RNA–Protein interactions for RNA: ENST00000470815.1

HERC3-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 4

Gene HERC3, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-208ENST00000470815 DNAH17Q9UFH2 4485 aa-0.42□□□□□ -2.48
HERC3-208ENST00000470815 CSMD1Q96PZ7 3565 aa-0.43□□□□□ -2.48
HERC3-208ENST00000470815 SMR3BP02814 79 aaPredicted RBP-0.43□□□□□ -2.48
HERC3-208ENST00000470815 TNP1P09430 55 aa-0.43□□□□□ -2.48
HERC3-208ENST00000470815 MT1HP80294 61 aa-0.43□□□□□ -2.48
HERC3-208ENST00000470815 CSMD2Q7Z408 3487 aa-0.43□□□□□ -2.48
HERC3-208ENST00000470815 C3P01024 1663 aa-0.43□□□□□ -2.48
HERC3-208ENST00000470815 CFAP46Q8IYW2 2715 aa-0.44□□□□□ -2.48
HERC3-208ENST00000470815 EYSQ5T1H1 3165 aa-0.44□□□□□ -2.48
HERC3-208ENST00000470815 A0A087WWC5 75 aa-0.44□□□□□ -2.48
HERC3-208ENST00000470815 IGIPA6NJ69 53 aa-0.44□□□□□ -2.48
HERC3-208ENST00000470815 DEFB1P60022 68 aa-0.44□□□□□ -2.48
HERC3-208ENST00000470815 LINC00308Q8TCZ7 52 aa-0.44□□□□□ -2.48
HERC3-208ENST00000470815 NOP10Q9NPE3 64 aaKnown RBP-0.44□□□□□ -2.48
HERC3-208ENST00000470815 DNAH8Q96JB1 4490 aa-0.44□□□□□ -2.48
HERC3-208ENST00000470815 CLASP1Q7Z460 1538 aa-0.44□□□□□ -2.48
HERC3-208ENST00000470815 RELNP78509 3460 aa-0.44□□□□□ -2.48
HERC3-208ENST00000470815 MYO9AB2RTY4 2548 aa-0.44□□□□□ -2.48
HERC3-208ENST00000470815 NMES1Q9C002 83 aa-0.45□□□□□ -2.48
HERC3-208ENST00000470815 KAAG1Q9UBP8 84 aa-0.45□□□□□ -2.48
HERC3-208ENST00000470815 DNAH11Q96DT5 4516 aa-0.45□□□□□ -2.48
HERC3-208ENST00000470815 LY75O60449 1722 aa-0.45□□□□□ -2.48
HERC3-208ENST00000470815 TLN1Q9Y490 2541 aaKnown RBP-0.45□□□□□ -2.48
HERC3-208ENST00000470815 EEA1Q15075 1411 aa-0.46□□□□□ -2.48
HERC3-208ENST00000470815 DMDP11532 3685 aa-0.46□□□□□ -2.48
HERC3-208ENST00000470815 TLN2Q9Y4G6 2542 aa-0.46□□□□□ -2.48
HERC3-208ENST00000470815 EFCAB5A4FU69 1503 aa-0.46□□□□□ -2.48
HERC3-208ENST00000470815 CLPSL2Q6UWE3 100 aa-0.46□□□□□ -2.48
HERC3-208ENST00000470815 KRTAP8-1Q8IUC2 63 aa-0.46□□□□□ -2.48
HERC3-208ENST00000470815 GLI2P10070 1586 aa-0.46□□□□□ -2.48
HERC3-208ENST00000470815 SPTBN5Q9NRC6 3674 aaKnown RBP-0.46□□□□□ -2.48
HERC3-208ENST00000470815 TIAM1Q13009 1591 aa-0.47□□□□□ -2.48
HERC3-208ENST00000470815 ABRACLQ9P1F3 81 aa-0.47□□□□□ -2.48
HERC3-208ENST00000470815 ABCA6Q8N139 1617 aa-0.47□□□□□ -2.48
HERC3-208ENST00000470815 MROH1Q8NDA8 1641 aa-0.47□□□□□ -2.48
HERC3-208ENST00000470815 CROCC2H7BZ55 1655 aa-0.47□□□□□ -2.48
HERC3-208ENST00000470815 BOD1L1Q8NFC6 3051 aa-0.47□□□□□ -2.49
HERC3-208ENST00000470815 DNAH10Q8IVF4 4471 aa-0.47□□□□□ -2.49
HERC3-208ENST00000470815 MAST1Q9Y2H9 1570 aa-0.48□□□□□ -2.49
HERC3-208ENST00000470815 SMIM27A0A1W2PRY6 76 aa-0.48□□□□□ -2.49
HERC3-208ENST00000470815 M0QY20 66 aa-0.48□□□□□ -2.49
HERC3-208ENST00000470815 SERF2P84101 59 aa-0.48□□□□□ -2.49
HERC3-208ENST00000470815 S100ZQ8WXG8 99 aa-0.48□□□□□ -2.49
HERC3-208ENST00000470815 TMEM167BQ9NRX6 74 aa-0.48□□□□□ -2.49
HERC3-208ENST00000470815 UNC80Q8N2C7 3258 aa-0.49□□□□□ -2.49
HERC3-208ENST00000470815 CDC42BPAQ5VT25 1732 aa-0.49□□□□□ -2.49
HERC3-208ENST00000470815 ADGRG4Q8IZF6 3080 aa-0.49□□□□□ -2.49
HERC3-208ENST00000470815 MT1HL1P0DM35 61 aa-0.49□□□□□ -2.49
HERC3-208ENST00000470815 WFDC10BQ8IUB3 73 aa-0.49□□□□□ -2.49
HERC3-208ENST00000470815 DCHS1Q96JQ0 3298 aa-0.49□□□□□ -2.49
HERC3-208ENST00000470815 SPEGQ15772 3267 aa-0.5□□□□□ -2.49
HERC3-208ENST00000470815 M0QZ58 72 aa-0.5□□□□□ -2.49
HERC3-208ENST00000470815 CENPEQ02224 2701 aa-0.5□□□□□ -2.49
HERC3-208ENST00000470815 LRBAP50851 2863 aa-0.5□□□□□ -2.49
HERC3-208ENST00000470815 MGAQ8IWI9 3026 aa-0.5□□□□□ -2.49
HERC3-208ENST00000470815 PRUNE2Q8WUY3 3088 aa-0.5□□□□□ -2.49
HERC3-208ENST00000470815 FREM2Q5SZK8 3169 aa-0.51□□□□□ -2.49
HERC3-208ENST00000470815 LOC400499M0QZD8 3231 aa-0.51□□□□□ -2.49
HERC3-208ENST00000470815 MT1BP07438 61 aa-0.51□□□□□ -2.49
HERC3-208ENST00000470815 CPS1P31327 1500 aa-0.51□□□□□ -2.49
HERC3-208ENST00000470815 C5orf42Q9H799 3197 aa-0.51□□□□□ -2.49
HERC3-208ENST00000470815 UGGT1Q9NYU2 1555 aa-0.51□□□□□ -2.49
HERC3-208ENST00000470815 FRYQ5TBA9 3013 aa-0.51□□□□□ -2.49
HERC3-208ENST00000470815 EFCAB6Q5THR3 1501 aa-0.52□□□□□ -2.49
HERC3-208ENST00000470815 A8MTW9 85 aa-0.52□□□□□ -2.49
HERC3-208ENST00000470815 H0YGX0 51 aa-0.52□□□□□ -2.49
HERC3-208ENST00000470815 MT1XP80297 61 aa-0.52□□□□□ -2.49
HERC3-208ENST00000470815 SZT2Q5T011 3432 aa-0.52□□□□□ -2.49
HERC3-208ENST00000470815 EP400Q96L91 3159 aa-0.52□□□□□ -2.49
HERC3-208ENST00000470815 ATMQ13315 3056 aa-0.52□□□□□ -2.49
HERC3-208ENST00000470815 VPS13CQ709C8 3753 aa-0.53□□□□□ -2.49
HERC3-208ENST00000470815 SMIM31A0A1B0GVY4 71 aa-0.53□□□□□ -2.49
HERC3-208ENST00000470815 TFF3Q07654 80 aa-0.53□□□□□ -2.49
HERC3-208ENST00000470815 SMIM5Q71RC9 77 aa-0.53□□□□□ -2.49
HERC3-208ENST00000470815 CCDC180Q9P1Z9 1646 aa-0.53□□□□□ -2.49
HERC3-208ENST00000470815 VCANP13611 3396 aa-0.54□□□□□ -2.5
HERC3-208ENST00000470815 MT1EP04732 61 aa-0.54□□□□□ -2.5
HERC3-208ENST00000470815 SPART-AS1P0CW21 52 aa-0.54□□□□□ -2.5
HERC3-208ENST00000470815 ALS2Q96Q42 1657 aa-0.54□□□□□ -2.5
HERC3-208ENST00000470815 DNAH14Q0VDD8 3507 aa-0.54□□□□□ -2.5
HERC3-208ENST00000470815 AGLP35573 1532 aa-0.54□□□□□ -2.5
HERC3-208ENST00000470815 CRYBG3Q68DQ2 2970 aa-0.55□□□□□ -2.5
HERC3-208ENST00000470815 A0A1B0GUL6 1792 aa-0.55□□□□□ -2.5
HERC3-208ENST00000470815 USP34Q70CQ2 3546 aa-0.55□□□□□ -2.5
HERC3-208ENST00000470815 ABCA10Q8WWZ4 1543 aa-0.56□□□□□ -2.5
HERC3-208ENST00000470815 SPTAN1Q13813 2472 aaKnown RBP-0.56□□□□□ -2.5
HERC3-208ENST00000470815 WDFY4Q6ZS81 3184 aa-0.57□□□□□ -2.5
HERC3-208ENST00000470815 MT1LQ93083 61 aa-0.57□□□□□ -2.5
HERC3-208ENST00000470815 PRXQ9BXM0 1461 aa-0.57□□□□□ -2.5
HERC3-208ENST00000470815 FAM208AQ9UK61 1670 aaKnown RBP-0.57□□□□□ -2.5
HERC3-208ENST00000470815 CEP350Q5VT06 3117 aa-0.58□□□□□ -2.5
HERC3-208ENST00000470815 LINC01546A6NGU7 62 aa-0.58□□□□□ -2.5
HERC3-208ENST00000470815 MT2AP02795 61 aa-0.58□□□□□ -2.5
HERC3-208ENST00000470815 MT1GP13640 62 aa-0.58□□□□□ -2.5
HERC3-208ENST00000470815 PLNP26678 52 aa-0.58□□□□□ -2.5
HERC3-208ENST00000470815 MT1MQ8N339 61 aa-0.58□□□□□ -2.5
HERC3-208ENST00000470815 KIF21BO75037 1637 aa-0.58□□□□□ -2.5
HERC3-208ENST00000470815 PCNTO95613 3336 aa-0.59□□□□□ -2.5
HERC3-208ENST00000470815 MUC3AQ02505 3323 aa-0.59□□□□□ -2.5
HERC3-208ENST00000470815 POLR2KP53803 58 aaKnown RBP-0.59□□□□□ -2.5
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms