RNA–Protein interactions for RNA: ENST00000464286.1

CLSTN1-204, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 563 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-204ENST00000464286 Q6ZSA8 131 aa3.96□□□□□ -1.78
CLSTN1-204ENST00000464286 STAB2Q8WWQ8 2551 aa3.96□□□□□ -1.78
CLSTN1-204ENST00000464286 H0YAA0 97 aa3.95□□□□□ -1.78
CLSTN1-204ENST00000464286 ROMO1P60602 79 aa3.95□□□□□ -1.78
CLSTN1-204ENST00000464286 LINC00304Q8N9R0 145 aa3.95□□□□□ -1.78
CLSTN1-204ENST00000464286 DYNC2H1Q8NCM8 4307 aaKnown RBP3.94□□□□□ -1.78
CLSTN1-204ENST00000464286 COX6B2Q6YFQ2 88 aa3.94□□□□□ -1.78
CLSTN1-204ENST00000464286 KRTAP1-4P0C5Y4 121 aa3.93□□□□□ -1.78
CLSTN1-204ENST00000464286 C20orf166-AS1Q96NR2 134 aa3.93□□□□□ -1.78
CLSTN1-204ENST00000464286 HERC2O95714 4834 aa3.92□□□□□ -1.78
CLSTN1-204ENST00000464286 KRTAP10-6P60371 365 aaPredicted RBP3.91□□□□□ -1.78
CLSTN1-204ENST00000464286 KRTAP10-7P60409 375 aaPredicted RBP3.91□□□□□ -1.78
CLSTN1-204ENST00000464286 CMYA5Q8N3K9 4069 aa3.9□□□□□ -1.79
CLSTN1-204ENST00000464286 DNAH10Q8IVF4 4471 aa3.88□□□□□ -1.79
CLSTN1-204ENST00000464286 DNAH9Q9NYC9 4486 aa3.87□□□□□ -1.79
CLSTN1-204ENST00000464286 RPL37P61927 97 aaKnown RBP3.87□□□□□ -1.79
CLSTN1-204ENST00000464286 KRTAP10-1P60331 282 aa3.86□□□□□ -1.79
CLSTN1-204ENST00000464286 DNAH17Q9UFH2 4485 aa3.84□□□□□ -1.79
CLSTN1-204ENST00000464286 DNAH8Q96JB1 4490 aa3.84□□□□□ -1.79
CLSTN1-204ENST00000464286 KRTAP5-11Q6L8G4 156 aa3.84□□□□□ -1.79
CLSTN1-204ENST00000464286 VPS13DQ5THJ4 4388 aa3.84□□□□□ -1.8
CLSTN1-204ENST00000464286 KIAA1109Q2LD37 5005 aa3.83□□□□□ -1.8
CLSTN1-204ENST00000464286 LYSTQ99698 3801 aa3.81□□□□□ -1.8
CLSTN1-204ENST00000464286 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.8□□□□□ -1.8
CLSTN1-204ENST00000464286 SPINT4Q6UDR6 99 aa3.8□□□□□ -1.8
CLSTN1-204ENST00000464286 CRIPTQ9P021 101 aa3.8□□□□□ -1.8
CLSTN1-204ENST00000464286 C9orf92A6NGG3 77 aa3.78□□□□□ -1.8
CLSTN1-204ENST00000464286 COL7A1Q02388 2944 aa3.78□□□□□ -1.8
CLSTN1-204ENST00000464286 PLECQ15149 4684 aaKnown RBP3.77□□□□□ -1.81
CLSTN1-204ENST00000464286 HECTD4Q9Y4D8 3996 aa3.77□□□□□ -1.81
CLSTN1-204ENST00000464286 S4R3F8 94 aa3.75□□□□□ -1.81
CLSTN1-204ENST00000464286 DNAH6Q9C0G6 4158 aa3.73□□□□□ -1.81
CLSTN1-204ENST00000464286 LCE1EQ5T753 118 aa3.73□□□□□ -1.81
CLSTN1-204ENST00000464286 ABCA13Q86UQ4 5058 aa3.71□□□□□ -1.82
CLSTN1-204ENST00000464286 M0QZ58 72 aa3.7□□□□□ -1.82
CLSTN1-204ENST00000464286 P0C880 135 aa3.7□□□□□ -1.82
CLSTN1-204ENST00000464286 DNAH2Q9P225 4427 aa3.7□□□□□ -1.82
CLSTN1-204ENST00000464286 DNAH7Q8WXX0 4024 aa3.69□□□□□ -1.82
CLSTN1-204ENST00000464286 MT3P25713 68 aa3.69□□□□□ -1.82
CLSTN1-204ENST00000464286 CSMD3Q7Z407 3707 aa3.69□□□□□ -1.82
CLSTN1-204ENST00000464286 A0A0D9SG42 100 aa3.68□□□□□ -1.82
CLSTN1-204ENST00000464286 HERC1Q15751 4861 aa3.68□□□□□ -1.82
CLSTN1-204ENST00000464286 SACSQ9NZJ4 4579 aa3.68□□□□□ -1.82
CLSTN1-204ENST00000464286 DNAH11Q96DT5 4516 aa3.67□□□□□ -1.82
CLSTN1-204ENST00000464286 STARD9Q9P2P6 4700 aa3.66□□□□□ -1.82
CLSTN1-204ENST00000464286 TPRXLQ17RH7 258 aa3.66□□□□□ -1.82
CLSTN1-204ENST00000464286 FRAS1Q86XX4 4008 aa3.64□□□□□ -1.83
CLSTN1-204ENST00000464286 DNAH5Q8TE73 4624 aa3.61□□□□□ -1.83
CLSTN1-204ENST00000464286 NDUFAF8A1L188 74 aa3.61□□□□□ -1.83
CLSTN1-204ENST00000464286 KRTAP13-4Q3LI77 160 aa3.61□□□□□ -1.83
CLSTN1-204ENST00000464286 SMR3BP02814 79 aaPredicted RBP3.6□□□□□ -1.83
CLSTN1-204ENST00000464286 FLG2Q5D862 2391 aaPredicted RBP3.59□□□□□ -1.83
CLSTN1-204ENST00000464286 KRTAP10-4P60372 401 aaPredicted RBP3.59□□□□□ -1.83
CLSTN1-204ENST00000464286 KRTAP12-1P59990 96 aa3.58□□□□□ -1.84
CLSTN1-204ENST00000464286 KRTAP12-2P59991 146 aa3.57□□□□□ -1.84
CLSTN1-204ENST00000464286 LRP1BQ9NZR2 4599 aa3.56□□□□□ -1.84
CLSTN1-204ENST00000464286 KRTAP10-8P60410 259 aa3.56□□□□□ -1.84
CLSTN1-204ENST00000464286 C10orf95Q9H7T3 257 aa3.56□□□□□ -1.84
CLSTN1-204ENST00000464286 A0A1B0GVY2 172 aa3.55□□□□□ -1.84
CLSTN1-204ENST00000464286 KMT2AQ03164 3969 aa3.55□□□□□ -1.84
CLSTN1-204ENST00000464286 MUC2Q02817 5179 aa3.54□□□□□ -1.84
CLSTN1-204ENST00000464286 PP632Q6XCG6 107 aa3.54□□□□□ -1.84
CLSTN1-204ENST00000464286 PKD1P98161 4303 aa3.53□□□□□ -1.84
CLSTN1-204ENST00000464286 DMBT1Q9UGM3 2413 aaPredicted RBP3.53□□□□□ -1.84
CLSTN1-204ENST00000464286 A0A0A0MQY5 61 aa3.52□□□□□ -1.85
CLSTN1-204ENST00000464286 VPS13BQ7Z7G8 4022 aa3.52□□□□□ -1.85
CLSTN1-204ENST00000464286 LUZP6Q538Z0 58 aa3.5□□□□□ -1.85
CLSTN1-204ENST00000464286 PKHD1L1Q86WI1 4243 aa3.5□□□□□ -1.85
CLSTN1-204ENST00000464286 R4GN34 69 aa3.49□□□□□ -1.85
CLSTN1-204ENST00000464286 PLAC4Q8WY50 150 aa3.48□□□□□ -1.85
CLSTN1-204ENST00000464286 FAT2Q9NYQ8 4349 aa3.46□□□□□ -1.86
CLSTN1-204ENST00000464286 KRTAP10-5P60370 271 aa3.46□□□□□ -1.86
CLSTN1-204ENST00000464286 Q5VSD8 79 aa3.45□□□□□ -1.86
CLSTN1-204ENST00000464286 APOBP04114 4563 aaKnown RBP3.44□□□□□ -1.86
CLSTN1-204ENST00000464286 PKHD1P08F94 4074 aa3.44□□□□□ -1.86
CLSTN1-204ENST00000464286 SEC61BP60468 96 aaKnown RBP3.4□□□□□ -1.87
CLSTN1-204ENST00000464286 LCE1FQ5T754 118 aa3.38□□□□□ -1.87
CLSTN1-204ENST00000464286 DYNC1H1Q14204 4646 aaKnown RBP3.37□□□□□ -1.87
CLSTN1-204ENST00000464286 KRTAP10-12P60413 245 aa3.37□□□□□ -1.87
CLSTN1-204ENST00000464286 RNF213Q63HN8 5207 aa3.36□□□□□ -1.87
CLSTN1-204ENST00000464286 CAMK2N1Q7Z7J9 78 aa3.36□□□□□ -1.87
CLSTN1-204ENST00000464286 FAT3Q8TDW7 4589 aa3.35□□□□□ -1.87
CLSTN1-204ENST00000464286 TNXBP22105 4242 aa3.34□□□□□ -1.87
CLSTN1-204ENST00000464286 FAT1Q14517 4588 aa3.33□□□□□ -1.88
CLSTN1-204ENST00000464286 LRP1Q07954 4544 aaKnown RBP3.33□□□□□ -1.88
CLSTN1-204ENST00000464286 FAT4Q6V0I7 4981 aa3.33□□□□□ -1.88
CLSTN1-204ENST00000464286 KRTAP9-6A8MVA2 160 aa3.32□□□□□ -1.88
CLSTN1-204ENST00000464286 MT1HL1P0DM35 61 aa3.31□□□□□ -1.88
CLSTN1-204ENST00000464286 KRTAP5-1Q6L8H4 278 aa3.3□□□□□ -1.88
CLSTN1-204ENST00000464286 FSIP2Q5CZC0 6907 aa3.29□□□□□ -1.88
CLSTN1-204ENST00000464286 TNP1P09430 55 aa3.29□□□□□ -1.88
CLSTN1-204ENST00000464286 CRCT1Q9UGL9 99 aa3.29□□□□□ -1.88
CLSTN1-204ENST00000464286 HSPG2P98160 4391 aa3.28□□□□□ -1.88
CLSTN1-204ENST00000464286 HMCN2Q8NDA2 5059 aa3.26□□□□□ -1.89
CLSTN1-204ENST00000464286 MYCBP2O75592 4640 aa3.2□□□□□ -1.9
CLSTN1-204ENST00000464286 SPRR5A0A1B0GTR4 108 aa3.19□□□□□ -1.9
CLSTN1-204ENST00000464286 LCE3CQ5T5A8 94 aa3.18□□□□□ -1.9
CLSTN1-204ENST00000464286 KRTAP5-4Q6L8H1 288 aa3.16□□□□□ -1.9
CLSTN1-204ENST00000464286 KRTAP4-4Q9BYR3 166 aa3.16□□□□□ -1.9
CLSTN1-204ENST00000464286 INE1O15225 51 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms