RNA–Protein interactions for RNA: ENST00000441123.1

BRPF3-203, Transcript of bromodomain and PHD finger containing 3, humanhuman

TSL 1 (best)

Gene BRPF3, Length 5,380 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3-203ENST00000441123 VPS13DQ5THJ4 4388 aa5.62□□□□□ -1.51
BRPF3-203ENST00000441123 DNAH10Q8IVF4 4471 aa5.62□□□□□ -1.51
BRPF3-203ENST00000441123 KRTAP10-12P60413 245 aa5.62□□□□□ -1.51
BRPF3-203ENST00000441123 KRTAP4-5Q9BYR2 181 aa5.61□□□□□ -1.51
BRPF3-203ENST00000441123 DNAH3Q8TD57 4116 aa5.59□□□□□ -1.51
BRPF3-203ENST00000441123 PLECQ15149 4684 aaKnown RBP5.56□□□□□ -1.52
BRPF3-203ENST00000441123 DNAH5Q8TE73 4624 aa5.54□□□□□ -1.52
BRPF3-203ENST00000441123 CRCT1Q9UGL9 99 aa5.53□□□□□ -1.52
BRPF3-203ENST00000441123 COL7A1Q02388 2944 aa5.51□□□□□ -1.53
BRPF3-203ENST00000441123 DNAH11Q96DT5 4516 aa5.51□□□□□ -1.53
BRPF3-203ENST00000441123 LORP23490 312 aaPredicted RBP5.5□□□□□ -1.53
BRPF3-203ENST00000441123 ZNF469Q96JG9 3925 aaPredicted RBP5.5□□□□□ -1.53
BRPF3-203ENST00000441123 KRTAP12-3P60328 96 aa5.48□□□□□ -1.53
BRPF3-203ENST00000441123 LCE3AQ5TA76 89 aa5.45□□□□□ -1.54
BRPF3-203ENST00000441123 DYNC2H1Q8NCM8 4307 aaKnown RBP5.42□□□□□ -1.54
BRPF3-203ENST00000441123 DNAH6Q9C0G6 4158 aa5.4□□□□□ -1.54
BRPF3-203ENST00000441123 SACSQ9NZJ4 4579 aa5.37□□□□□ -1.55
BRPF3-203ENST00000441123 DNAH8Q96JB1 4490 aa5.37□□□□□ -1.55
BRPF3-203ENST00000441123 DYNC1H1Q14204 4646 aaKnown RBP5.37□□□□□ -1.55
BRPF3-203ENST00000441123 KRTAP4-1Q9BYQ7 146 aa5.32□□□□□ -1.56
BRPF3-203ENST00000441123 STARD9Q9P2P6 4700 aa5.31□□□□□ -1.56
BRPF3-203ENST00000441123 FAT2Q9NYQ8 4349 aa5.31□□□□□ -1.56
BRPF3-203ENST00000441123 ANK2Q01484 3957 aa5.29□□□□□ -1.56
BRPF3-203ENST00000441123 LRP1BQ9NZR2 4599 aa5.28□□□□□ -1.56
BRPF3-203ENST00000441123 SPRR2GQ9BYE4 73 aa5.27□□□□□ -1.57
BRPF3-203ENST00000441123 CSMD3Q7Z407 3707 aa5.22□□□□□ -1.57
BRPF3-203ENST00000441123 MT1HP80294 61 aa5.22□□□□□ -1.57
BRPF3-203ENST00000441123 KRTAP8-1Q8IUC2 63 aa5.2□□□□□ -1.58
BRPF3-203ENST00000441123 CMYA5Q8N3K9 4069 aa5.19□□□□□ -1.58
BRPF3-203ENST00000441123 PRKDCP78527 4128 aaKnown RBP5.16□□□□□ -1.58
BRPF3-203ENST00000441123 DNAH7Q8WXX0 4024 aa5.16□□□□□ -1.58
BRPF3-203ENST00000441123 MT2AP02795 61 aa5.15□□□□□ -1.58
BRPF3-203ENST00000441123 VPS13BQ7Z7G8 4022 aa5.07□□□□□ -1.6
BRPF3-203ENST00000441123 KRTAP10-5P60370 271 aa5.07□□□□□ -1.6
BRPF3-203ENST00000441123 FAT1Q14517 4588 aa5.06□□□□□ -1.6
BRPF3-203ENST00000441123 KMT2AQ03164 3969 aa5.04□□□□□ -1.6
BRPF3-203ENST00000441123 DNHD1Q96M86 4753 aa5.04□□□□□ -1.6
BRPF3-203ENST00000441123 HECTD4Q9Y4D8 3996 aa5.04□□□□□ -1.6
BRPF3-203ENST00000441123 KRTAP19-4Q3LI73 84 aa5.04□□□□□ -1.6
BRPF3-203ENST00000441123 MT1FP04733 61 aa5.03□□□□□ -1.6
BRPF3-203ENST00000441123 APOBP04114 4563 aaKnown RBP5.03□□□□□ -1.6
BRPF3-203ENST00000441123 KRTAP19-8Q3LI54 63 aa4.93□□□□□ -1.62
BRPF3-203ENST00000441123 FAT3Q8TDW7 4589 aa4.93□□□□□ -1.62
BRPF3-203ENST00000441123 HSPG2P98160 4391 aa4.92□□□□□ -1.62
BRPF3-203ENST00000441123 RYR1P21817 5038 aa4.91□□□□□ -1.62
BRPF3-203ENST00000441123 FRAS1Q86XX4 4008 aa4.91□□□□□ -1.62
BRPF3-203ENST00000441123 RYR2Q92736 4967 aa4.91□□□□□ -1.62
BRPF3-203ENST00000441123 LCE3CQ5T5A8 94 aa4.9□□□□□ -1.63
BRPF3-203ENST00000441123 KRTAP19-5Q3LI72 72 aa4.89□□□□□ -1.63
BRPF3-203ENST00000441123 RYR3Q15413 4870 aa4.86□□□□□ -1.63
BRPF3-203ENST00000441123 KRTAP17-1Q9BYP8 105 aa4.86□□□□□ -1.63
BRPF3-203ENST00000441123 KRTAP19-1Q8IUB9 90 aa4.86□□□□□ -1.63
BRPF3-203ENST00000441123 HERC1Q15751 4861 aa4.85□□□□□ -1.63
BRPF3-203ENST00000441123 SPRR2FQ96RM1 72 aa4.84□□□□□ -1.63
BRPF3-203ENST00000441123 MYCBP2O75592 4640 aa4.83□□□□□ -1.64
BRPF3-203ENST00000441123 LYSTQ99698 3801 aa4.81□□□□□ -1.64
BRPF3-203ENST00000441123 KRTAP10-7P60409 375 aaPredicted RBP4.8□□□□□ -1.64
BRPF3-203ENST00000441123 SPRR5A0A1B0GTR4 108 aa4.74□□□□□ -1.65
BRPF3-203ENST00000441123 PKHD1L1Q86WI1 4243 aa4.73□□□□□ -1.65
BRPF3-203ENST00000441123 MT1XP80297 61 aa4.73□□□□□ -1.65
BRPF3-203ENST00000441123 LRP1Q07954 4544 aaKnown RBP4.72□□□□□ -1.65
BRPF3-203ENST00000441123 MT1BP07438 61 aa4.68□□□□□ -1.66
BRPF3-203ENST00000441123 KRTAP9-8Q9BYQ0 159 aa4.67□□□□□ -1.66
BRPF3-203ENST00000441123 PKD1P98161 4303 aa4.65□□□□□ -1.67
BRPF3-203ENST00000441123 LCE2CQ5TA81 110 aa4.64□□□□□ -1.67
BRPF3-203ENST00000441123 HYDINQ4G0P3 5121 aa4.62□□□□□ -1.67
BRPF3-203ENST00000441123 KIAA1109Q2LD37 5005 aa4.61□□□□□ -1.67
BRPF3-203ENST00000441123 PKHD1P08F94 4074 aa4.59□□□□□ -1.67
BRPF3-203ENST00000441123 TNXBP22105 4242 aa4.57□□□□□ -1.68
BRPF3-203ENST00000441123 KRTAP9-3Q9BYQ3 159 aa4.57□□□□□ -1.68
BRPF3-203ENST00000441123 SPRR2EP22531 72 aa4.55□□□□□ -1.68
BRPF3-203ENST00000441123 SPRR2BP35325 72 aa4.55□□□□□ -1.68
BRPF3-203ENST00000441123 SPRR2AP35326 72 aa4.55□□□□□ -1.68
BRPF3-203ENST00000441123 KRTAP19-2Q3LHN2 52 aa4.53□□□□□ -1.68
BRPF3-203ENST00000441123 MUC17Q685J3 4493 aa4.52□□□□□ -1.69
BRPF3-203ENST00000441123 BIRC6Q9NR09 4857 aa4.47□□□□□ -1.69
BRPF3-203ENST00000441123 MT1GP13640 62 aa4.42□□□□□ -1.7
BRPF3-203ENST00000441123 SPRR2DP22532 72 aa4.41□□□□□ -1.7
BRPF3-203ENST00000441123 HERC2O95714 4834 aa4.4□□□□□ -1.71
BRPF3-203ENST00000441123 LRP2P98164 4655 aa4.4□□□□□ -1.71
BRPF3-203ENST00000441123 LCE3BQ5TA77 95 aa4.38□□□□□ -1.71
BRPF3-203ENST00000441123 FLGP20930 4061 aaPredicted RBP4.37□□□□□ -1.71
BRPF3-203ENST00000441123 LCE2BO14633 110 aa4.37□□□□□ -1.71
BRPF3-203ENST00000441123 KRTAP4-8A0A0G2JLE6 195 aa4.35□□□□□ -1.71
BRPF3-203ENST00000441123 KRTAP4-8Q9BYQ9 185 aa4.35□□□□□ -1.71
BRPF3-203ENST00000441123 LPAP08519 4548 aa4.32□□□□□ -1.72
BRPF3-203ENST00000441123 KRTAP12-4P60329 112 aa4.32□□□□□ -1.72
BRPF3-203ENST00000441123 KMT2CQ8NEZ4 4911 aaKnown RBP4.3□□□□□ -1.72
BRPF3-203ENST00000441123 MT1LQ93083 61 aa4.28□□□□□ -1.72
BRPF3-203ENST00000441123 KRTAP19-3Q7Z4W3 81 aa4.25□□□□□ -1.73
BRPF3-203ENST00000441123 MT1EP04732 61 aa4.25□□□□□ -1.73
BRPF3-203ENST00000441123 PCLOQ9Y6V0 5065 aa4.21□□□□□ -1.74
BRPF3-203ENST00000441123 LCE3DQ9BYE3 92 aa4.17□□□□□ -1.74
BRPF3-203ENST00000441123 KRTAP19-6Q3LI70 58 aa4.14□□□□□ -1.75
BRPF3-203ENST00000441123 LCE3EQ5T5B0 92 aa4.13□□□□□ -1.75
BRPF3-203ENST00000441123 KRTAP4-7Q9BYR0 210 aa4.1□□□□□ -1.75
BRPF3-203ENST00000441123 MT1MQ8N339 61 aa4.08□□□□□ -1.76
BRPF3-203ENST00000441123 LCE2DQ5TA82 110 aaPredicted RBP4.05□□□□□ -1.76
BRPF3-203ENST00000441123 ABCA13Q86UQ4 5058 aa4.03□□□□□ -1.76
BRPF3-203ENST00000441123 LCE2AQ5TA79 106 aaPredicted RBP3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms