RNA–Protein interactions for RNA: ENST00000454040.5

PCGEM1-201, PCGEM1, prostate-specific transcript, humanhuman

TSL 1 (best) BASIC

Gene PCGEM1, Length 1,590 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGEM1-201ENST00000454040 MGAM2Q2M2H8 2515 aa3.03□□□□□ -1.92
PCGEM1-201ENST00000454040 TENM2Q9NT68 2774 aa3.02□□□□□ -1.93
PCGEM1-201ENST00000454040 HRES1P13985 223 aa3.02□□□□□ -1.93
PCGEM1-201ENST00000454040 KRTAP10-8P60410 259 aa3.02□□□□□ -1.93
PCGEM1-201ENST00000454040 VPS13DQ5THJ4 4388 aa3.01□□□□□ -1.93
PCGEM1-201ENST00000454040 MRPL34Q9BQ48 92 aaKnown RBP3.01□□□□□ -1.93
PCGEM1-201ENST00000454040 DNAH7Q8WXX0 4024 aa3.01□□□□□ -1.93
PCGEM1-201ENST00000454040 KRTAP13-3Q3SY46 172 aa3□□□□□ -1.93
PCGEM1-201ENST00000454040 DNAH10Q8IVF4 4471 aa3□□□□□ -1.93
PCGEM1-201ENST00000454040 CSMD3Q7Z407 3707 aa3□□□□□ -1.93
PCGEM1-201ENST00000454040 SRRM2Q9UQ35 2752 aaKnown RBP3□□□□□ -1.93
PCGEM1-201ENST00000454040 LYSTQ99698 3801 aa2.99□□□□□ -1.93
PCGEM1-201ENST00000454040 DNAH6Q9C0G6 4158 aa2.98□□□□□ -1.93
PCGEM1-201ENST00000454040 TPRXLQ17RH7 258 aa2.98□□□□□ -1.93
PCGEM1-201ENST00000454040 HECTD4Q9Y4D8 3996 aa2.98□□□□□ -1.93
PCGEM1-201ENST00000454040 PRKDCP78527 4128 aaKnown RBP2.98□□□□□ -1.93
PCGEM1-201ENST00000454040 Q6ZSA8 131 aa2.97□□□□□ -1.93
PCGEM1-201ENST00000454040 SPINK7P58062 85 aa2.96□□□□□ -1.94
PCGEM1-201ENST00000454040 SPATA8Q6RVD6 105 aa2.96□□□□□ -1.94
PCGEM1-201ENST00000454040 PLECQ15149 4684 aaKnown RBP2.96□□□□□ -1.94
PCGEM1-201ENST00000454040 LY6G6CO95867 125 aa2.95□□□□□ -1.94
PCGEM1-201ENST00000454040 COA5Q86WW8 74 aa2.95□□□□□ -1.94
PCGEM1-201ENST00000454040 DNAH17Q9UFH2 4485 aa2.95□□□□□ -1.94
PCGEM1-201ENST00000454040 KRTAP21-3Q3LHN1 58 aa2.95□□□□□ -1.94
PCGEM1-201ENST00000454040 FBN3Q75N90 2809 aa2.94□□□□□ -1.94
PCGEM1-201ENST00000454040 KRTAP5-5Q701N2 237 aaPredicted RBP2.94□□□□□ -1.94
PCGEM1-201ENST00000454040 ANAPC11Q9NYG5 84 aa2.94□□□□□ -1.94
PCGEM1-201ENST00000454040 LCE3CQ5T5A8 94 aa2.93□□□□□ -1.94
PCGEM1-201ENST00000454040 STARD9Q9P2P6 4700 aa2.92□□□□□ -1.94
PCGEM1-201ENST00000454040 PCOTHQ58A44 107 aa2.92□□□□□ -1.94
PCGEM1-201ENST00000454040 SPINK1P00995 79 aa2.91□□□□□ -1.94
PCGEM1-201ENST00000454040 ACYP2P14621 99 aa2.91□□□□□ -1.94
PCGEM1-201ENST00000454040 RPS29P62273 56 aaKnown RBP2.91□□□□□ -1.94
PCGEM1-201ENST00000454040 SPINK6Q6UWN8 80 aa2.91□□□□□ -1.94
PCGEM1-201ENST00000454040 DNAH2Q9P225 4427 aa2.91□□□□□ -1.94
PCGEM1-201ENST00000454040 MEGF8Q7Z7M0 2845 aa2.91□□□□□ -1.94
PCGEM1-201ENST00000454040 KRTAP13-2Q52LG2 175 aa2.91□□□□□ -1.94
PCGEM1-201ENST00000454040 TGP01266 2768 aa2.9□□□□□ -1.94
PCGEM1-201ENST00000454040 KRTAP1-4P0C5Y4 121 aa2.9□□□□□ -1.95
PCGEM1-201ENST00000454040 KRTAP10-1P60331 282 aa2.9□□□□□ -1.95
PCGEM1-201ENST00000454040 LINC00304Q8N9R0 145 aa2.9□□□□□ -1.95
PCGEM1-201ENST00000454040 KMT2AQ03164 3969 aa2.89□□□□□ -1.95
PCGEM1-201ENST00000454040 FRAS1Q86XX4 4008 aa2.88□□□□□ -1.95
PCGEM1-201ENST00000454040 DNAH8Q96JB1 4490 aa2.88□□□□□ -1.95
PCGEM1-201ENST00000454040 LCE1CQ5T751 118 aa2.88□□□□□ -1.95
PCGEM1-201ENST00000454040 LCE1BQ5T7P3 118 aa2.88□□□□□ -1.95
PCGEM1-201ENST00000454040 ALMS1Q8TCU4 4167 aa2.88□□□□□ -1.95
PCGEM1-201ENST00000454040 INE1O15225 51 aa2.87□□□□□ -1.95
PCGEM1-201ENST00000454040 PKD1P98161 4303 aa2.84□□□□□ -1.95
PCGEM1-201ENST00000454040 DNAH11Q96DT5 4516 aa2.82□□□□□ -1.96
PCGEM1-201ENST00000454040 A0A1B0GU69 56 aa2.82□□□□□ -1.96
PCGEM1-201ENST00000454040 DNAH5Q8TE73 4624 aa2.8□□□□□ -1.96
PCGEM1-201ENST00000454040 DNHD1Q96M86 4753 aa2.8□□□□□ -1.96
PCGEM1-201ENST00000454040 VPS13BQ7Z7G8 4022 aa2.78□□□□□ -1.96
PCGEM1-201ENST00000454040 FAT2Q9NYQ8 4349 aa2.77□□□□□ -1.97
PCGEM1-201ENST00000454040 KRTAP10-4P60372 401 aaPredicted RBP2.77□□□□□ -1.97
PCGEM1-201ENST00000454040 LRP1BQ9NZR2 4599 aa2.75□□□□□ -1.97
PCGEM1-201ENST00000454040 SACSQ9NZJ4 4579 aa2.75□□□□□ -1.97
PCGEM1-201ENST00000454040 HYDINQ4G0P3 5121 aa2.73□□□□□ -1.97
PCGEM1-201ENST00000454040 SMR3BP02814 79 aaPredicted RBP2.73□□□□□ -1.97
PCGEM1-201ENST00000454040 PKHD1L1Q86WI1 4243 aa2.72□□□□□ -1.97
PCGEM1-201ENST00000454040 PKHD1P08F94 4074 aa2.7□□□□□ -1.98
PCGEM1-201ENST00000454040 C9orf92A6NGG3 77 aa2.7□□□□□ -1.98
PCGEM1-201ENST00000454040 COX6B2Q6YFQ2 88 aa2.7□□□□□ -1.98
PCGEM1-201ENST00000454040 PP632Q6XCG6 107 aa2.68□□□□□ -1.98
PCGEM1-201ENST00000454040 PLAC4Q8WY50 150 aa2.68□□□□□ -1.98
PCGEM1-201ENST00000454040 FLG2Q5D862 2391 aaPredicted RBP2.67□□□□□ -1.98
PCGEM1-201ENST00000454040 APOBP04114 4563 aaKnown RBP2.66□□□□□ -1.98
PCGEM1-201ENST00000454040 RPL37P61927 97 aaKnown RBP2.66□□□□□ -1.98
PCGEM1-201ENST00000454040 DYNC1H1Q14204 4646 aaKnown RBP2.65□□□□□ -1.99
PCGEM1-201ENST00000454040 H1FX-AS1Q4G0G2 97 aa2.65□□□□□ -1.99
PCGEM1-201ENST00000454040 LCE3EQ5T5B0 92 aa2.65□□□□□ -1.99
PCGEM1-201ENST00000454040 KRTAP12-2P59991 146 aa2.63□□□□□ -1.99
PCGEM1-201ENST00000454040 Q5VSD8 79 aa2.63□□□□□ -1.99
PCGEM1-201ENST00000454040 H0YAA0 97 aa2.62□□□□□ -1.99
PCGEM1-201ENST00000454040 TNXBP22105 4242 aa2.61□□□□□ -1.99
PCGEM1-201ENST00000454040 RYR2Q92736 4967 aa2.59□□□□□ -2
PCGEM1-201ENST00000454040 S4R3F8 94 aa2.58□□□□□ -2
PCGEM1-201ENST00000454040 MT1HL1P0DM35 61 aa2.57□□□□□ -2
PCGEM1-201ENST00000454040 FAT1Q14517 4588 aa2.57□□□□□ -2
PCGEM1-201ENST00000454040 HSPG2P98160 4391 aa2.55□□□□□ -2
PCGEM1-201ENST00000454040 FAT3Q8TDW7 4589 aa2.55□□□□□ -2
PCGEM1-201ENST00000454040 DMBT1Q9UGM3 2413 aaPredicted RBP2.53□□□□□ -2
PCGEM1-201ENST00000454040 HMCN1Q96RW7 5635 aa2.53□□□□□ -2
PCGEM1-201ENST00000454040 M0QZ58 72 aa2.51□□□□□ -2.01
PCGEM1-201ENST00000454040 CRIPTQ9P021 101 aa2.51□□□□□ -2.01
PCGEM1-201ENST00000454040 LRP1Q07954 4544 aaKnown RBP2.5□□□□□ -2.01
PCGEM1-201ENST00000454040 RYR1P21817 5038 aa2.49□□□□□ -2.01
PCGEM1-201ENST00000454040 KMT2CQ8NEZ4 4911 aaKnown RBP2.48□□□□□ -2.01
PCGEM1-201ENST00000454040 SPRR5A0A1B0GTR4 108 aa2.48□□□□□ -2.01
PCGEM1-201ENST00000454040 KRTAP13-4Q3LI77 160 aa2.48□□□□□ -2.01
PCGEM1-201ENST00000454040 RYR3Q15413 4870 aa2.45□□□□□ -2.02
PCGEM1-201ENST00000454040 A0A0D9SG42 100 aa2.44□□□□□ -2.02
PCGEM1-201ENST00000454040 KRTAP12-1P59990 96 aa2.44□□□□□ -2.02
PCGEM1-201ENST00000454040 MYCBP2O75592 4640 aa2.43□□□□□ -2.02
PCGEM1-201ENST00000454040 MUC19Q7Z5P9 8384 aa2.41□□□□□ -2.02
PCGEM1-201ENST00000454040 BIRC6Q9NR09 4857 aa2.39□□□□□ -2.03
PCGEM1-201ENST00000454040 KIAA1109Q2LD37 5005 aa2.38□□□□□ -2.03
PCGEM1-201ENST00000454040 EPPK1P58107 5090 aaKnown RBP2.36□□□□□ -2.03
PCGEM1-201ENST00000454040 LRP2P98164 4655 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms