RNA–Protein interactions for RNA: ENST00000463407.5

NUP58-206, Transcript of nucleoporin 58, humanhuman

TSL 1 (best) BASIC

Gene NUP58, Length 6,360 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-206ENST00000463407 DNAH5Q8TE73 4624 aa5.49□□□□□ -1.53
NUP58-206ENST00000463407 LORP23490 312 aaPredicted RBP5.49□□□□□ -1.53
NUP58-206ENST00000463407 KRTAP12-3P60328 96 aa5.48□□□□□ -1.53
NUP58-206ENST00000463407 PLECQ15149 4684 aaKnown RBP5.46□□□□□ -1.53
NUP58-206ENST00000463407 CSMD3Q7Z407 3707 aa5.45□□□□□ -1.54
NUP58-206ENST00000463407 LCE3AQ5TA76 89 aa5.45□□□□□ -1.54
NUP58-206ENST00000463407 KRTAP8-1Q8IUC2 63 aa5.43□□□□□ -1.54
NUP58-206ENST00000463407 VPS13DQ5THJ4 4388 aa5.41□□□□□ -1.54
NUP58-206ENST00000463407 DNAH3Q8TD57 4116 aa5.41□□□□□ -1.54
NUP58-206ENST00000463407 KRTAP4-1Q9BYQ7 146 aa5.4□□□□□ -1.55
NUP58-206ENST00000463407 DNAH17Q9UFH2 4485 aa5.4□□□□□ -1.55
NUP58-206ENST00000463407 MT1HP80294 61 aa5.39□□□□□ -1.55
NUP58-206ENST00000463407 DNAH10Q8IVF4 4471 aa5.39□□□□□ -1.55
NUP58-206ENST00000463407 DNAH11Q96DT5 4516 aa5.38□□□□□ -1.55
NUP58-206ENST00000463407 DNAH2Q9P225 4427 aa5.37□□□□□ -1.55
NUP58-206ENST00000463407 KRTAP23-1A1A580 65 aa5.35□□□□□ -1.55
NUP58-206ENST00000463407 FAT2Q9NYQ8 4349 aa5.29□□□□□ -1.56
NUP58-206ENST00000463407 DYNC2H1Q8NCM8 4307 aaKnown RBP5.26□□□□□ -1.57
NUP58-206ENST00000463407 STARD9Q9P2P6 4700 aa5.26□□□□□ -1.57
NUP58-206ENST00000463407 DYNC1H1Q14204 4646 aaKnown RBP5.25□□□□□ -1.57
NUP58-206ENST00000463407 INE1O15225 51 aa5.25□□□□□ -1.57
NUP58-206ENST00000463407 LRP1BQ9NZR2 4599 aa5.25□□□□□ -1.57
NUP58-206ENST00000463407 MT2AP02795 61 aa5.24□□□□□ -1.57
NUP58-206ENST00000463407 DNHD1Q96M86 4753 aa5.23□□□□□ -1.57
NUP58-206ENST00000463407 ANK2Q01484 3957 aa5.23□□□□□ -1.57
NUP58-206ENST00000463407 SACSQ9NZJ4 4579 aa5.18□□□□□ -1.58
NUP58-206ENST00000463407 CMYA5Q8N3K9 4069 aa5.16□□□□□ -1.58
NUP58-206ENST00000463407 DNAH6Q9C0G6 4158 aa5.15□□□□□ -1.58
NUP58-206ENST00000463407 MT1FP04733 61 aa5.13□□□□□ -1.59
NUP58-206ENST00000463407 PRKDCP78527 4128 aaKnown RBP5.11□□□□□ -1.59
NUP58-206ENST00000463407 KMT2AQ03164 3969 aa5.11□□□□□ -1.59
NUP58-206ENST00000463407 KRTAP10-5P60370 271 aa5.11□□□□□ -1.59
NUP58-206ENST00000463407 SPRR2GQ9BYE4 73 aa5.11□□□□□ -1.59
NUP58-206ENST00000463407 DNAH8Q96JB1 4490 aa5.09□□□□□ -1.59
NUP58-206ENST00000463407 SPRR2FQ96RM1 72 aa5.08□□□□□ -1.6
NUP58-206ENST00000463407 FAT1Q14517 4588 aa5.07□□□□□ -1.6
NUP58-206ENST00000463407 DNAH7Q8WXX0 4024 aa5.06□□□□□ -1.6
NUP58-206ENST00000463407 RYR1P21817 5038 aa5.03□□□□□ -1.6
NUP58-206ENST00000463407 VPS13BQ7Z7G8 4022 aa5.03□□□□□ -1.6
NUP58-206ENST00000463407 KRTAP10-7P60409 375 aaPredicted RBP4.97□□□□□ -1.61
NUP58-206ENST00000463407 KRTAP17-1Q9BYP8 105 aa4.97□□□□□ -1.61
NUP58-206ENST00000463407 KRTAP19-5Q3LI72 72 aa4.95□□□□□ -1.62
NUP58-206ENST00000463407 FRAS1Q86XX4 4008 aa4.94□□□□□ -1.62
NUP58-206ENST00000463407 APOBP04114 4563 aaKnown RBP4.94□□□□□ -1.62
NUP58-206ENST00000463407 RYR3Q15413 4870 aa4.88□□□□□ -1.63
NUP58-206ENST00000463407 LYSTQ99698 3801 aa4.86□□□□□ -1.63
NUP58-206ENST00000463407 HECTD4Q9Y4D8 3996 aa4.85□□□□□ -1.63
NUP58-206ENST00000463407 FAT3Q8TDW7 4589 aa4.85□□□□□ -1.63
NUP58-206ENST00000463407 SPRR2EP22531 72 aa4.85□□□□□ -1.63
NUP58-206ENST00000463407 SPRR2BP35325 72 aa4.85□□□□□ -1.63
NUP58-206ENST00000463407 SPRR2AP35326 72 aa4.85□□□□□ -1.63
NUP58-206ENST00000463407 LCE3CQ5T5A8 94 aa4.8□□□□□ -1.64
NUP58-206ENST00000463407 KRTAP19-8Q3LI54 63 aa4.75□□□□□ -1.65
NUP58-206ENST00000463407 KRTAP19-1Q8IUB9 90 aa4.72□□□□□ -1.65
NUP58-206ENST00000463407 RYR2Q92736 4967 aa4.71□□□□□ -1.66
NUP58-206ENST00000463407 HSPG2P98160 4391 aa4.71□□□□□ -1.66
NUP58-206ENST00000463407 SPRR2DP22532 72 aa4.69□□□□□ -1.66
NUP58-206ENST00000463407 KRTAP9-8Q9BYQ0 159 aa4.66□□□□□ -1.66
NUP58-206ENST00000463407 PKHD1L1Q86WI1 4243 aa4.66□□□□□ -1.66
NUP58-206ENST00000463407 LRP1Q07954 4544 aaKnown RBP4.65□□□□□ -1.67
NUP58-206ENST00000463407 MT1XP80297 61 aa4.64□□□□□ -1.67
NUP58-206ENST00000463407 KRTAP19-4Q3LI73 84 aa4.64□□□□□ -1.67
NUP58-206ENST00000463407 HERC1Q15751 4861 aa4.62□□□□□ -1.67
NUP58-206ENST00000463407 LCE2BO14633 110 aa4.62□□□□□ -1.67
NUP58-206ENST00000463407 MT1BP07438 61 aa4.62□□□□□ -1.67
NUP58-206ENST00000463407 HYDINQ4G0P3 5121 aa4.61□□□□□ -1.67
NUP58-206ENST00000463407 BIRC6Q9NR09 4857 aa4.58□□□□□ -1.68
NUP58-206ENST00000463407 MYCBP2O75592 4640 aa4.58□□□□□ -1.68
NUP58-206ENST00000463407 KIAA1109Q2LD37 5005 aa4.58□□□□□ -1.68
NUP58-206ENST00000463407 LCE2CQ5TA81 110 aa4.58□□□□□ -1.68
NUP58-206ENST00000463407 KRTAP9-3Q9BYQ3 159 aa4.57□□□□□ -1.68
NUP58-206ENST00000463407 MT1GP13640 62 aa4.53□□□□□ -1.68
NUP58-206ENST00000463407 KRTAP4-8A0A0G2JLE6 195 aa4.52□□□□□ -1.69
NUP58-206ENST00000463407 KRTAP4-8Q9BYQ9 185 aa4.52□□□□□ -1.69
NUP58-206ENST00000463407 PKD1P98161 4303 aa4.52□□□□□ -1.69
NUP58-206ENST00000463407 LCE3BQ5TA77 95 aa4.51□□□□□ -1.69
NUP58-206ENST00000463407 LPAP08519 4548 aa4.5□□□□□ -1.69
NUP58-206ENST00000463407 HERC2O95714 4834 aa4.48□□□□□ -1.69
NUP58-206ENST00000463407 PKHD1P08F94 4074 aa4.48□□□□□ -1.69
NUP58-206ENST00000463407 TNXBP22105 4242 aa4.47□□□□□ -1.69
NUP58-206ENST00000463407 KRTAP12-4P60329 112 aa4.46□□□□□ -1.7
NUP58-206ENST00000463407 MUC17Q685J3 4493 aa4.37□□□□□ -1.71
NUP58-206ENST00000463407 KRTAP9-2Q9BYQ4 174 aa4.35□□□□□ -1.71
NUP58-206ENST00000463407 LRP2P98164 4655 aa4.34□□□□□ -1.72
NUP58-206ENST00000463407 KRTAP19-2Q3LHN2 52 aa4.33□□□□□ -1.72
NUP58-206ENST00000463407 PCLOQ9Y6V0 5065 aa4.33□□□□□ -1.72
NUP58-206ENST00000463407 KRTAP19-3Q7Z4W3 81 aa4.3□□□□□ -1.72
NUP58-206ENST00000463407 LCE2DQ5TA82 110 aaPredicted RBP4.26□□□□□ -1.73
NUP58-206ENST00000463407 KMT2CQ8NEZ4 4911 aaKnown RBP4.22□□□□□ -1.73
NUP58-206ENST00000463407 KRTAP19-6Q3LI70 58 aa4.2□□□□□ -1.74
NUP58-206ENST00000463407 MT1LQ93083 61 aa4.2□□□□□ -1.74
NUP58-206ENST00000463407 FLGP20930 4061 aaPredicted RBP4.2□□□□□ -1.74
NUP58-206ENST00000463407 MT1EP04732 61 aa4.19□□□□□ -1.74
NUP58-206ENST00000463407 KRTAP4-7Q9BYR0 210 aa4.19□□□□□ -1.74
NUP58-206ENST00000463407 SPRR5A0A1B0GTR4 108 aa4.18□□□□□ -1.74
NUP58-206ENST00000463407 LCE3DQ9BYE3 92 aa4.17□□□□□ -1.74
NUP58-206ENST00000463407 MT4P47944 62 aa4.16□□□□□ -1.74
NUP58-206ENST00000463407 KRTAP9-6A0A140TA67 174 aa4.16□□□□□ -1.74
NUP58-206ENST00000463407 MT1MQ8N339 61 aa4.08□□□□□ -1.76
NUP58-206ENST00000463407 LCE2AQ5TA79 106 aaPredicted RBP4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms