RNA–Protein interactions for RNA: ENST00000451823.2

HMGB3P22-202, Transcript of high mobility group box 3 pseudogene 22, humanhuman

BASIC

Gene HMGB3P22, Length 572 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P22-202ENST00000451823 DNAH10Q8IVF4 4471 aa2.27□□□□□ -2.05
HMGB3P22-202ENST00000451823 A0A087WTM6 91 aa2.27□□□□□ -2.05
HMGB3P22-202ENST00000451823 SPINK6Q6UWN8 80 aa2.27□□□□□ -2.05
HMGB3P22-202ENST00000451823 Q6ZSA8 131 aa2.27□□□□□ -2.05
HMGB3P22-202ENST00000451823 UBE2DNLQ8IWF7 75 aa2.27□□□□□ -2.05
HMGB3P22-202ENST00000451823 DYNC2H1Q8NCM8 4307 aaKnown RBP2.27□□□□□ -2.05
HMGB3P22-202ENST00000451823 NBEAL1Q6ZS30 2694 aa2.27□□□□□ -2.05
HMGB3P22-202ENST00000451823 DNAH9Q9NYC9 4486 aa2.27□□□□□ -2.05
HMGB3P22-202ENST00000451823 H0YAA0 97 aa2.26□□□□□ -2.05
HMGB3P22-202ENST00000451823 LINC00304Q8N9R0 145 aa2.26□□□□□ -2.05
HMGB3P22-202ENST00000451823 DNAH17Q9UFH2 4485 aa2.26□□□□□ -2.05
HMGB3P22-202ENST00000451823 MEGF8Q7Z7M0 2845 aa2.25□□□□□ -2.05
HMGB3P22-202ENST00000451823 K7ERS5 55 aa2.25□□□□□ -2.05
HMGB3P22-202ENST00000451823 KRTAP13-2Q52LG2 175 aa2.25□□□□□ -2.05
HMGB3P22-202ENST00000451823 SRRM2Q9UQ35 2752 aaKnown RBP2.24□□□□□ -2.05
HMGB3P22-202ENST00000451823 CIRBP-AS1Q8TBR5 109 aa2.24□□□□□ -2.05
HMGB3P22-202ENST00000451823 LUZP6Q538Z0 58 aa2.23□□□□□ -2.05
HMGB3P22-202ENST00000451823 DNAH7Q8WXX0 4024 aa2.23□□□□□ -2.05
HMGB3P22-202ENST00000451823 PRKDCP78527 4128 aaKnown RBP2.22□□□□□ -2.05
HMGB3P22-202ENST00000451823 NUPR2A6NF83 97 aa2.22□□□□□ -2.05
HMGB3P22-202ENST00000451823 KRTAP1-4P0C5Y4 121 aa2.22□□□□□ -2.05
HMGB3P22-202ENST00000451823 H1FX-AS1Q4G0G2 97 aa2.22□□□□□ -2.05
HMGB3P22-202ENST00000451823 NOTCH1P46531 2555 aa2.22□□□□□ -2.05
HMGB3P22-202ENST00000451823 FBN3Q75N90 2809 aa2.22□□□□□ -2.05
HMGB3P22-202ENST00000451823 VPS13DQ5THJ4 4388 aa2.21□□□□□ -2.06
HMGB3P22-202ENST00000451823 A0A1B0GU33 70 aa2.21□□□□□ -2.06
HMGB3P22-202ENST00000451823 TYMSOSQ8TAI1 123 aa2.21□□□□□ -2.06
HMGB3P22-202ENST00000451823 P0C880 135 aa2.2□□□□□ -2.06
HMGB3P22-202ENST00000451823 KRTAP5-5Q701N2 237 aaPredicted RBP2.2□□□□□ -2.06
HMGB3P22-202ENST00000451823 RPS29P62273 56 aaKnown RBP2.19□□□□□ -2.06
HMGB3P22-202ENST00000451823 SPINK1P00995 79 aa2.18□□□□□ -2.06
HMGB3P22-202ENST00000451823 CAMK2N1Q7Z7J9 78 aa2.18□□□□□ -2.06
HMGB3P22-202ENST00000451823 C20orf166-AS1Q96NR2 134 aa2.18□□□□□ -2.06
HMGB3P22-202ENST00000451823 COL7A1Q02388 2944 aa2.18□□□□□ -2.06
HMGB3P22-202ENST00000451823 STAB2Q8WWQ8 2551 aa2.17□□□□□ -2.06
HMGB3P22-202ENST00000451823 LYSTQ99698 3801 aa2.17□□□□□ -2.06
HMGB3P22-202ENST00000451823 SACSQ9NZJ4 4579 aa2.16□□□□□ -2.06
HMGB3P22-202ENST00000451823 COX6B2Q6YFQ2 88 aa2.16□□□□□ -2.06
HMGB3P22-202ENST00000451823 CSMD3Q7Z407 3707 aa2.16□□□□□ -2.06
HMGB3P22-202ENST00000451823 PLECQ15149 4684 aaKnown RBP2.16□□□□□ -2.06
HMGB3P22-202ENST00000451823 DNAH11Q96DT5 4516 aa2.15□□□□□ -2.06
HMGB3P22-202ENST00000451823 DNAH2Q9P225 4427 aa2.15□□□□□ -2.07
HMGB3P22-202ENST00000451823 TPRXLQ17RH7 258 aa2.14□□□□□ -2.07
HMGB3P22-202ENST00000451823 STARD9Q9P2P6 4700 aa2.14□□□□□ -2.07
HMGB3P22-202ENST00000451823 DNAH6Q9C0G6 4158 aa2.13□□□□□ -2.07
HMGB3P22-202ENST00000451823 KRTAP10-1P60331 282 aa2.12□□□□□ -2.07
HMGB3P22-202ENST00000451823 RPL37P61927 97 aaKnown RBP2.12□□□□□ -2.07
HMGB3P22-202ENST00000451823 KRTAP13-4Q3LI77 160 aa2.12□□□□□ -2.07
HMGB3P22-202ENST00000451823 KMT2AQ03164 3969 aa2.12□□□□□ -2.07
HMGB3P22-202ENST00000451823 LCE1CQ5T751 118 aa2.11□□□□□ -2.07
HMGB3P22-202ENST00000451823 LCE1BQ5T7P3 118 aa2.11□□□□□ -2.07
HMGB3P22-202ENST00000451823 CRIPTQ9P021 101 aa2.11□□□□□ -2.07
HMGB3P22-202ENST00000451823 DNAH5Q8TE73 4624 aa2.1□□□□□ -2.07
HMGB3P22-202ENST00000451823 LRP1BQ9NZR2 4599 aa2.1□□□□□ -2.07
HMGB3P22-202ENST00000451823 HECTD4Q9Y4D8 3996 aa2.09□□□□□ -2.07
HMGB3P22-202ENST00000451823 TGP01266 2768 aa2.09□□□□□ -2.08
HMGB3P22-202ENST00000451823 FRAS1Q86XX4 4008 aa2.08□□□□□ -2.08
HMGB3P22-202ENST00000451823 FLG2Q5D862 2391 aaPredicted RBP2.08□□□□□ -2.08
HMGB3P22-202ENST00000451823 KRTAP10-4P60372 401 aaPredicted RBP2.06□□□□□ -2.08
HMGB3P22-202ENST00000451823 KMT2CQ8NEZ4 4911 aaKnown RBP2.05□□□□□ -2.08
HMGB3P22-202ENST00000451823 C9orf92A6NGG3 77 aa2.05□□□□□ -2.08
HMGB3P22-202ENST00000451823 SPINT4Q6UDR6 99 aa2.05□□□□□ -2.08
HMGB3P22-202ENST00000451823 C10orf95Q9H7T3 257 aa2.05□□□□□ -2.08
HMGB3P22-202ENST00000451823 S4R3F8 94 aa2.05□□□□□ -2.08
HMGB3P22-202ENST00000451823 FAT2Q9NYQ8 4349 aa2.05□□□□□ -2.08
HMGB3P22-202ENST00000451823 PKHD1L1Q86WI1 4243 aa2.05□□□□□ -2.08
HMGB3P22-202ENST00000451823 KRTAP12-1P59990 96 aa2.04□□□□□ -2.08
HMGB3P22-202ENST00000451823 PKD1P98161 4303 aa2.02□□□□□ -2.09
HMGB3P22-202ENST00000451823 RYR2Q92736 4967 aa2.02□□□□□ -2.09
HMGB3P22-202ENST00000451823 PKHD1P08F94 4074 aa2.02□□□□□ -2.09
HMGB3P22-202ENST00000451823 A0A0D9SG42 100 aa2.01□□□□□ -2.09
HMGB3P22-202ENST00000451823 HYDINQ4G0P3 5121 aa2.01□□□□□ -2.09
HMGB3P22-202ENST00000451823 M0QZ58 72 aa1.99□□□□□ -2.09
HMGB3P22-202ENST00000451823 APOBP04114 4563 aaKnown RBP1.98□□□□□ -2.09
HMGB3P22-202ENST00000451823 VPS13BQ7Z7G8 4022 aa1.98□□□□□ -2.09
HMGB3P22-202ENST00000451823 LRP1Q07954 4544 aaKnown RBP1.98□□□□□ -2.09
HMGB3P22-202ENST00000451823 RYR3Q15413 4870 aa1.97□□□□□ -2.09
HMGB3P22-202ENST00000451823 DYNC1H1Q14204 4646 aaKnown RBP1.97□□□□□ -2.09
HMGB3P22-202ENST00000451823 FAT3Q8TDW7 4589 aa1.96□□□□□ -2.1
HMGB3P22-202ENST00000451823 PRO2289Q9P1D8 64 aa1.95□□□□□ -2.1
HMGB3P22-202ENST00000451823 PP632Q6XCG6 107 aa1.94□□□□□ -2.1
HMGB3P22-202ENST00000451823 FAT1Q14517 4588 aa1.93□□□□□ -2.1
HMGB3P22-202ENST00000451823 SMR3BP02814 79 aaPredicted RBP1.93□□□□□ -2.1
HMGB3P22-202ENST00000451823 PLAC4Q8WY50 150 aa1.93□□□□□ -2.1
HMGB3P22-202ENST00000451823 HSPG2P98160 4391 aa1.93□□□□□ -2.1
HMGB3P22-202ENST00000451823 TNXBP22105 4242 aa1.93□□□□□ -2.1
HMGB3P22-202ENST00000451823 KRTAP5-8O75690 187 aa1.92□□□□□ -2.1
HMGB3P22-202ENST00000451823 DMBT1Q9UGM3 2413 aaPredicted RBP1.91□□□□□ -2.1
HMGB3P22-202ENST00000451823 RYR1P21817 5038 aa1.91□□□□□ -2.1
HMGB3P22-202ENST00000451823 LCE3DQ9BYE3 92 aa1.9□□□□□ -2.11
HMGB3P22-202ENST00000451823 Q5VSD8 79 aa1.89□□□□□ -2.11
HMGB3P22-202ENST00000451823 MYCBP2O75592 4640 aa1.89□□□□□ -2.11
HMGB3P22-202ENST00000451823 SPRR5A0A1B0GTR4 108 aa1.88□□□□□ -2.11
HMGB3P22-202ENST00000451823 BIRC6Q9NR09 4857 aa1.88□□□□□ -2.11
HMGB3P22-202ENST00000451823 EPPK1P58107 5090 aaKnown RBP1.87□□□□□ -2.11
HMGB3P22-202ENST00000451823 R4GN34 69 aa1.87□□□□□ -2.11
HMGB3P22-202ENST00000451823 MT1HL1P0DM35 61 aa1.86□□□□□ -2.11
HMGB3P22-202ENST00000451823 HERC2O95714 4834 aa1.86□□□□□ -2.11
HMGB3P22-202ENST00000451823 KIAA1109Q2LD37 5005 aa1.85□□□□□ -2.11
HMGB3P22-202ENST00000451823 INE1O15225 51 aa1.83□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms