DYNC1H1Q14204 4646 aaKnown RBP7.66□□□□□ -1.18
ABCA2-217ENST00000479446 ZNF469Q96JG9 3925 aaPredicted RBP7.62□□□□□ -1.19
ABCA2-217ENST00000479446 AKAP9Q99996 3911 aa7.61□□□□□ -1.19
ABCA2-217ENST00000479446 DNHD1Q96M86 4753 aa7.6□□□□□ -1.19
ABCA2-217ENST00000479446 DNAH8Q96JB1 4490 aa7.57□□□□□ -1.2
ABCA2-217ENST00000479446 MT1FP04733 61 aa7.57□□□□□ -1.2
ABCA2-217ENST00000479446 LRP1BQ9NZR2 4599 aa7.55□□□□□ -1.2
ABCA2-217ENST00000479446 RYR1P21817 5038 aa7.51□□□□□ -1.21
ABCA2-217ENST00000479446 SACSQ9NZJ4 4579 aa7.49□□□□□ -1.21
ABCA2-217ENST00000479446 KRTAP19-5Q3LI72 72 aa7.48□□□□□ -1.21
ABCA2-217ENST00000479446 LCE3CQ5T5A8 94 aa7.42□□□□□ -1.22
ABCA2-217ENST00000479446 STARD9Q9P2P6 4700 aa7.39□□□□□ -1.23
ABCA2-217ENST00000479446 DYNC2H1Q8NCM8 4307 aaKnown RBP7.39□□□□□ -1.23
ABCA2-217ENST00000479446 FAT2Q9NYQ8 4349 aa7.37□□□□□ -1.23
ABCA2-217ENST00000479446 APOBP04114 4563 aaKnown RBP7.34□□□□□ -1.24
ABCA2-217ENST00000479446 KRTAP19-4Q3LI73 84 aa7.33□□□□□ -1.24
ABCA2-217ENST00000479446 DNAH3Q8TD57 4116 aa7.31□□□□□ -1.24
ABCA2-217ENST00000479446 KRTAP10-7P60409 375 aaPredicted RBP7.28□□□□□ -1.24
ABCA2-217ENST00000479446 SPRR2FQ96RM1 72 aa7.28□□□□□ -1.24
ABCA2-217ENST00000479446 KRTAP19-8Q3LI54 63 aa7.22□□□□□ -1.25
ABCA2-217ENST00000479446 KRTAP19-1Q8IUB9 90 aa7.22□□□□□ -1.25
ABCA2-217ENST00000479446 ANK2Q01484 3957 aa7.16□□□□□ -1.26
ABCA2-217ENST00000479446 RYR3Q15413 4870 aa7.11□□□□□ -1.27
ABCA2-217ENST00000479446 MYCBP2O75592 4640 aa7.09□□□□□ -1.27
ABCA2-217ENST00000479446 VPS13BQ7Z7G8 4022 aa7.09□□□□□ -1.28
ABCA2-217ENST00000479446 PRKDCP78527 4128 aaKnown RBP7.05□□□□□ -1.28
ABCA2-217ENST00000479446 KIAA1109Q2LD37 5005 aa7.04□□□□□ -1.28
ABCA2-217ENST00000479446 MT1XP80297 61 aa7.03□□□□□ -1.28
ABCA2-217ENST00000479446 KRTAP17-1Q9BYP8 105 aa7.02□□□□□ -1.29
ABCA2-217ENST00000479446 LRP1Q07954 4544 aaKnown RBP7.01□□□□□ -1.29
ABCA2-217ENST00000479446 KMT2AQ03164 3969 aa6.99□□□□□ -1.29
ABCA2-217ENST00000479446 FAT3Q8TDW7 4589 aa6.98□□□□□ -1.29
ABCA2-217ENST00000479446 MT1BP07438 61 aa6.94□□□□□ -1.3
ABCA2-217ENST00000479446 LYSTQ99698 3801 aa6.93□□□□□ -1.3
ABCA2-217ENST00000479446 RYR2Q92736 4967 aa6.93□□□□□ -1.3
ABCA2-217ENST00000479446 SPRR5A0A1B0GTR4 108 aa6.89□□□□□ -1.31
ABCA2-217ENST00000479446 KRTAP9-8Q9BYQ0 159 aa6.86□□□□□ -1.31
ABCA2-217ENST00000479446 SPRR2EP22531 72 aa6.85□□□□□ -1.31
ABCA2-217ENST00000479446 SPRR2BP35325 72 aa6.85□□□□□ -1.31
ABCA2-217ENST00000479446 SPRR2AP35326 72 aa6.85□□□□□ -1.31
ABCA2-217ENST00000479446 LCE3BQ5TA77 95 aa6.8□□□□□ -1.32
ABCA2-217ENST00000479446 DNAH6Q9C0G6 4158 aa6.79□□□□□ -1.32
ABCA2-217ENST00000479446 DNAH7Q8WXX0 4024 aa6.78□□□□□ -1.32
ABCA2-217ENST00000479446 MT1GP13640 62 aa6.76□□□□□ -1.33
ABCA2-217ENST00000479446 KRTAP12-4P60329 112 aa6.76□□□□□ -1.33
ABCA2-217ENST00000479446 LCE2CQ5TA81 110 aa6.73□□□□□ -1.33
ABCA2-217ENST00000479446 CMYA5Q8N3K9 4069 aa6.72□□□□□ -1.33
ABCA2-217ENST00000479446 HERC1Q15751 4861 aa6.72□□□□□ -1.33
ABCA2-217ENST00000479446 KRTAP4-8A0A0G2JLE6 195 aa6.71□□□□□ -1.33
ABCA2-217ENST00000479446 KRTAP4-8Q9BYQ9 185 aa6.71□□□□□ -1.33
ABCA2-217ENST00000479446 KRTAP9-3Q9BYQ3 159 aa6.71□□□□□ -1.34
ABCA2-217ENST00000479446 FRAS1Q86XX4 4008 aa6.69□□□□□ -1.34
ABCA2-217ENST00000479446 HSPG2P98160 4391 aa6.63□□□□□ -1.35
ABCA2-217ENST00000479446 HECTD4Q9Y4D8 3996 aa6.63□□□□□ -1.35
ABCA2-217ENST00000479446 SPRR2DP22532 72 aa6.62□□□□□ -1.35
ABCA2-217ENST00000479446 PKD1P98161 4303 aa6.62□□□□□ -1.35
ABCA2-217ENST00000479446 HERC2O95714 4834 aa6.61□□□□□ -1.35
ABCA2-217ENST00000479446 LRP2P98164 4655 aa6.59□□□□□ -1.35
ABCA2-217ENST00000479446 LCE2BO14633 110 aa6.56□□□□□ -1.36
ABCA2-217ENST00000479446 PCLOQ9Y6V0 5065 aa6.51□□□□□ -1.37
ABCA2-217ENST00000479446 LCE3DQ9BYE3 92 aa6.5□□□□□ -1.37
ABCA2-217ENST00000479446 LCE3EQ5T5B0 92 aa6.42□□□□□ -1.38
ABCA2-217ENST00000479446 BIRC6Q9NR09 4857 aa6.41□□□□□ -1.38
ABCA2-217ENST00000479446 KRTAP19-2Q3LHN2 52 aa6.41□□□□□ -1.38
ABCA2-217ENST00000479446 KRTAP19-3Q7Z4W3 81 aa6.41□□□□□ -1.38
ABCA2-217ENST00000479446 MT1LQ93083 61 aa6.4□□□□□ -1.39
ABCA2-217ENST00000479446 KRTAP4-7Q9BYR0 210 aa6.36□□□□□ -1.39
ABCA2-217ENST00000479446 HYDINQ4G0P3 5121 aa6.33□□□□□ -1.4
ABCA2-217ENST00000479446 MT1EP04732 61 aa6.33□□□□□ -1.4
ABCA2-217ENST00000479446 PKHD1L1Q86WI1 4243 aa6.27□□□□□ -1.41
ABCA2-217ENST00000479446 KMT2CQ8NEZ4 4911 aaKnown RBP6.27□□□□□ -1.41
ABCA2-217ENST00000479446 MUC17Q685J3 4493 aa6.25□□□□□ -1.41
ABCA2-217ENST00000479446 LPAP08519 4548 aa6.22□□□□□ -1.41
ABCA2-217ENST00000479446 EPPK1P58107 5090 aaKnown RBP6.21□□□□□ -1.41
ABCA2-217ENST00000479446 PKHD1P08F94 4074 aa6.2□□□□□ -1.42
ABCA2-217ENST00000479446 FLGP20930 4061 aaPredicted RBP6.13□□□□□ -1.43
ABCA2-217ENST00000479446 MT1MQ8N339 61 aa6.13□□□□□ -1.43
ABCA2-217ENST00000479446 LCE2DQ5TA82 110 aaPredicted RBP6.09□□□□□ -1.43
ABCA2-217ENST00000479446 ABCA13Q86UQ4 5058 aa6.08□□□□□ -1.44
ABCA2-217ENST00000479446 SYNE1Q8NF91 8797 aaKnown RBP6.07□□□□□ -1.44
ABCA2-217ENST00000479446 KRTAP19-6Q3LI70 58 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms