RNA–Protein interactions for RNA: ENST00000471910.1

CDHR3-208, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 392 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-208ENST00000471910 CENPEQ02224 2701 aa1.39□□□□□ -2.19
CDHR3-208ENST00000471910 MTORP42345 2549 aa1.39□□□□□ -2.19
CDHR3-208ENST00000471910 TENM4Q6N022 2769 aa1.39□□□□□ -2.19
CDHR3-208ENST00000471910 A0A096LPF7 62 aa1.39□□□□□ -2.19
CDHR3-208ENST00000471910 NBDYA0A0U1RRE5 68 aa1.39□□□□□ -2.19
CDHR3-208ENST00000471910 CRYBG3Q68DQ2 2970 aa1.39□□□□□ -2.19
CDHR3-208ENST00000471910 MXRA5Q9NR99 2828 aa1.38□□□□□ -2.19
CDHR3-208ENST00000471910 H1FX-AS1Q4G0G2 97 aa1.38□□□□□ -2.19
CDHR3-208ENST00000471910 SSBP3-AS1Q7Z2R9 100 aa1.38□□□□□ -2.19
CDHR3-208ENST00000471910 DEFB124Q8NES8 71 aa1.38□□□□□ -2.19
CDHR3-208ENST00000471910 CRIPTQ9P021 101 aa1.38□□□□□ -2.19
CDHR3-208ENST00000471910 FLG2Q5D862 2391 aaPredicted RBP1.38□□□□□ -2.19
CDHR3-208ENST00000471910 USP9YO00507 2555 aaPredicted RBP1.38□□□□□ -2.19
CDHR3-208ENST00000471910 ASPMQ8IZT6 3477 aa1.37□□□□□ -2.19
CDHR3-208ENST00000471910 RPL37P61927 97 aaKnown RBP1.37□□□□□ -2.19
CDHR3-208ENST00000471910 DEFB136Q30KP8 78 aa1.37□□□□□ -2.19
CDHR3-208ENST00000471910 C10orf99Q6UWK7 81 aa1.37□□□□□ -2.19
CDHR3-208ENST00000471910 K7EIL1 84 aa1.36□□□□□ -2.19
CDHR3-208ENST00000471910 LAMA5O15230 3695 aa1.36□□□□□ -2.19
CDHR3-208ENST00000471910 MEGF8Q7Z7M0 2845 aa1.36□□□□□ -2.19
CDHR3-208ENST00000471910 DNHD1Q96M86 4753 aa1.36□□□□□ -2.19
CDHR3-208ENST00000471910 ACANP16112 2415 aa1.35□□□□□ -2.19
CDHR3-208ENST00000471910 TENM1Q9UKZ4 2725 aa1.34□□□□□ -2.19
CDHR3-208ENST00000471910 MUC2Q02817 5179 aa1.34□□□□□ -2.19
CDHR3-208ENST00000471910 PRLHP81277 87 aa1.34□□□□□ -2.19
CDHR3-208ENST00000471910 VPS13CQ709C8 3753 aa1.34□□□□□ -2.2
CDHR3-208ENST00000471910 PDZD2O15018 2839 aa1.34□□□□□ -2.2
CDHR3-208ENST00000471910 TRRAPQ9Y4A5 3859 aa1.33□□□□□ -2.2
CDHR3-208ENST00000471910 SRRM2Q9UQ35 2752 aaKnown RBP1.33□□□□□ -2.2
CDHR3-208ENST00000471910 PLAC4Q8WY50 150 aa1.33□□□□□ -2.2
CDHR3-208ENST00000471910 RYR1P21817 5038 aa1.33□□□□□ -2.2
CDHR3-208ENST00000471910 ZANQ9Y493 2812 aa1.32□□□□□ -2.2
CDHR3-208ENST00000471910 DNAH1Q9P2D7 4330 aa1.31□□□□□ -2.2
CDHR3-208ENST00000471910 FCGBPQ9Y6R7 5405 aaPredicted RBP1.31□□□□□ -2.2
CDHR3-208ENST00000471910 SVEP1Q4LDE5 3571 aa1.31□□□□□ -2.2
CDHR3-208ENST00000471910 A0A096LNI7 61 aa1.31□□□□□ -2.2
CDHR3-208ENST00000471910 DEFB135Q30KP9 77 aa1.31□□□□□ -2.2
CDHR3-208ENST00000471910 DEFB123Q8N688 67 aa1.31□□□□□ -2.2
CDHR3-208ENST00000471910 RYR3Q15413 4870 aa1.31□□□□□ -2.2
CDHR3-208ENST00000471910 INE1O15225 51 aa1.3□□□□□ -2.2
CDHR3-208ENST00000471910 RPS29P62273 56 aaKnown RBP1.3□□□□□ -2.2
CDHR3-208ENST00000471910 NIPBLQ6KC79 2804 aaeCLIP1.3□□□□□ -2.2
CDHR3-208ENST00000471910 FRAS1Q86XX4 4008 aa1.3□□□□□ -2.2
CDHR3-208ENST00000471910 ANK3Q12955 4377 aaKnown RBP1.29□□□□□ -2.2
CDHR3-208ENST00000471910 HIVEP1P15822 2718 aa1.29□□□□□ -2.2
CDHR3-208ENST00000471910 ITPR2Q14571 2701 aa1.29□□□□□ -2.2
CDHR3-208ENST00000471910 HTN3P15516 51 aa1.29□□□□□ -2.2
CDHR3-208ENST00000471910 CMYA5Q8N3K9 4069 aa1.29□□□□□ -2.2
CDHR3-208ENST00000471910 DNAH6Q9C0G6 4158 aa1.28□□□□□ -2.2
CDHR3-208ENST00000471910 NSD1Q96L73 2696 aaPredicted RBP1.28□□□□□ -2.2
CDHR3-208ENST00000471910 CSMD2Q7Z408 3487 aa1.28□□□□□ -2.2
CDHR3-208ENST00000471910 DNAH7Q8WXX0 4024 aa1.28□□□□□ -2.2
CDHR3-208ENST00000471910 VPS13DQ5THJ4 4388 aa1.28□□□□□ -2.2
CDHR3-208ENST00000471910 ANK2Q01484 3957 aa1.28□□□□□ -2.21
CDHR3-208ENST00000471910 GPR98Q8WXG9 6306 aa1.27□□□□□ -2.21
CDHR3-208ENST00000471910 BIRC6Q9NR09 4857 aa1.27□□□□□ -2.21
CDHR3-208ENST00000471910 DNAH3Q8TD57 4116 aa1.27□□□□□ -2.21
CDHR3-208ENST00000471910 LYSTQ99698 3801 aa1.27□□□□□ -2.21
CDHR3-208ENST00000471910 S4R3F8 94 aa1.27□□□□□ -2.21
CDHR3-208ENST00000471910 TGP01266 2768 aa1.27□□□□□ -2.21
CDHR3-208ENST00000471910 M0QZ58 72 aa1.26□□□□□ -2.21
CDHR3-208ENST00000471910 SPINK1P00995 79 aa1.26□□□□□ -2.21
CDHR3-208ENST00000471910 SPINK6Q6UWN8 80 aa1.26□□□□□ -2.21
CDHR3-208ENST00000471910 MGAM2Q2M2H8 2515 aa1.26□□□□□ -2.21
CDHR3-208ENST00000471910 DMBT1Q9UGM3 2413 aaPredicted RBP1.26□□□□□ -2.21
CDHR3-208ENST00000471910 PRKDCP78527 4128 aaKnown RBP1.25□□□□□ -2.21
CDHR3-208ENST00000471910 HYDINQ4G0P3 5121 aa1.25□□□□□ -2.21
CDHR3-208ENST00000471910 DEFB4AO15263 64 aa1.25□□□□□ -2.21
CDHR3-208ENST00000471910 UBE2DNLQ8IWF7 75 aa1.25□□□□□ -2.21
CDHR3-208ENST00000471910 HECTD4Q9Y4D8 3996 aa1.25□□□□□ -2.21
CDHR3-208ENST00000471910 COL7A1Q02388 2944 aa1.25□□□□□ -2.21
CDHR3-208ENST00000471910 DYNC2H1Q8NCM8 4307 aaKnown RBP1.24□□□□□ -2.21
CDHR3-208ENST00000471910 C10orf95Q9H7T3 257 aa1.23□□□□□ -2.21
CDHR3-208ENST00000471910 DNAH8Q96JB1 4490 aa1.22□□□□□ -2.21
CDHR3-208ENST00000471910 EPPK1P58107 5090 aaKnown RBP1.22□□□□□ -2.21
CDHR3-208ENST00000471910 KRTAP10-4P60372 401 aaPredicted RBP1.22□□□□□ -2.21
CDHR3-208ENST00000471910 DNAH2Q9P225 4427 aa1.21□□□□□ -2.22
CDHR3-208ENST00000471910 APLNQ9ULZ1 77 aa1.21□□□□□ -2.22
CDHR3-208ENST00000471910 TENM3Q9P273 2699 aa1.21□□□□□ -2.22
CDHR3-208ENST00000471910 CSMD3Q7Z407 3707 aa1.2□□□□□ -2.22
CDHR3-208ENST00000471910 STAB2Q8WWQ8 2551 aa1.2□□□□□ -2.22
CDHR3-208ENST00000471910 Q5VSD8 79 aa1.2□□□□□ -2.22
CDHR3-208ENST00000471910 DNAH17Q9UFH2 4485 aa1.2□□□□□ -2.22
CDHR3-208ENST00000471910 CUBNO60494 3623 aa1.2□□□□□ -2.22
CDHR3-208ENST00000471910 DNAH11Q96DT5 4516 aa1.19□□□□□ -2.22
CDHR3-208ENST00000471910 KMT2CQ8NEZ4 4911 aaKnown RBP1.19□□□□□ -2.22
CDHR3-208ENST00000471910 DNAH10Q8IVF4 4471 aa1.19□□□□□ -2.22
CDHR3-208ENST00000471910 HUWE1Q7Z6Z7 4374 aaKnown RBP1.18□□□□□ -2.22
CDHR3-208ENST00000471910 A0A0D9SG42 100 aa1.18□□□□□ -2.22
CDHR3-208ENST00000471910 DNAH9Q9NYC9 4486 aa1.18□□□□□ -2.22
CDHR3-208ENST00000471910 RYR2Q92736 4967 aa1.17□□□□□ -2.22
CDHR3-208ENST00000471910 ZNF469Q96JG9 3925 aaPredicted RBP1.17□□□□□ -2.22
CDHR3-208ENST00000471910 KMT2AQ03164 3969 aa1.15□□□□□ -2.22
CDHR3-208ENST00000471910 SMR3AQ99954 134 aa1.14□□□□□ -2.23
CDHR3-208ENST00000471910 PKD1P98161 4303 aa1.14□□□□□ -2.23
CDHR3-208ENST00000471910 FSIP2Q5CZC0 6907 aa1.14□□□□□ -2.23
CDHR3-208ENST00000471910 PKHD1L1Q86WI1 4243 aa1.13□□□□□ -2.23
CDHR3-208ENST00000471910 SACSQ9NZJ4 4579 aa1.13□□□□□ -2.23
CDHR3-208ENST00000471910 VPS13BQ7Z7G8 4022 aa1.13□□□□□ -2.23
CDHR3-208ENST00000471910 ABCA13Q86UQ4 5058 aa1.13□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms