RNA–Protein interactions for RNA: ENST00000475622.5

LPCAT1-202, Transcript of lysophosphatidylcholine acyltransferase 1, humanhuman

TSL 5

Gene LPCAT1, Length 5,610 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT1-202ENST00000475622 KRTAP8-1Q8IUC2 63 aa7.26□□□□□ -1.25
LPCAT1-202ENST00000475622 BSNQ9UPA5 3926 aa7.16□□□□□ -1.26
LPCAT1-202ENST00000475622 ALMS1Q8TCU4 4167 aa7.05□□□□□ -1.28
LPCAT1-202ENST00000475622 KRTAP4-1Q9BYQ7 146 aa7.03□□□□□ -1.28
LPCAT1-202ENST00000475622 DNAH5Q8TE73 4624 aa7.01□□□□□ -1.29
LPCAT1-202ENST00000475622 CSMD3Q7Z407 3707 aa6.98□□□□□ -1.29
LPCAT1-202ENST00000475622 MT1HP80294 61 aa6.95□□□□□ -1.3
LPCAT1-202ENST00000475622 PLECQ15149 4684 aaKnown RBP6.94□□□□□ -1.3
LPCAT1-202ENST00000475622 DNAH10Q8IVF4 4471 aa6.93□□□□□ -1.3
LPCAT1-202ENST00000475622 VPS13CQ709C8 3753 aa6.93□□□□□ -1.3
LPCAT1-202ENST00000475622 MT2AP02795 61 aa6.91□□□□□ -1.3
LPCAT1-202ENST00000475622 FAT1Q14517 4588 aa6.89□□□□□ -1.31
LPCAT1-202ENST00000475622 SPRR2GQ9BYE4 73 aa6.88□□□□□ -1.31
LPCAT1-202ENST00000475622 DNAH9Q9NYC9 4486 aa6.82□□□□□ -1.32
LPCAT1-202ENST00000475622 DNAH11Q96DT5 4516 aa6.82□□□□□ -1.32
LPCAT1-202ENST00000475622 KRTAP19-5Q3LI72 72 aa6.79□□□□□ -1.32
LPCAT1-202ENST00000475622 DNAH1Q9P2D7 4330 aa6.77□□□□□ -1.33
LPCAT1-202ENST00000475622 MT1FP04733 61 aa6.76□□□□□ -1.33
LPCAT1-202ENST00000475622 DNAH2Q9P225 4427 aa6.75□□□□□ -1.33
LPCAT1-202ENST00000475622 KRTAP10-7P60409 375 aaPredicted RBP6.73□□□□□ -1.33
LPCAT1-202ENST00000475622 SPRR2FQ96RM1 72 aa6.73□□□□□ -1.33
LPCAT1-202ENST00000475622 LCE3CQ5T5A8 94 aa6.72□□□□□ -1.33
LPCAT1-202ENST00000475622 DNAH8Q96JB1 4490 aa6.63□□□□□ -1.35
LPCAT1-202ENST00000475622 ZNF469Q96JG9 3925 aaPredicted RBP6.57□□□□□ -1.36
LPCAT1-202ENST00000475622 DNAH17Q9UFH2 4485 aa6.56□□□□□ -1.36
LPCAT1-202ENST00000475622 DYNC1H1Q14204 4646 aaKnown RBP6.56□□□□□ -1.36
LPCAT1-202ENST00000475622 RYR1P21817 5038 aa6.54□□□□□ -1.36
LPCAT1-202ENST00000475622 AKAP9Q99996 3911 aa6.53□□□□□ -1.36
LPCAT1-202ENST00000475622 SACSQ9NZJ4 4579 aa6.5□□□□□ -1.37
LPCAT1-202ENST00000475622 DNHD1Q96M86 4753 aa6.49□□□□□ -1.37
LPCAT1-202ENST00000475622 LRP1BQ9NZR2 4599 aa6.48□□□□□ -1.37
LPCAT1-202ENST00000475622 VPS13DQ5THJ4 4388 aa6.48□□□□□ -1.37
LPCAT1-202ENST00000475622 KRTAP19-4Q3LI73 84 aa6.47□□□□□ -1.37
LPCAT1-202ENST00000475622 APOBP04114 4563 aaKnown RBP6.35□□□□□ -1.39
LPCAT1-202ENST00000475622 KRTAP19-1Q8IUB9 90 aa6.34□□□□□ -1.39
LPCAT1-202ENST00000475622 KRTAP19-8Q3LI54 63 aa6.33□□□□□ -1.4
LPCAT1-202ENST00000475622 FAT2Q9NYQ8 4349 aa6.33□□□□□ -1.4
LPCAT1-202ENST00000475622 LCE3BQ5TA77 95 aa6.32□□□□□ -1.4
LPCAT1-202ENST00000475622 DYNC2H1Q8NCM8 4307 aaKnown RBP6.27□□□□□ -1.41
LPCAT1-202ENST00000475622 SPRR2EP22531 72 aa6.25□□□□□ -1.41
LPCAT1-202ENST00000475622 SPRR2BP35325 72 aa6.25□□□□□ -1.41
LPCAT1-202ENST00000475622 SPRR2AP35326 72 aa6.25□□□□□ -1.41
LPCAT1-202ENST00000475622 KRTAP12-4P60329 112 aa6.23□□□□□ -1.41
LPCAT1-202ENST00000475622 MT1XP80297 61 aa6.23□□□□□ -1.41
LPCAT1-202ENST00000475622 STARD9Q9P2P6 4700 aa6.23□□□□□ -1.41
LPCAT1-202ENST00000475622 FAT3Q8TDW7 4589 aa6.22□□□□□ -1.41
LPCAT1-202ENST00000475622 MT1GP13640 62 aa6.21□□□□□ -1.42
LPCAT1-202ENST00000475622 LRP1Q07954 4544 aaKnown RBP6.19□□□□□ -1.42
LPCAT1-202ENST00000475622 VPS13BQ7Z7G8 4022 aa6.17□□□□□ -1.42
LPCAT1-202ENST00000475622 DNAH3Q8TD57 4116 aa6.16□□□□□ -1.42
LPCAT1-202ENST00000475622 MYCBP2O75592 4640 aa6.15□□□□□ -1.42
LPCAT1-202ENST00000475622 ANK2Q01484 3957 aa6.13□□□□□ -1.43
LPCAT1-202ENST00000475622 MT1BP07438 61 aa6.12□□□□□ -1.43
LPCAT1-202ENST00000475622 RYR3Q15413 4870 aa6.12□□□□□ -1.43
LPCAT1-202ENST00000475622 KRTAP4-8A0A0G2JLE6 195 aa6.07□□□□□ -1.44
LPCAT1-202ENST00000475622 KRTAP4-8Q9BYQ9 185 aa6.07□□□□□ -1.44
LPCAT1-202ENST00000475622 SPRR2DP22532 72 aa6.04□□□□□ -1.44
LPCAT1-202ENST00000475622 KRTAP17-1Q9BYP8 105 aa6.04□□□□□ -1.44
LPCAT1-202ENST00000475622 LCE2BO14633 110 aa6.03□□□□□ -1.44
LPCAT1-202ENST00000475622 SPRR5A0A1B0GTR4 108 aa6.02□□□□□ -1.45
LPCAT1-202ENST00000475622 KRTAP9-8Q9BYQ0 159 aa6.01□□□□□ -1.45
LPCAT1-202ENST00000475622 LCE3DQ9BYE3 92 aa5.98□□□□□ -1.45
LPCAT1-202ENST00000475622 KIAA1109Q2LD37 5005 aa5.97□□□□□ -1.45
LPCAT1-202ENST00000475622 LYSTQ99698 3801 aa5.96□□□□□ -1.45
LPCAT1-202ENST00000475622 KMT2AQ03164 3969 aa5.93□□□□□ -1.46
LPCAT1-202ENST00000475622 PRKDCP78527 4128 aaKnown RBP5.93□□□□□ -1.46
LPCAT1-202ENST00000475622 LCE3EQ5T5B0 92 aa5.89□□□□□ -1.47
LPCAT1-202ENST00000475622 KRTAP9-3Q9BYQ3 159 aa5.88□□□□□ -1.47
LPCAT1-202ENST00000475622 RYR2Q92736 4967 aa5.83□□□□□ -1.48
LPCAT1-202ENST00000475622 LCE2CQ5TA81 110 aa5.82□□□□□ -1.48
LPCAT1-202ENST00000475622 FRAS1Q86XX4 4008 aa5.8□□□□□ -1.48
LPCAT1-202ENST00000475622 HERC1Q15751 4861 aa5.8□□□□□ -1.48
LPCAT1-202ENST00000475622 DNAH7Q8WXX0 4024 aa5.77□□□□□ -1.49
LPCAT1-202ENST00000475622 KRTAP4-7Q9BYR0 210 aa5.77□□□□□ -1.49
LPCAT1-202ENST00000475622 PKD1P98161 4303 aa5.77□□□□□ -1.49
LPCAT1-202ENST00000475622 KRTAP19-3Q7Z4W3 81 aa5.75□□□□□ -1.49
LPCAT1-202ENST00000475622 CMYA5Q8N3K9 4069 aa5.74□□□□□ -1.49
LPCAT1-202ENST00000475622 DNAH6Q9C0G6 4158 aa5.72□□□□□ -1.49
LPCAT1-202ENST00000475622 MT1LQ93083 61 aa5.71□□□□□ -1.5
LPCAT1-202ENST00000475622 LRP2P98164 4655 aa5.65□□□□□ -1.5
LPCAT1-202ENST00000475622 PCLOQ9Y6V0 5065 aa5.65□□□□□ -1.5
LPCAT1-202ENST00000475622 HSPG2P98160 4391 aa5.65□□□□□ -1.5
LPCAT1-202ENST00000475622 MT1EP04732 61 aa5.63□□□□□ -1.51
LPCAT1-202ENST00000475622 HERC2O95714 4834 aa5.63□□□□□ -1.51
LPCAT1-202ENST00000475622 HECTD4Q9Y4D8 3996 aa5.61□□□□□ -1.51
LPCAT1-202ENST00000475622 SYNE1Q8NF91 8797 aaKnown RBP5.58□□□□□ -1.52
LPCAT1-202ENST00000475622 LCE2DQ5TA82 110 aaPredicted RBP5.56□□□□□ -1.52
LPCAT1-202ENST00000475622 EPPK1P58107 5090 aaKnown RBP5.52□□□□□ -1.53
LPCAT1-202ENST00000475622 MT3P25713 68 aa5.48□□□□□ -1.53
LPCAT1-202ENST00000475622 MT1MQ8N339 61 aa5.48□□□□□ -1.53
LPCAT1-202ENST00000475622 PRM1P04553 51 aa5.47□□□□□ -1.53
LPCAT1-202ENST00000475622 KRTAP19-2Q3LHN2 52 aa5.46□□□□□ -1.54
LPCAT1-202ENST00000475622 KMT2CQ8NEZ4 4911 aaKnown RBP5.43□□□□□ -1.54
LPCAT1-202ENST00000475622 LOC100996750A0A140TA64 210 aa5.43□□□□□ -1.54
LPCAT1-202ENST00000475622 PKHD1L1Q86WI1 4243 aa5.42□□□□□ -1.54
LPCAT1-202ENST00000475622 BIRC6Q9NR09 4857 aa5.41□□□□□ -1.54
LPCAT1-202ENST00000475622 MT4P47944 62 aa5.4□□□□□ -1.55
LPCAT1-202ENST00000475622 LPAP08519 4548 aa5.39□□□□□ -1.55
LPCAT1-202ENST00000475622 KRTAP4-3Q9BYR4 195 aa5.36□□□□□ -1.55
LPCAT1-202ENST00000475622 HYDINQ4G0P3 5121 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms