RNA–Protein interactions for RNA: ENST00000437242.1

HMGB1P31-201, Transcript of high mobility group box 1 pseudogene 31, humanhuman

BASIC

Gene HMGB1P31, Length 427 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P31-201ENST00000437242 SPINK8P0C7L1 97 aa0.79□□□□□ -2.28
HMGB1P31-201ENST00000437242 PDE6GP18545 87 aa0.79□□□□□ -2.28
HMGB1P31-201ENST00000437242 SPRR1BP22528 89 aa0.79□□□□□ -2.28
HMGB1P31-201ENST00000437242 ATXN8Q156A1 80 aa0.79□□□□□ -2.28
HMGB1P31-201ENST00000437242 LINC00575Q6W349 94 aa0.79□□□□□ -2.28
HMGB1P31-201ENST00000437242 C5orf38Q86SI9 138 aa0.79□□□□□ -2.28
HMGB1P31-201ENST00000437242 DIRC1Q969H9 104 aa0.79□□□□□ -2.28
HMGB1P31-201ENST00000437242 KCNQ1DNQ9H478 68 aa0.79□□□□□ -2.28
HMGB1P31-201ENST00000437242 C6orf48Q9UBA6 75 aa0.79□□□□□ -2.28
HMGB1P31-201ENST00000437242 PKIGQ9Y2B9 76 aa0.79□□□□□ -2.28
HMGB1P31-201ENST00000437242 AHNAKQ09666 5890 aaKnown RBP0.79□□□□□ -2.28
HMGB1P31-201ENST00000437242 TRBV7-4A0A0J9YYF1 115 aa0.78□□□□□ -2.28
HMGB1P31-201ENST00000437242 TRBV7-7A0A0K0K1E9 115 aa0.78□□□□□ -2.28
HMGB1P31-201ENST00000437242 K7ERJ3 54 aa0.78□□□□□ -2.28
HMGB1P31-201ENST00000437242 M0R378 163 aa0.78□□□□□ -2.28
HMGB1P31-201ENST00000437242 KRTAP2-3P0C7H8 128 aa0.78□□□□□ -2.28
HMGB1P31-201ENST00000437242 BAALC-AS2P0C853 105 aa0.78□□□□□ -2.28
HMGB1P31-201ENST00000437242 ELOF1P60002 83 aaKnown RBP0.78□□□□□ -2.28
HMGB1P31-201ENST00000437242 CKS1BP61024 79 aa0.78□□□□□ -2.28
HMGB1P31-201ENST00000437242 SPAG11BQ08648 103 aa0.78□□□□□ -2.28
HMGB1P31-201ENST00000437242 ETDBQ3ZM63 59 aa0.78□□□□□ -2.28
HMGB1P31-201ENST00000437242 Q6JHZ5 121 aa0.78□□□□□ -2.28
HMGB1P31-201ENST00000437242 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP0.78□□□□□ -2.28
HMGB1P31-201ENST00000437242 SMIM11BQ8TCY0 68 aa0.78□□□□□ -2.28
HMGB1P31-201ENST00000437242 RAB37Q96AX2 223 aa0.78□□□□□ -2.28
HMGB1P31-201ENST00000437242 SIGMAR1Q99720 223 aa0.78□□□□□ -2.28
HMGB1P31-201ENST00000437242 KRTAP2-4Q9BYR9 128 aa0.78□□□□□ -2.28
HMGB1P31-201ENST00000437242 AHNAK2Q8IVF2 5795 aa0.77□□□□□ -2.29
HMGB1P31-201ENST00000437242 LOC107984640A0A0U1RRK4 108 aa0.77□□□□□ -2.29
HMGB1P31-201ENST00000437242 hADV29S1A0JD25 119 aa0.77□□□□□ -2.29
HMGB1P31-201ENST00000437242 C9orf92A6NGG3 77 aa0.77□□□□□ -2.29
HMGB1P31-201ENST00000437242 C9JAW5 83 aa0.77□□□□□ -2.29
HMGB1P31-201ENST00000437242 SNCGO76070 127 aa0.77□□□□□ -2.29
HMGB1P31-201ENST00000437242 CCKP06307 115 aa0.77□□□□□ -2.29
HMGB1P31-201ENST00000437242 LINC00158P58513 81 aa0.77□□□□□ -2.29
HMGB1P31-201ENST00000437242 PRLHP81277 87 aa0.77□□□□□ -2.29
HMGB1P31-201ENST00000437242 LINC00643Q86TS7 51 aa0.77□□□□□ -2.29
HMGB1P31-201ENST00000437242 CLEC2BQ92478 149 aa0.77□□□□□ -2.29
HMGB1P31-201ENST00000437242 SPRR4Q96PI1 79 aa0.77□□□□□ -2.29
HMGB1P31-201ENST00000437242 ORMDL1Q9P0S3 153 aa0.77□□□□□ -2.29
HMGB1P31-201ENST00000437242 LINC00474Q9P2X8 69 aa0.77□□□□□ -2.29
HMGB1P31-201ENST00000437242 TRAV23DV6A0A075B6W5 121 aa0.76□□□□□ -2.29
HMGB1P31-201ENST00000437242 TEX49A0A1B0GTD5 131 aa0.76□□□□□ -2.29
HMGB1P31-201ENST00000437242 ERC2-IT1O76042 136 aa0.76□□□□□ -2.29
HMGB1P31-201ENST00000437242 COX7BP24311 80 aa0.76□□□□□ -2.29
HMGB1P31-201ENST00000437242 UBE2BP63146 152 aa0.76□□□□□ -2.29
HMGB1P31-201ENST00000437242 RBM3P98179 157 aaKnown RBP0.76□□□□□ -2.29
HMGB1P31-201ENST00000437242 S100A7L2Q5SY68 101 aa0.76□□□□□ -2.29
HMGB1P31-201ENST00000437242 ATP5EP2Q5VTU8 51 aa0.76□□□□□ -2.29
HMGB1P31-201ENST00000437242 Q5XG85 94 aa0.76□□□□□ -2.29
HMGB1P31-201ENST00000437242 Q6ZQT0 140 aa0.76□□□□□ -2.29
HMGB1P31-201ENST00000437242 Q6ZRX8 168 aa0.76□□□□□ -2.29
HMGB1P31-201ENST00000437242 TOMM7Q9P0U1 55 aa0.76□□□□□ -2.29
HMGB1P31-201ENST00000437242 DNAL4O96015 105 aa0.75□□□□□ -2.29
HMGB1P31-201ENST00000437242 SPRR2EP22531 72 aa0.75□□□□□ -2.29
HMGB1P31-201ENST00000437242 SPRR2BP35325 72 aa0.75□□□□□ -2.29
HMGB1P31-201ENST00000437242 SPRR2AP35326 72 aa0.75□□□□□ -2.29
HMGB1P31-201ENST00000437242 COX6B2Q6YFQ2 88 aa0.75□□□□□ -2.29
HMGB1P31-201ENST00000437242 SSBP3-AS1Q7Z2R9 100 aa0.75□□□□□ -2.29
HMGB1P31-201ENST00000437242 VPS25Q9BRG1 176 aa0.75□□□□□ -2.29
HMGB1P31-201ENST00000437242 KRTAP2-1Q9BYU5 128 aa0.75□□□□□ -2.29
HMGB1P31-201ENST00000437242 LINC00846Q9NV44 126 aa0.75□□□□□ -2.29
HMGB1P31-201ENST00000437242 SNURFQ9Y675 71 aa0.75□□□□□ -2.29
HMGB1P31-201ENST00000437242 A0A1B0GV72 72 aa0.74□□□□□ -2.29
HMGB1P31-201ENST00000437242 ATOX1O00244 68 aa0.74□□□□□ -2.29
HMGB1P31-201ENST00000437242 UQCRQO14949 82 aa0.74□□□□□ -2.29
HMGB1P31-201ENST00000437242 MT-ATP8P03928 68 aa0.74□□□□□ -2.29
HMGB1P31-201ENST00000437242 NPC2P61916 151 aa0.74□□□□□ -2.29
HMGB1P31-201ENST00000437242 RPS29P62273 56 aaKnown RBP0.74□□□□□ -2.29
HMGB1P31-201ENST00000437242 RPS28P62857 69 aaKnown RBP0.74□□□□□ -2.29
HMGB1P31-201ENST00000437242 KLKP1Q107X0 134 aa0.74□□□□□ -2.29
HMGB1P31-201ENST00000437242 Q6ZQY7 126 aa0.74□□□□□ -2.29
HMGB1P31-201ENST00000437242 SMIM20Q8N5G0 67 aa0.74□□□□□ -2.29
HMGB1P31-201ENST00000437242 OR13C6PQ8NH95 151 aa0.74□□□□□ -2.29
HMGB1P31-201ENST00000437242 DSCR8Q96T75 97 aa0.74□□□□□ -2.29
HMGB1P31-201ENST00000437242 UBL5Q9BZL1 73 aa0.74□□□□□ -2.29
HMGB1P31-201ENST00000437242 LINC00472Q9H8W2 130 aa0.74□□□□□ -2.29
HMGB1P31-201ENST00000437242 J3KT08 172 aa0.73□□□□□ -2.29
HMGB1P31-201ENST00000437242 NCR3O14931 201 aa0.73□□□□□ -2.29
HMGB1P31-201ENST00000437242 MT1BP07438 61 aa0.73□□□□□ -2.29
HMGB1P31-201ENST00000437242 COX7CP15954 63 aa0.73□□□□□ -2.29
HMGB1P31-201ENST00000437242 SERP2Q8N6R1 65 aa0.73□□□□□ -2.29
HMGB1P31-201ENST00000437242 C14orf132Q9NPU4 83 aa0.73□□□□□ -2.29
HMGB1P31-201ENST00000437242 ETDCA0A1B0GVM5 59 aa0.72□□□□□ -2.29
HMGB1P31-201ENST00000437242 NDUFC1O43677 76 aa0.72□□□□□ -2.29
HMGB1P31-201ENST00000437242 SPRR2DP22532 72 aa0.72□□□□□ -2.29
HMGB1P31-201ENST00000437242 RPL37P61927 97 aaKnown RBP0.72□□□□□ -2.29
HMGB1P31-201ENST00000437242 NREPQ16612 68 aa0.72□□□□□ -2.29
HMGB1P31-201ENST00000437242 HRCT1Q6UXD1 115 aa0.72□□□□□ -2.29
HMGB1P31-201ENST00000437242 PRR15Q8IV56 129 aa0.72□□□□□ -2.29
HMGB1P31-201ENST00000437242 Q96NJ1 140 aa0.72□□□□□ -2.29
HMGB1P31-201ENST00000437242 SPRR2FQ96RM1 72 aa0.72□□□□□ -2.29
HMGB1P31-201ENST00000437242 LAMTOR3Q9UHA4 124 aa0.72□□□□□ -2.29
HMGB1P31-201ENST00000437242 FAM236AA0A1B0GUQ0 79 aa0.71□□□□□ -2.3
HMGB1P31-201ENST00000437242 FAM236BA0A1B0GV22 79 aa0.71□□□□□ -2.3
HMGB1P31-201ENST00000437242 H7BZZ5 65 aa0.71□□□□□ -2.3
HMGB1P31-201ENST00000437242 SPAG11AQ6PDA7 123 aa0.71□□□□□ -2.3
HMGB1P31-201ENST00000437242 CYP4F30PQ9H0H9 118 aa0.71□□□□□ -2.3
HMGB1P31-201ENST00000437242 TP53AIP1Q9HCN2 124 aa0.71□□□□□ -2.3
HMGB1P31-201ENST00000437242 SS18L2Q9UHA2 77 aa0.71□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms