RNA–Protein interactions for RNA: ENST00000460558.5

ECHDC1-211, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 301 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-211ENST00000460558 C2orf91Q6ZV80 131 aa1.46□□□□□ -2.18
ECHDC1-211ENST00000460558 LINC00472Q9H8W2 130 aa1.46□□□□□ -2.18
ECHDC1-211ENST00000460558 PLNP26678 52 aa1.45□□□□□ -2.18
ECHDC1-211ENST00000460558 C7orf65Q6ZTY9 151 aa1.45□□□□□ -2.18
ECHDC1-211ENST00000460558 SMIM11BQ8TCY0 68 aa1.45□□□□□ -2.18
ECHDC1-211ENST00000460558 PEA15Q15121 130 aa1.44□□□□□ -2.18
ECHDC1-211ENST00000460558 KRTAP19-7Q3SYF9 63 aa1.44□□□□□ -2.18
ECHDC1-211ENST00000460558 COPS9Q8WXC6 57 aa1.44□□□□□ -2.18
ECHDC1-211ENST00000460558 C12orf57Q99622 126 aa1.44□□□□□ -2.18
ECHDC1-211ENST00000460558 SEC11CQ9BY50 192 aa1.44□□□□□ -2.18
ECHDC1-211ENST00000460558 KRTAP12-4P60329 112 aa1.43□□□□□ -2.18
ECHDC1-211ENST00000460558 FABP9Q0Z7S8 132 aa1.43□□□□□ -2.18
ECHDC1-211ENST00000460558 C18orf32Q8TCD1 76 aa1.43□□□□□ -2.18
ECHDC1-211ENST00000460558 TRBV7-4A0A0J9YYF1 115 aa1.42□□□□□ -2.18
ECHDC1-211ENST00000460558 H3BMG7 143 aa1.42□□□□□ -2.18
ECHDC1-211ENST00000460558 TRGC2P03986 189 aa1.42□□□□□ -2.18
ECHDC1-211ENST00000460558 MT1MQ8N339 61 aa1.42□□□□□ -2.18
ECHDC1-211ENST00000460558 NDUFB1O75438 58 aa1.41□□□□□ -2.18
ECHDC1-211ENST00000460558 DPM2O94777 84 aa1.41□□□□□ -2.18
ECHDC1-211ENST00000460558 TTTY13Q9BZ97 58 aa1.41□□□□□ -2.18
ECHDC1-211ENST00000460558 HSPB8Q9UJY1 196 aa1.41□□□□□ -2.18
ECHDC1-211ENST00000460558 J3KT08 172 aa1.4□□□□□ -2.19
ECHDC1-211ENST00000460558 IGKCP01834 107 aa1.4□□□□□ -2.19
ECHDC1-211ENST00000460558 LCE1CQ5T751 118 aa1.4□□□□□ -2.19
ECHDC1-211ENST00000460558 LCE1BQ5T7P3 118 aa1.4□□□□□ -2.19
ECHDC1-211ENST00000460558 TRACP01848 142 aa1.39□□□□□ -2.19
ECHDC1-211ENST00000460558 IFITM1P13164 125 aa1.39□□□□□ -2.19
ECHDC1-211ENST00000460558 S100PP25815 95 aa1.39□□□□□ -2.19
ECHDC1-211ENST00000460558 SNCGO76070 127 aa1.38□□□□□ -2.19
ECHDC1-211ENST00000460558 BVES-AS1Q5T3Y7 98 aa1.38□□□□□ -2.19
ECHDC1-211ENST00000460558 ANKRD29Q8N6D5 301 aa1.38□□□□□ -2.19
ECHDC1-211ENST00000460558 CHCHD1Q96BP2 118 aaKnown RBP1.38□□□□□ -2.19
ECHDC1-211ENST00000460558 PMCHL2Q9BQD1 86 aa1.38□□□□□ -2.19
ECHDC1-211ENST00000460558 hDV103S1A0JD37 113 aa1.37□□□□□ -2.19
ECHDC1-211ENST00000460558 CCKP06307 115 aa1.37□□□□□ -2.19
ECHDC1-211ENST00000460558 SYNE1Q8NF91 8797 aaKnown RBP1.36□□□□□ -2.19
ECHDC1-211ENST00000460558 LEPROTL1O95214 131 aa1.36□□□□□ -2.19
ECHDC1-211ENST00000460558 FABP2P12104 132 aa1.36□□□□□ -2.19
ECHDC1-211ENST00000460558 MUSTN1Q8IVN3 82 aa1.36□□□□□ -2.19
ECHDC1-211ENST00000460558 MRPL34Q9BQ48 92 aaKnown RBP1.36□□□□□ -2.19
ECHDC1-211ENST00000460558 TRAV7A0A075B6U4 112 aa1.35□□□□□ -2.19
ECHDC1-211ENST00000460558 TMEM254Q8TBM7 123 aa1.35□□□□□ -2.19
ECHDC1-211ENST00000460558 HIST1H4AP62805 103 aaKnown RBP1.34□□□□□ -2.19
ECHDC1-211ENST00000460558 LINC01554Q52M75 96 aa1.34□□□□□ -2.19
ECHDC1-211ENST00000460558 A0A1B0GV72 72 aa1.33□□□□□ -2.2
ECHDC1-211ENST00000460558 H3BT86 120 aa1.33□□□□□ -2.2
ECHDC1-211ENST00000460558 M0QZ58 72 aa1.33□□□□□ -2.2
ECHDC1-211ENST00000460558 KRTAP13-4Q3LI77 160 aa1.33□□□□□ -2.2
ECHDC1-211ENST00000460558 MT1LQ93083 61 aa1.33□□□□□ -2.2
ECHDC1-211ENST00000460558 VPS25Q9BRG1 176 aa1.33□□□□□ -2.2
ECHDC1-211ENST00000460558 HIST1H2BOP23527 126 aa1.32□□□□□ -2.2
ECHDC1-211ENST00000460558 HIST1H2BBP33778 126 aa1.32□□□□□ -2.2
ECHDC1-211ENST00000460558 HIST1H2BDP58876 126 aa1.32□□□□□ -2.2
ECHDC1-211ENST00000460558 KRTAP12-3P60328 96 aa1.32□□□□□ -2.2
ECHDC1-211ENST00000460558 HIST1H2BCP62807 126 aa1.32□□□□□ -2.2
ECHDC1-211ENST00000460558 HIST2H2BEQ16778 126 aa1.32□□□□□ -2.2
ECHDC1-211ENST00000460558 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.32□□□□□ -2.2
ECHDC1-211ENST00000460558 HIST1H2BHQ93079 126 aa1.32□□□□□ -2.2
ECHDC1-211ENST00000460558 HIST1H2BNQ99877 126 aa1.32□□□□□ -2.2
ECHDC1-211ENST00000460558 HIST1H2BMQ99879 126 aa1.32□□□□□ -2.2
ECHDC1-211ENST00000460558 MMP24-AS1A0A0U1RRL7 71 aa1.31□□□□□ -2.2
ECHDC1-211ENST00000460558 HCG22E2RYF7 251 aa1.31□□□□□ -2.2
ECHDC1-211ENST00000460558 FABP4P15090 132 aa1.31□□□□□ -2.2
ECHDC1-211ENST00000460558 FXYD2P54710 66 aa1.31□□□□□ -2.2
ECHDC1-211ENST00000460558 KRTAP19-5Q3LI72 72 aa1.31□□□□□ -2.2
ECHDC1-211ENST00000460558 H0YGX0 51 aa1.3□□□□□ -2.2
ECHDC1-211ENST00000460558 NDUFC1O43677 76 aa1.3□□□□□ -2.2
ECHDC1-211ENST00000460558 KRTAP12-1P59990 96 aa1.3□□□□□ -2.2
ECHDC1-211ENST00000460558 Q6ZQT0 140 aa1.3□□□□□ -2.2
ECHDC1-211ENST00000460558 C20orf197Q8N268 126 aa1.3□□□□□ -2.2
ECHDC1-211ENST00000460558 KTN1-AS1Q86SY8 53 aa1.29□□□□□ -2.2
ECHDC1-211ENST00000460558 A0A087WVE0 104 aa1.28□□□□□ -2.2
ECHDC1-211ENST00000460558 A0A1B0GX51 115 aa1.28□□□□□ -2.2
ECHDC1-211ENST00000460558 TMEM258P61165 79 aa1.28□□□□□ -2.2
ECHDC1-211ENST00000460558 SYS1-DBNDD2H3BUS1 97 aa1.26□□□□□ -2.21
ECHDC1-211ENST00000460558 TMEM256-PLSCR3K7ERE1 68 aa1.26□□□□□ -2.21
ECHDC1-211ENST00000460558 DNAL4O96015 105 aa1.26□□□□□ -2.21
ECHDC1-211ENST00000460558 ORMDL1Q9P0S3 153 aa1.26□□□□□ -2.21
ECHDC1-211ENST00000460558 A0A1W2PPM0 123 aa1.25□□□□□ -2.21
ECHDC1-211ENST00000460558 LINC01545Q5VT33 79 aa1.25□□□□□ -2.21
ECHDC1-211ENST00000460558 NAA38Q9BRA0 125 aaKnown RBP1.25□□□□□ -2.21
ECHDC1-211ENST00000460558 MT-ATP8P03928 68 aa1.24□□□□□ -2.21
ECHDC1-211ENST00000460558 NDUFA5Q16718 116 aa1.24□□□□□ -2.21
ECHDC1-211ENST00000460558 Q1T7F1 81 aa1.24□□□□□ -2.21
ECHDC1-211ENST00000460558 A0A0D9SG42 100 aa1.23□□□□□ -2.21
ECHDC1-211ENST00000460558 C9JAW5 83 aa1.23□□□□□ -2.21
ECHDC1-211ENST00000460558 HIST3H2BBQ8N257 126 aa1.23□□□□□ -2.21
ECHDC1-211ENST00000460558 TMEM218A2RU14 115 aa1.22□□□□□ -2.21
ECHDC1-211ENST00000460558 COA5Q86WW8 74 aa1.22□□□□□ -2.21
ECHDC1-211ENST00000460558 CASC2Q6XLA1 102 aa1.21□□□□□ -2.22
ECHDC1-211ENST00000460558 NREPQ16612 68 aa1.2□□□□□ -2.22
ECHDC1-211ENST00000460558 C10orf95Q9H7T3 257 aa1.19□□□□□ -2.22
ECHDC1-211ENST00000460558 KRTDAPP60985 99 aa1.18□□□□□ -2.22
ECHDC1-211ENST00000460558 ACYP1P07311 99 aa1.17□□□□□ -2.22
ECHDC1-211ENST00000460558 KRTAP6-2Q3LI66 62 aa1.17□□□□□ -2.22
ECHDC1-211ENST00000460558 ATOH7Q8N100 152 aa1.17□□□□□ -2.22
ECHDC1-211ENST00000460558 MUC19Q7Z5P9 8384 aa1.17□□□□□ -2.22
ECHDC1-211ENST00000460558 K7EP34 96 aa1.16□□□□□ -2.22
ECHDC1-211ENST00000460558 BAALC-AS2P0C853 105 aa1.16□□□□□ -2.22
ECHDC1-211ENST00000460558 HIST1H2BLQ99880 126 aa1.16□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms