RNA–Protein interactions for RNA: ENST00000458304.2

SPARCL1-204, Transcript of SPARC like 1, humanhuman

TSL 4

Gene SPARCL1, Length 568 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARCL1-204ENST00000458304 DNAH6Q9C0G6 4158 aa2.6□□□□□ -1.99
SPARCL1-204ENST00000458304 TRAV22A0A0B4J277 110 aa2.6□□□□□ -1.99
SPARCL1-204ENST00000458304 A0A087WVE0 104 aa2.59□□□□□ -1.99
SPARCL1-204ENST00000458304 CHKB-CPT1BH3BT56 60 aa2.59□□□□□ -1.99
SPARCL1-204ENST00000458304 KRTAP13-2Q52LG2 175 aa2.59□□□□□ -1.99
SPARCL1-204ENST00000458304 LCE3CQ5T5A8 94 aa2.59□□□□□ -1.99
SPARCL1-204ENST00000458304 Q5VSD8 79 aa2.59□□□□□ -1.99
SPARCL1-204ENST00000458304 K7EQZ3 153 aa2.58□□□□□ -2
SPARCL1-204ENST00000458304 KLKP1Q107X0 134 aa2.58□□□□□ -2
SPARCL1-204ENST00000458304 Q5VV11 94 aa2.58□□□□□ -2
SPARCL1-204ENST00000458304 LINC00472Q9H8W2 130 aa2.58□□□□□ -2
SPARCL1-204ENST00000458304 FRAS1Q86XX4 4008 aa2.57□□□□□ -2
SPARCL1-204ENST00000458304 WFDC13Q8IUB5 93 aa2.57□□□□□ -2
SPARCL1-204ENST00000458304 VPS13DQ5THJ4 4388 aa2.56□□□□□ -2
SPARCL1-204ENST00000458304 MRPL34Q9BQ48 92 aaKnown RBP2.56□□□□□ -2
SPARCL1-204ENST00000458304 DNAH1Q9P2D7 4330 aa2.56□□□□□ -2
SPARCL1-204ENST00000458304 DNAH10Q8IVF4 4471 aa2.55□□□□□ -2
SPARCL1-204ENST00000458304 C20orf197Q8N268 126 aa2.55□□□□□ -2
SPARCL1-204ENST00000458304 H0Y9P7 68 aa2.54□□□□□ -2
SPARCL1-204ENST00000458304 MMP24-AS1A0A0U1RRL7 71 aa2.53□□□□□ -2
SPARCL1-204ENST00000458304 LOC101927531A0A1B0GV80 90 aa2.53□□□□□ -2
SPARCL1-204ENST00000458304 A8MU10 97 aa2.53□□□□□ -2
SPARCL1-204ENST00000458304 Q96NJ1 140 aa2.52□□□□□ -2.01
SPARCL1-204ENST00000458304 KRTAP4-4Q9BYR3 166 aa2.52□□□□□ -2.01
SPARCL1-204ENST00000458304 KRTAP5-4Q6L8H1 288 aa2.51□□□□□ -2.01
SPARCL1-204ENST00000458304 LINC00208Q96KT6 92 aa2.51□□□□□ -2.01
SPARCL1-204ENST00000458304 SNURFQ9Y675 71 aa2.49□□□□□ -2.01
SPARCL1-204ENST00000458304 SRRM2Q9UQ35 2752 aaKnown RBP2.48□□□□□ -2.01
SPARCL1-204ENST00000458304 COA5Q86WW8 74 aa2.48□□□□□ -2.01
SPARCL1-204ENST00000458304 PKD1P98161 4303 aa2.48□□□□□ -2.01
SPARCL1-204ENST00000458304 DNAH17Q9UFH2 4485 aa2.48□□□□□ -2.01
SPARCL1-204ENST00000458304 DNAH2Q9P225 4427 aa2.47□□□□□ -2.01
SPARCL1-204ENST00000458304 KRTAP10-4P60372 401 aaPredicted RBP2.47□□□□□ -2.01
SPARCL1-204ENST00000458304 INE1O15225 51 aa2.46□□□□□ -2.02
SPARCL1-204ENST00000458304 KRTAP10-8P60410 259 aa2.46□□□□□ -2.02
SPARCL1-204ENST00000458304 ZCCHC13Q8WW36 166 aaKnown RBP2.46□□□□□ -2.02
SPARCL1-204ENST00000458304 C9orf92A6NGG3 77 aa2.45□□□□□ -2.02
SPARCL1-204ENST00000458304 ACYP2P14621 99 aa2.45□□□□□ -2.02
SPARCL1-204ENST00000458304 VPS13BQ7Z7G8 4022 aa2.45□□□□□ -2.02
SPARCL1-204ENST00000458304 HYDINQ4G0P3 5121 aa2.45□□□□□ -2.02
SPARCL1-204ENST00000458304 KRTAP5-9P26371 169 aa2.44□□□□□ -2.02
SPARCL1-204ENST00000458304 DNAH5Q8TE73 4624 aa2.44□□□□□ -2.02
SPARCL1-204ENST00000458304 PCOTHQ58A44 107 aa2.43□□□□□ -2.02
SPARCL1-204ENST00000458304 FAT2Q9NYQ8 4349 aa2.42□□□□□ -2.02
SPARCL1-204ENST00000458304 DNAH8Q96JB1 4490 aa2.42□□□□□ -2.02
SPARCL1-204ENST00000458304 PKHD1P08F94 4074 aa2.42□□□□□ -2.02
SPARCL1-204ENST00000458304 PRR15LQ9BU68 103 aa2.41□□□□□ -2.02
SPARCL1-204ENST00000458304 LINC01558Q9Y6Z2 57 aa2.41□□□□□ -2.02
SPARCL1-204ENST00000458304 DNAH11Q96DT5 4516 aa2.41□□□□□ -2.02
SPARCL1-204ENST00000458304 SACSQ9NZJ4 4579 aa2.41□□□□□ -2.02
SPARCL1-204ENST00000458304 RYR2Q92736 4967 aa2.4□□□□□ -2.03
SPARCL1-204ENST00000458304 RPL37P61927 97 aaKnown RBP2.4□□□□□ -2.03
SPARCL1-204ENST00000458304 UQCR11O14957 56 aa2.39□□□□□ -2.03
SPARCL1-204ENST00000458304 KMT2CQ8NEZ4 4911 aaKnown RBP2.39□□□□□ -2.03
SPARCL1-204ENST00000458304 LRP1BQ9NZR2 4599 aa2.39□□□□□ -2.03
SPARCL1-204ENST00000458304 KRTAP13-3Q3SY46 172 aa2.38□□□□□ -2.03
SPARCL1-204ENST00000458304 MT1HL1P0DM35 61 aa2.37□□□□□ -2.03
SPARCL1-204ENST00000458304 SPINK7P58062 85 aa2.37□□□□□ -2.03
SPARCL1-204ENST00000458304 LCE3EQ5T5B0 92 aa2.37□□□□□ -2.03
SPARCL1-204ENST00000458304 DYNC1H1Q14204 4646 aaKnown RBP2.36□□□□□ -2.03
SPARCL1-204ENST00000458304 FLG2Q5D862 2391 aaPredicted RBP2.36□□□□□ -2.03
SPARCL1-204ENST00000458304 DMBT1Q9UGM3 2413 aaPredicted RBP2.35□□□□□ -2.03
SPARCL1-204ENST00000458304 COX6B2Q6YFQ2 88 aa2.33□□□□□ -2.04
SPARCL1-204ENST00000458304 APOBP04114 4563 aaKnown RBP2.32□□□□□ -2.04
SPARCL1-204ENST00000458304 PKHD1L1Q86WI1 4243 aa2.32□□□□□ -2.04
SPARCL1-204ENST00000458304 A0A1B0GU69 56 aa2.32□□□□□ -2.04
SPARCL1-204ENST00000458304 S4R3F8 94 aa2.3□□□□□ -2.04
SPARCL1-204ENST00000458304 RYR3Q15413 4870 aa2.3□□□□□ -2.04
SPARCL1-204ENST00000458304 RYR1P21817 5038 aa2.3□□□□□ -2.04
SPARCL1-204ENST00000458304 H1FX-AS1Q4G0G2 97 aa2.29□□□□□ -2.04
SPARCL1-204ENST00000458304 PP632Q6XCG6 107 aa2.29□□□□□ -2.04
SPARCL1-204ENST00000458304 HSPG2P98160 4391 aa2.28□□□□□ -2.04
SPARCL1-204ENST00000458304 KRTAP12-2P59991 146 aa2.27□□□□□ -2.05
SPARCL1-204ENST00000458304 SPRR5A0A1B0GTR4 108 aa2.26□□□□□ -2.05
SPARCL1-204ENST00000458304 OBSCNQ5VST9 7968 aa2.25□□□□□ -2.05
SPARCL1-204ENST00000458304 KRTAP13-4Q3LI77 160 aa2.25□□□□□ -2.05
SPARCL1-204ENST00000458304 FAT1Q14517 4588 aa2.25□□□□□ -2.05
SPARCL1-204ENST00000458304 LCE3AQ5TA76 89 aa2.24□□□□□ -2.05
SPARCL1-204ENST00000458304 SPATA8Q6RVD6 105 aa2.24□□□□□ -2.05
SPARCL1-204ENST00000458304 TNXBP22105 4242 aa2.24□□□□□ -2.05
SPARCL1-204ENST00000458304 KRTAP4-3Q9BYR4 195 aa2.23□□□□□ -2.05
SPARCL1-204ENST00000458304 FAT3Q8TDW7 4589 aa2.23□□□□□ -2.05
SPARCL1-204ENST00000458304 KIAA1109Q2LD37 5005 aa2.22□□□□□ -2.05
SPARCL1-204ENST00000458304 MYCBP2O75592 4640 aa2.21□□□□□ -2.06
SPARCL1-204ENST00000458304 LRP1Q07954 4544 aaKnown RBP2.21□□□□□ -2.06
SPARCL1-204ENST00000458304 EPPK1P58107 5090 aaKnown RBP2.2□□□□□ -2.06
SPARCL1-204ENST00000458304 BIRC6Q9NR09 4857 aa2.2□□□□□ -2.06
SPARCL1-204ENST00000458304 PLAC4Q8WY50 150 aa2.19□□□□□ -2.06
SPARCL1-204ENST00000458304 H0YAA0 97 aa2.18□□□□□ -2.06
SPARCL1-204ENST00000458304 M0R2T5 61 aa2.18□□□□□ -2.06
SPARCL1-204ENST00000458304 M0QZ58 72 aa2.17□□□□□ -2.06
SPARCL1-204ENST00000458304 CRIPTQ9P021 101 aa2.15□□□□□ -2.07
SPARCL1-204ENST00000458304 HERC2O95714 4834 aa2.15□□□□□ -2.07
SPARCL1-204ENST00000458304 KRTAP5-5Q701N2 237 aaPredicted RBP2.11□□□□□ -2.07
SPARCL1-204ENST00000458304 ABCA13Q86UQ4 5058 aa2.1□□□□□ -2.07
SPARCL1-204ENST00000458304 A0A0D9SG42 100 aa2.08□□□□□ -2.08
SPARCL1-204ENST00000458304 KRTAP5-2Q701N4 177 aa2.08□□□□□ -2.08
SPARCL1-204ENST00000458304 KRTAP4-1Q9BYQ7 146 aa2.07□□□□□ -2.08
SPARCL1-204ENST00000458304 KRTAP12-1P59990 96 aa2.06□□□□□ -2.08
SPARCL1-204ENST00000458304 LRP2P98164 4655 aa2.06□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms