RNA–Protein interactions for RNA: ENST00000478743.1

HDAC8-217, Transcript of histone deacetylase 8, humanhuman

TSL 4

Gene HDAC8, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-217ENST00000478743 SNRPEP62304 92 aaKnown RBP4.46□□□□□ -1.7
HDAC8-217ENST00000478743 S100A2P29034 98 aa4.44□□□□□ -1.7
HDAC8-217ENST00000478743 MT1MQ8N339 61 aa4.43□□□□□ -1.7
HDAC8-217ENST00000478743 MUC5BQ9HC84 5762 aaPredicted RBP4.42□□□□□ -1.7
HDAC8-217ENST00000478743 HIST3H2BBQ8N257 126 aa4.42□□□□□ -1.7
HDAC8-217ENST00000478743 PRO1854Q9UHT4 67 aa4.42□□□□□ -1.7
HDAC8-217ENST00000478743 MT1GP13640 62 aa4.41□□□□□ -1.7
HDAC8-217ENST00000478743 COA6Q5JTJ3 125 aaKnown RBP4.41□□□□□ -1.7
HDAC8-217ENST00000478743 HIST1H2BLQ99880 126 aa4.41□□□□□ -1.7
HDAC8-217ENST00000478743 R4GN34 69 aa4.4□□□□□ -1.71
HDAC8-217ENST00000478743 LINC01554Q52M75 96 aa4.39□□□□□ -1.71
HDAC8-217ENST00000478743 M0QZ58 72 aa4.38□□□□□ -1.71
HDAC8-217ENST00000478743 P0C880 135 aa4.37□□□□□ -1.71
HDAC8-217ENST00000478743 CXCL6P80162 114 aa4.36□□□□□ -1.71
HDAC8-217ENST00000478743 CASC2Q6XLA1 102 aa4.36□□□□□ -1.71
HDAC8-217ENST00000478743 Q8N9L7 120 aa4.36□□□□□ -1.71
HDAC8-217ENST00000478743 HSBP1L1C9JCN9 74 aa4.35□□□□□ -1.71
HDAC8-217ENST00000478743 COX8AP10176 69 aa4.35□□□□□ -1.71
HDAC8-217ENST00000478743 FXYD2P54710 66 aa4.35□□□□□ -1.71
HDAC8-217ENST00000478743 NREPQ16612 68 aa4.35□□□□□ -1.71
HDAC8-217ENST00000478743 K7ERJ3 54 aa4.33□□□□□ -1.72
HDAC8-217ENST00000478743 PSMB2P49721 201 aa4.33□□□□□ -1.72
HDAC8-217ENST00000478743 LOC105371267A0A1B0GV96 52 aa4.32□□□□□ -1.72
HDAC8-217ENST00000478743 PP632Q6XCG6 107 aa4.32□□□□□ -1.72
HDAC8-217ENST00000478743 LOC110117498A0A087WWA1 95 aa4.31□□□□□ -1.72
HDAC8-217ENST00000478743 PYY3Q5JQD4 70 aa4.31□□□□□ -1.72
HDAC8-217ENST00000478743 NDUFC1O43677 76 aa4.3□□□□□ -1.72
HDAC8-217ENST00000478743 PAM16Q9Y3D7 125 aa4.3□□□□□ -1.72
HDAC8-217ENST00000478743 K7EP34 96 aa4.29□□□□□ -1.72
HDAC8-217ENST00000478743 BAALC-AS2P0C853 105 aa4.29□□□□□ -1.72
HDAC8-217ENST00000478743 A0A1B0GW54 56 aa4.28□□□□□ -1.72
HDAC8-217ENST00000478743 DLEU1O43261 78 aa4.28□□□□□ -1.72
HDAC8-217ENST00000478743 C14orf144Q96I85 54 aa4.28□□□□□ -1.72
HDAC8-217ENST00000478743 VAMP8Q9BV40 100 aa4.28□□□□□ -1.72
HDAC8-217ENST00000478743 KRTAP4-7Q9BYR0 210 aa4.28□□□□□ -1.72
HDAC8-217ENST00000478743 C14orf132Q9NPU4 83 aa4.28□□□□□ -1.72
HDAC8-217ENST00000478743 BPY2O14599 106 aa4.27□□□□□ -1.73
HDAC8-217ENST00000478743 KRTAP19-5Q3LI72 72 aa4.27□□□□□ -1.73
HDAC8-217ENST00000478743 SPATA45Q537H7 98 aa4.27□□□□□ -1.73
HDAC8-217ENST00000478743 HIGD1BQ9P298 99 aa4.27□□□□□ -1.73
HDAC8-217ENST00000478743 KRTAP4-11Q9BYQ6 195 aa4.26□□□□□ -1.73
HDAC8-217ENST00000478743 KRTAP5-8O75690 187 aa4.25□□□□□ -1.73
HDAC8-217ENST00000478743 MT1LQ93083 61 aa4.25□□□□□ -1.73
HDAC8-217ENST00000478743 C9orf118A6NHY6 69 aa4.24□□□□□ -1.73
HDAC8-217ENST00000478743 SMIM6P0DI80 62 aa4.24□□□□□ -1.73
HDAC8-217ENST00000478743 COX6CP09669 75 aa4.22□□□□□ -1.73
HDAC8-217ENST00000478743 JMJD7-PLA2G4BH0Y9G9 81 aa4.18□□□□□ -1.74
HDAC8-217ENST00000478743 CYP4F30PQ9H0H9 118 aa4.18□□□□□ -1.74
HDAC8-217ENST00000478743 UQCR10Q9UDW1 63 aa4.18□□□□□ -1.74
HDAC8-217ENST00000478743 PCP4L1A6NKN8 68 aa4.17□□□□□ -1.74
HDAC8-217ENST00000478743 TSTD3H0UI37 97 aa4.17□□□□□ -1.74
HDAC8-217ENST00000478743 KRTAP5-5Q701N2 237 aaPredicted RBP4.16□□□□□ -1.74
HDAC8-217ENST00000478743 BATFQ16520 125 aa4.14□□□□□ -1.75
HDAC8-217ENST00000478743 SYNE1Q8NF91 8797 aaKnown RBP4.14□□□□□ -1.75
HDAC8-217ENST00000478743 SCGB1C2P0DMR2 95 aa4.12□□□□□ -1.75
HDAC8-217ENST00000478743 HSD52Q0P140 79 aa4.12□□□□□ -1.75
HDAC8-217ENST00000478743 A0A1W2PPM0 123 aa4.11□□□□□ -1.75
HDAC8-217ENST00000478743 KRTAP12-4P60329 112 aa4.11□□□□□ -1.75
HDAC8-217ENST00000478743 C20orf197Q8N268 126 aa4.11□□□□□ -1.75
HDAC8-217ENST00000478743 M0R143 59 aa4.08□□□□□ -1.76
HDAC8-217ENST00000478743 NAA38Q9BRA0 125 aaKnown RBP4.07□□□□□ -1.76
HDAC8-217ENST00000478743 ATXN8Q156A1 80 aa4.04□□□□□ -1.76
HDAC8-217ENST00000478743 MT-ATP8P03928 68 aa4.03□□□□□ -1.76
HDAC8-217ENST00000478743 A0A0D9SG42 100 aa4.02□□□□□ -1.77
HDAC8-217ENST00000478743 KRTAP23-1A1A580 65 aa4.02□□□□□ -1.77
HDAC8-217ENST00000478743 KRTAP9-9Q9BYP9 154 aa4.01□□□□□ -1.77
HDAC8-217ENST00000478743 TAX1BP3O14907 124 aa4□□□□□ -1.77
HDAC8-217ENST00000478743 ACYP1P07311 99 aa4□□□□□ -1.77
HDAC8-217ENST00000478743 KRTAP5-2Q701N4 177 aa4□□□□□ -1.77
HDAC8-217ENST00000478743 TP53AIP1Q9HCN2 124 aa4□□□□□ -1.77
HDAC8-217ENST00000478743 COL5A1-AS1Q5SY13 56 aa3.99□□□□□ -1.77
HDAC8-217ENST00000478743 LOC100996750A0A140TA64 210 aa3.97□□□□□ -1.77
HDAC8-217ENST00000478743 TRAV22A0A0B4J277 110 aa3.96□□□□□ -1.78
HDAC8-217ENST00000478743 LOC101927531A0A1B0GV80 90 aa3.96□□□□□ -1.78
HDAC8-217ENST00000478743 OBSCNQ5VST9 7968 aa3.95□□□□□ -1.78
HDAC8-217ENST00000478743 SPCS1Q9Y6A9 102 aa3.94□□□□□ -1.78
HDAC8-217ENST00000478743 A0A1B0GV90 55 aa3.92□□□□□ -1.78
HDAC8-217ENST00000478743 PCP4P48539 62 aa3.92□□□□□ -1.78
HDAC8-217ENST00000478743 CAMK2N1Q7Z7J9 78 aa3.91□□□□□ -1.78
HDAC8-217ENST00000478743 KRTAP19-4Q3LI73 84 aa3.87□□□□□ -1.79
HDAC8-217ENST00000478743 GTF2H5Q6ZYL4 71 aa3.87□□□□□ -1.79
HDAC8-217ENST00000478743 C10orf95Q9H7T3 257 aa3.85□□□□□ -1.79
HDAC8-217ENST00000478743 PRO0461Q9UI25 63 aa3.84□□□□□ -1.79
HDAC8-217ENST00000478743 H3BT86 120 aa3.83□□□□□ -1.8
HDAC8-217ENST00000478743 KRTAP13-4Q3LI77 160 aa3.81□□□□□ -1.8
HDAC8-217ENST00000478743 F8W1H4 67 aa3.8□□□□□ -1.8
HDAC8-217ENST00000478743 ETDBQ3ZM63 59 aa3.8□□□□□ -1.8
HDAC8-217ENST00000478743 LCE3AQ5TA76 89 aa3.78□□□□□ -1.8
HDAC8-217ENST00000478743 A0A0A0MQY5 61 aa3.77□□□□□ -1.81
HDAC8-217ENST00000478743 H0Y9P7 68 aa3.77□□□□□ -1.81
HDAC8-217ENST00000478743 UBL5Q9BZL1 73 aa3.74□□□□□ -1.81
HDAC8-217ENST00000478743 KRTAP5-1Q6L8H4 278 aa3.73□□□□□ -1.81
HDAC8-217ENST00000478743 KRTAP6-1Q3LI64 71 aa3.67□□□□□ -1.82
HDAC8-217ENST00000478743 ATOX1O00244 68 aa3.66□□□□□ -1.82
HDAC8-217ENST00000478743 J3QR89 54 aa3.65□□□□□ -1.83
HDAC8-217ENST00000478743 KRTAP6-2Q3LI66 62 aa3.64□□□□□ -1.83
HDAC8-217ENST00000478743 K7ERU9 68 aa3.63□□□□□ -1.83
HDAC8-217ENST00000478743 UQCRQO14949 82 aa3.63□□□□□ -1.83
HDAC8-217ENST00000478743 DMAC1Q96GE9 116 aa3.63□□□□□ -1.83
HDAC8-217ENST00000478743 LINC00208Q96KT6 92 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms