RNA–Protein interactions for RNA: ENST00000475344.1

LTN1-204, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 3

Gene LTN1, Length 696 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-204ENST00000475344 S100A13Q99584 98 aa-1.35□□□□□ -2.63
LTN1-204ENST00000475344 KCNQ1DNQ9H478 68 aa-1.35□□□□□ -2.63
LTN1-204ENST00000475344 SMARCA2P51531 1590 aa-1.35□□□□□ -2.63
LTN1-204ENST00000475344 NRAPQ86VF7 1730 aa-1.35□□□□□ -2.63
LTN1-204ENST00000475344 DNAH14Q0VDD8 3507 aa-1.35□□□□□ -2.63
LTN1-204ENST00000475344 PCNTO95613 3336 aa-1.35□□□□□ -2.63
LTN1-204ENST00000475344 KIAA0586Q9BVV6 1533 aa-1.35□□□□□ -2.63
LTN1-204ENST00000475344 MMP24-AS1A0A0U1RRL7 71 aa-1.36□□□□□ -2.63
LTN1-204ENST00000475344 MAST1Q9Y2H9 1570 aa-1.37□□□□□ -2.63
LTN1-204ENST00000475344 WT1-ASQ06250 92 aa-1.37□□□□□ -2.63
LTN1-204ENST00000475344 BVES-AS1Q5T3Y7 98 aa-1.37□□□□□ -2.63
LTN1-204ENST00000475344 DCAF1Q9Y4B6 1507 aa-1.37□□□□□ -2.63
LTN1-204ENST00000475344 MED14O60244 1454 aa-1.37□□□□□ -2.63
LTN1-204ENST00000475344 KIF1AQ12756 1690 aa-1.38□□□□□ -2.63
LTN1-204ENST00000475344 HFM1A2PYH4 1435 aa-1.38□□□□□ -2.63
LTN1-204ENST00000475344 CFAP47Q6ZTR5 3102 aa-1.38□□□□□ -2.63
LTN1-204ENST00000475344 IGLV5-48A0A075B6I7 105 aa-1.38□□□□□ -2.63
LTN1-204ENST00000475344 UBL5Q9BZL1 73 aa-1.38□□□□□ -2.63
LTN1-204ENST00000475344 CD163L1Q9NR16 1453 aa-1.38□□□□□ -2.63
LTN1-204ENST00000475344 A0A1B0GUL6 1792 aa-1.39□□□□□ -2.63
LTN1-204ENST00000475344 ERVK-7P63135 1459 aa-1.39□□□□□ -2.63
LTN1-204ENST00000475344 RALGAPBQ86X10 1494 aa-1.39□□□□□ -2.63
LTN1-204ENST00000475344 DNAH12Q6ZR08 3092 aa-1.39□□□□□ -2.63
LTN1-204ENST00000475344 ABCC1P33527 1531 aa-1.4□□□□□ -2.63
LTN1-204ENST00000475344 EIF2AK4Q9P2K8 1649 aaKnown RBP-1.4□□□□□ -2.63
LTN1-204ENST00000475344 LINC01546A6NGU7 62 aa-1.4□□□□□ -2.63
LTN1-204ENST00000475344 DEFB136Q30KP8 78 aa-1.4□□□□□ -2.63
LTN1-204ENST00000475344 RPS27P42677 84 aaKnown RBP-1.41□□□□□ -2.64
LTN1-204ENST00000475344 KRTAP19-2Q3LHN2 52 aa-1.41□□□□□ -2.64
LTN1-204ENST00000475344 ENHOQ6UWT2 76 aa-1.41□□□□□ -2.64
LTN1-204ENST00000475344 RPS27LQ71UM5 84 aaKnown RBP-1.41□□□□□ -2.64
LTN1-204ENST00000475344 TIMM8BQ9Y5J9 83 aaPredicted RBP-1.41□□□□□ -2.64
LTN1-204ENST00000475344 LRRIQ1Q96JM4 1722 aa-1.41□□□□□ -2.64
LTN1-204ENST00000475344 NHSQ6T4R5 1651 aa-1.42□□□□□ -2.64
LTN1-204ENST00000475344 CFAP74Q9C0B2 1584 aa-1.42□□□□□ -2.64
LTN1-204ENST00000475344 INO80Q9ULG1 1556 aaPredicted RBP-1.42□□□□□ -2.64
LTN1-204ENST00000475344 RB1CC1Q8TDY2 1594 aa-1.43□□□□□ -2.64
LTN1-204ENST00000475344 CENPFP49454 3210 aa-1.44□□□□□ -2.64
LTN1-204ENST00000475344 MINOS1Q5TGZ0 78 aa-1.44□□□□□ -2.64
LTN1-204ENST00000475344 NCBP2-AS2Q69YL0 99 aa-1.44□□□□□ -2.64
LTN1-204ENST00000475344 C18orf32Q8TCD1 76 aa-1.44□□□□□ -2.64
LTN1-204ENST00000475344 CEP250Q9BV73 2442 aa-1.44□□□□□ -2.64
LTN1-204ENST00000475344 LMTK2Q8IWU2 1503 aa-1.45□□□□□ -2.64
LTN1-204ENST00000475344 ETDCA0A1B0GVM5 59 aa-1.45□□□□□ -2.64
LTN1-204ENST00000475344 A8MTW9 85 aa-1.46□□□□□ -2.64
LTN1-204ENST00000475344 CCDC18Q5T9S5 1454 aa-1.46□□□□□ -2.64
LTN1-204ENST00000475344 H3BVH4 76 aa-1.47□□□□□ -2.64
LTN1-204ENST00000475344 SFTA3P0C7M3 94 aa-1.48□□□□□ -2.65
LTN1-204ENST00000475344 DNMBPQ6XZF7 1577 aa-1.48□□□□□ -2.65
LTN1-204ENST00000475344 BRCA2P51587 3418 aa-1.49□□□□□ -2.65
LTN1-204ENST00000475344 ASPMQ8IZT6 3477 aa-1.49□□□□□ -2.65
LTN1-204ENST00000475344 KIF21BO75037 1637 aa-1.49□□□□□ -2.65
LTN1-204ENST00000475344 MYO5CQ9NQX4 1742 aa-1.49□□□□□ -2.65
LTN1-204ENST00000475344 CDH23Q9H251 3354 aa-1.5□□□□□ -2.65
LTN1-204ENST00000475344 M0QZ58 72 aa-1.5□□□□□ -2.65
LTN1-204ENST00000475344 SPART-AS1P0CW21 52 aa-1.5□□□□□ -2.65
LTN1-204ENST00000475344 DIP2AQ14689 1571 aa-1.51□□□□□ -2.65
LTN1-204ENST00000475344 M0QY20 66 aa-1.51□□□□□ -2.65
LTN1-204ENST00000475344 LEAP2Q969E1 77 aa-1.51□□□□□ -2.65
LTN1-204ENST00000475344 NOP10Q9NPE3 64 aaKnown RBP-1.51□□□□□ -2.65
LTN1-204ENST00000475344 ANKARQ7Z5J8 1434 aa-1.51□□□□□ -2.65
LTN1-204ENST00000475344 ABCA8O94911 1581 aa-1.51□□□□□ -2.65
LTN1-204ENST00000475344 C6orf48Q9UBA6 75 aa-1.52□□□□□ -2.65
LTN1-204ENST00000475344 CROCC2H7BZ55 1655 aa-1.52□□□□□ -2.65
LTN1-204ENST00000475344 FCER1GP30273 86 aa-1.53□□□□□ -2.65
LTN1-204ENST00000475344 TTTY10Q9BZA0 68 aa-1.53□□□□□ -2.65
LTN1-204ENST00000475344 VPS13AQ96RL7 3174 aa-1.53□□□□□ -2.66
LTN1-204ENST00000475344 FAM208AQ9UK61 1670 aaKnown RBP-1.55□□□□□ -2.66
LTN1-204ENST00000475344 H3BUA1 57 aa-1.55□□□□□ -2.66
LTN1-204ENST00000475344 C3P01024 1663 aa-1.56□□□□□ -2.66
LTN1-204ENST00000475344 ABCC6O95255 1503 aa-1.56□□□□□ -2.66
LTN1-204ENST00000475344 RRBP1Q9P2E9 1410 aaKnown RBP-1.57□□□□□ -2.66
LTN1-204ENST00000475344 EEA1Q15075 1411 aa-1.57□□□□□ -2.66
LTN1-204ENST00000475344 DEFB114Q30KQ6 69 aa-1.58□□□□□ -2.66
LTN1-204ENST00000475344 PREX2Q70Z35 1606 aa-1.58□□□□□ -2.66
LTN1-204ENST00000475344 UTRNP46939 3433 aa-1.59□□□□□ -2.66
LTN1-204ENST00000475344 ATXN8Q156A1 80 aa-1.6□□□□□ -2.67
LTN1-204ENST00000475344 HILPDAQ9Y5L2 63 aa-1.6□□□□□ -2.67
LTN1-204ENST00000475344 MROH1Q8NDA8 1641 aa-1.61□□□□□ -2.67
LTN1-204ENST00000475344 IQGAP3Q86VI3 1631 aa-1.62□□□□□ -2.67
LTN1-204ENST00000475344 KAAG1Q9UBP8 84 aa-1.63□□□□□ -2.67
LTN1-204ENST00000475344 CLASP1Q7Z460 1538 aa-1.63□□□□□ -2.67
LTN1-204ENST00000475344 NRXN3Q9Y4C0 1643 aa-1.64□□□□□ -2.67
LTN1-204ENST00000475344 ABCA9Q8IUA7 1624 aa-1.66□□□□□ -2.67
LTN1-204ENST00000475344 DEFB104AQ8WTQ1 72 aa-1.66□□□□□ -2.68
LTN1-204ENST00000475344 GOLGB1Q14789 3259 aaKnown RBP-1.66□□□□□ -2.68
LTN1-204ENST00000475344 XIRP2A4UGR9 3374 aa-1.67□□□□□ -2.68
LTN1-204ENST00000475344 GLI2P10070 1586 aa-1.68□□□□□ -2.68
LTN1-204ENST00000475344 GNG13Q9P2W3 67 aa-1.68□□□□□ -2.68
LTN1-204ENST00000475344 TIAM1Q13009 1591 aa-1.68□□□□□ -2.68
LTN1-204ENST00000475344 POLR2KP53803 58 aaKnown RBP-1.69□□□□□ -2.68
LTN1-204ENST00000475344 MADDQ8WXG6 1647 aa-1.69□□□□□ -2.68
LTN1-204ENST00000475344 UGGT2Q9NYU1 1516 aa-1.7□□□□□ -2.68
LTN1-204ENST00000475344 CCDC180Q9P1Z9 1646 aa-1.7□□□□□ -2.68
LTN1-204ENST00000475344 ABRACLQ9P1F3 81 aa-1.71□□□□□ -2.68
LTN1-204ENST00000475344 WFDC10BQ8IUB3 73 aa-1.72□□□□□ -2.68
LTN1-204ENST00000475344 ALS2Q96Q42 1657 aa-1.72□□□□□ -2.68
LTN1-204ENST00000475344 LMO7Q8WWI1 1683 aa-1.73□□□□□ -2.69
LTN1-204ENST00000475344 DUOX2Q9NRD8 1548 aa-1.74□□□□□ -2.69
LTN1-204ENST00000475344 LINC01549A6NIU2 74 aa-1.75□□□□□ -2.69
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms