RNA–Protein interactions for RNA: ENST00000466845.1

LRCH3-212, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 662 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-212ENST00000466845 DYNC2H1Q8NCM8 4307 aaKnown RBP2.83□□□□□ -1.96
LRCH3-212ENST00000466845 SPART-AS1P0CW21 52 aa2.83□□□□□ -1.96
LRCH3-212ENST00000466845 HTN3P15516 51 aa2.83□□□□□ -1.96
LRCH3-212ENST00000466845 PCOTHQ58A44 107 aa2.83□□□□□ -1.96
LRCH3-212ENST00000466845 IGKV2-24A0A0C4DH68 120 aa2.82□□□□□ -1.96
LRCH3-212ENST00000466845 H0YAA0 97 aa2.82□□□□□ -1.96
LRCH3-212ENST00000466845 DEFB1P60022 68 aa2.81□□□□□ -1.96
LRCH3-212ENST00000466845 SPINK13Q1W4C9 94 aa2.81□□□□□ -1.96
LRCH3-212ENST00000466845 C6orf48Q9UBA6 75 aa2.81□□□□□ -1.96
LRCH3-212ENST00000466845 APLNQ9ULZ1 77 aa2.81□□□□□ -1.96
LRCH3-212ENST00000466845 IGLV5-48A0A075B6I7 105 aa2.8□□□□□ -1.96
LRCH3-212ENST00000466845 DEFB130BP0DP73 79 aa2.8□□□□□ -1.96
LRCH3-212ENST00000466845 DEFB130AP0DP74 79 aa2.8□□□□□ -1.96
LRCH3-212ENST00000466845 HTN1P15515 57 aa2.8□□□□□ -1.96
LRCH3-212ENST00000466845 KRTAP13-2Q52LG2 175 aa2.8□□□□□ -1.96
LRCH3-212ENST00000466845 WFDC13Q8IUB5 93 aa2.8□□□□□ -1.96
LRCH3-212ENST00000466845 BIRC6Q9NR09 4857 aa2.79□□□□□ -1.96
LRCH3-212ENST00000466845 A8MTW9 85 aa2.78□□□□□ -1.96
LRCH3-212ENST00000466845 WFDC10BQ8IUB3 73 aa2.78□□□□□ -1.96
LRCH3-212ENST00000466845 MRPL34Q9BQ48 92 aaKnown RBP2.78□□□□□ -1.96
LRCH3-212ENST00000466845 DNAH1Q9P2D7 4330 aa2.77□□□□□ -1.97
LRCH3-212ENST00000466845 M0QY20 66 aa2.77□□□□□ -1.97
LRCH3-212ENST00000466845 COX6A2Q02221 97 aa2.77□□□□□ -1.97
LRCH3-212ENST00000466845 NOP10Q9NPE3 64 aaKnown RBP2.77□□□□□ -1.97
LRCH3-212ENST00000466845 EPPK1P58107 5090 aaKnown RBP2.77□□□□□ -1.97
LRCH3-212ENST00000466845 SACSQ9NZJ4 4579 aa2.76□□□□□ -1.97
LRCH3-212ENST00000466845 HYDINQ4G0P3 5121 aa2.76□□□□□ -1.97
LRCH3-212ENST00000466845 LCE1CQ5T751 118 aa2.76□□□□□ -1.97
LRCH3-212ENST00000466845 LCE1BQ5T7P3 118 aa2.76□□□□□ -1.97
LRCH3-212ENST00000466845 PP632Q6XCG6 107 aa2.76□□□□□ -1.97
LRCH3-212ENST00000466845 COX6B2Q6YFQ2 88 aa2.76□□□□□ -1.97
LRCH3-212ENST00000466845 PLECQ15149 4684 aaKnown RBP2.76□□□□□ -1.97
LRCH3-212ENST00000466845 RPL37P61927 97 aaKnown RBP2.75□□□□□ -1.97
LRCH3-212ENST00000466845 Q6ZSA8 131 aa2.75□□□□□ -1.97
LRCH3-212ENST00000466845 KMT2AQ03164 3969 aa2.74□□□□□ -1.97
LRCH3-212ENST00000466845 FLG2Q5D862 2391 aaPredicted RBP2.74□□□□□ -1.97
LRCH3-212ENST00000466845 HECTD4Q9Y4D8 3996 aa2.73□□□□□ -1.97
LRCH3-212ENST00000466845 H3BNG1 76 aa2.73□□□□□ -1.97
LRCH3-212ENST00000466845 PRR9Q5T870 116 aa2.73□□□□□ -1.97
LRCH3-212ENST00000466845 DNAH6Q9C0G6 4158 aa2.72□□□□□ -1.97
LRCH3-212ENST00000466845 C10orf95Q9H7T3 257 aa2.72□□□□□ -1.97
LRCH3-212ENST00000466845 FRAS1Q86XX4 4008 aa2.71□□□□□ -1.98
LRCH3-212ENST00000466845 A0A096LPF7 62 aa2.71□□□□□ -1.98
LRCH3-212ENST00000466845 PRO0255Q9UI72 69 aa2.71□□□□□ -1.98
LRCH3-212ENST00000466845 KRTAP10-1P60331 282 aa2.7□□□□□ -1.98
LRCH3-212ENST00000466845 LELP1Q5T871 98 aa2.7□□□□□ -1.98
LRCH3-212ENST00000466845 MMP24-AS1A0A0U1RRL7 71 aa2.68□□□□□ -1.98
LRCH3-212ENST00000466845 DNAH10Q8IVF4 4471 aa2.68□□□□□ -1.98
LRCH3-212ENST00000466845 VPS13DQ5THJ4 4388 aa2.67□□□□□ -1.98
LRCH3-212ENST00000466845 KRTAP5-8O75690 187 aa2.67□□□□□ -1.98
LRCH3-212ENST00000466845 H1FX-AS1Q4G0G2 97 aa2.67□□□□□ -1.98
LRCH3-212ENST00000466845 DEFB104AQ8WTQ1 72 aa2.67□□□□□ -1.98
LRCH3-212ENST00000466845 HERC2O95714 4834 aa2.67□□□□□ -1.98
LRCH3-212ENST00000466845 LINC01556Q5JQF7 62 aa2.65□□□□□ -1.99
LRCH3-212ENST00000466845 PKHD1P08F94 4074 aa2.65□□□□□ -1.99
LRCH3-212ENST00000466845 KIAA1109Q2LD37 5005 aa2.64□□□□□ -1.99
LRCH3-212ENST00000466845 DNAH17Q9UFH2 4485 aa2.64□□□□□ -1.99
LRCH3-212ENST00000466845 PCLOQ9Y6V0 5065 aa2.64□□□□□ -1.99
LRCH3-212ENST00000466845 FAT2Q9NYQ8 4349 aa2.62□□□□□ -1.99
LRCH3-212ENST00000466845 Q5VSD8 79 aa2.62□□□□□ -1.99
LRCH3-212ENST00000466845 UNQ6190/PRO20217Q6UXQ8 127 aa2.62□□□□□ -1.99
LRCH3-212ENST00000466845 TOMM7Q9P0U1 55 aa2.62□□□□□ -1.99
LRCH3-212ENST00000466845 DNAH2Q9P225 4427 aa2.62□□□□□ -1.99
LRCH3-212ENST00000466845 PKD1P98161 4303 aa2.61□□□□□ -1.99
LRCH3-212ENST00000466845 RYR1P21817 5038 aa2.61□□□□□ -1.99
LRCH3-212ENST00000466845 SMR3BP02814 79 aaPredicted RBP2.61□□□□□ -1.99
LRCH3-212ENST00000466845 DNAH11Q96DT5 4516 aa2.61□□□□□ -1.99
LRCH3-212ENST00000466845 ABCA13Q86UQ4 5058 aa2.6□□□□□ -1.99
LRCH3-212ENST00000466845 KRTAP13-4Q3LI77 160 aa2.59□□□□□ -1.99
LRCH3-212ENST00000466845 CLPSL2Q6UWE3 100 aa2.59□□□□□ -1.99
LRCH3-212ENST00000466845 DYNC1H1Q14204 4646 aaKnown RBP2.58□□□□□ -2
LRCH3-212ENST00000466845 DMBT1Q9UGM3 2413 aaPredicted RBP2.58□□□□□ -2
LRCH3-212ENST00000466845 SPRR5A0A1B0GTR4 108 aa2.58□□□□□ -2
LRCH3-212ENST00000466845 DNAH5Q8TE73 4624 aa2.56□□□□□ -2
LRCH3-212ENST00000466845 HSPG2P98160 4391 aa2.56□□□□□ -2
LRCH3-212ENST00000466845 LRP1BQ9NZR2 4599 aa2.56□□□□□ -2
LRCH3-212ENST00000466845 LCE3DQ9BYE3 92 aa2.55□□□□□ -2
LRCH3-212ENST00000466845 APOBP04114 4563 aaKnown RBP2.54□□□□□ -2
LRCH3-212ENST00000466845 VPS13BQ7Z7G8 4022 aa2.54□□□□□ -2
LRCH3-212ENST00000466845 SRRM2Q9UQ35 2752 aaKnown RBP2.54□□□□□ -2
LRCH3-212ENST00000466845 DEFB105AQ8NG35 78 aa2.52□□□□□ -2.01
LRCH3-212ENST00000466845 SPRR1AP35321 89 aa2.5□□□□□ -2.01
LRCH3-212ENST00000466845 MYCBP2O75592 4640 aa2.48□□□□□ -2.01
LRCH3-212ENST00000466845 A0A096LNI7 61 aa2.48□□□□□ -2.01
LRCH3-212ENST00000466845 KRTAP10-4P60372 401 aaPredicted RBP2.47□□□□□ -2.01
LRCH3-212ENST00000466845 UBR4Q5T4S7 5183 aa2.46□□□□□ -2.02
LRCH3-212ENST00000466845 HERC1Q15751 4861 aa2.46□□□□□ -2.02
LRCH3-212ENST00000466845 PRLHP81277 87 aa2.46□□□□□ -2.02
LRCH3-212ENST00000466845 SPINK6Q6UWN8 80 aa2.45□□□□□ -2.02
LRCH3-212ENST00000466845 FAT1Q14517 4588 aa2.45□□□□□ -2.02
LRCH3-212ENST00000466845 DNAH8Q96JB1 4490 aa2.44□□□□□ -2.02
LRCH3-212ENST00000466845 KRTAP10-10P60014 251 aa2.44□□□□□ -2.02
LRCH3-212ENST00000466845 SPRR1BP22528 89 aa2.43□□□□□ -2.02
LRCH3-212ENST00000466845 S4R3F8 94 aa2.43□□□□□ -2.02
LRCH3-212ENST00000466845 MT1HL1P0DM35 61 aa2.42□□□□□ -2.02
LRCH3-212ENST00000466845 PKHD1L1Q86WI1 4243 aa2.42□□□□□ -2.02
LRCH3-212ENST00000466845 LRP1Q07954 4544 aaKnown RBP2.39□□□□□ -2.03
LRCH3-212ENST00000466845 FAT3Q8TDW7 4589 aa2.38□□□□□ -2.03
LRCH3-212ENST00000466845 HMCN2Q8NDA2 5059 aa2.37□□□□□ -2.03
LRCH3-212ENST00000466845 SPINK1P00995 79 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms