RNA–Protein interactions for RNA: ENST00000424307.5

PMS1-210, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5

Gene PMS1, Length 2,153 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-210ENST00000424307 H1FX-AS1Q4G0G2 97 aa0.49□□□□□ -2.33
PMS1-210ENST00000424307 NOP10Q9NPE3 64 aaKnown RBP0.49□□□□□ -2.33
PMS1-210ENST00000424307 SETD2Q9BYW2 2564 aaPredicted RBP0.49□□□□□ -2.33
PMS1-210ENST00000424307 COL6A5A8TX70 2615 aa0.49□□□□□ -2.33
PMS1-210ENST00000424307 PKHD1P08F94 4074 aa0.49□□□□□ -2.33
PMS1-210ENST00000424307 DNAH3Q8TD57 4116 aa0.49□□□□□ -2.33
PMS1-210ENST00000424307 PRKDCP78527 4128 aaKnown RBP0.49□□□□□ -2.33
PMS1-210ENST00000424307 HECTD1Q9ULT8 2610 aa0.49□□□□□ -2.33
PMS1-210ENST00000424307 APOBP04114 4563 aaKnown RBP0.49□□□□□ -2.33
PMS1-210ENST00000424307 A0A096LNI7 61 aa0.49□□□□□ -2.33
PMS1-210ENST00000424307 PRLHP81277 87 aa0.49□□□□□ -2.33
PMS1-210ENST00000424307 Q6ZRN7 208 aaPredicted RBP0.49□□□□□ -2.33
PMS1-210ENST00000424307 PKD1L2Q7Z442 2459 aa0.49□□□□□ -2.33
PMS1-210ENST00000424307 TLN1Q9Y490 2541 aaKnown RBP0.49□□□□□ -2.33
PMS1-210ENST00000424307 ZANQ9Y493 2812 aa0.48□□□□□ -2.33
PMS1-210ENST00000424307 COX6B2Q6YFQ2 88 aa0.48□□□□□ -2.33
PMS1-210ENST00000424307 PLAC4Q8WY50 150 aa0.48□□□□□ -2.33
PMS1-210ENST00000424307 USMG5Q96IX5 58 aa0.48□□□□□ -2.33
PMS1-210ENST00000424307 U3KQA8 63 aa0.48□□□□□ -2.33
PMS1-210ENST00000424307 DYNC2H1Q8NCM8 4307 aaKnown RBP0.48□□□□□ -2.33
PMS1-210ENST00000424307 ZNF292O60281 2723 aa0.48□□□□□ -2.33
PMS1-210ENST00000424307 PKHD1L1Q86WI1 4243 aa0.48□□□□□ -2.33
PMS1-210ENST00000424307 SETXQ7Z333 2677 aaKnown RBP0.47□□□□□ -2.33
PMS1-210ENST00000424307 RPL37P61927 97 aaKnown RBP0.47□□□□□ -2.33
PMS1-210ENST00000424307 KRTAP13-4Q3LI77 160 aa0.47□□□□□ -2.33
PMS1-210ENST00000424307 CHD8Q9HCK8 2581 aa0.47□□□□□ -2.33
PMS1-210ENST00000424307 NBEAL1Q6ZS30 2694 aa0.47□□□□□ -2.33
PMS1-210ENST00000424307 CENPEQ02224 2701 aa0.47□□□□□ -2.33
PMS1-210ENST00000424307 H3BUA1 57 aa0.47□□□□□ -2.33
PMS1-210ENST00000424307 C4orf3Q8WVX3 66 aa0.47□□□□□ -2.33
PMS1-210ENST00000424307 ZFYVE26Q68DK2 2539 aa0.47□□□□□ -2.33
PMS1-210ENST00000424307 TLN2Q9Y4G6 2542 aa0.47□□□□□ -2.33
PMS1-210ENST00000424307 BDP1A6H8Y1 2624 aa0.47□□□□□ -2.33
PMS1-210ENST00000424307 DOPEY1Q5JWR5 2465 aa0.47□□□□□ -2.33
PMS1-210ENST00000424307 MTORP42345 2549 aa0.46□□□□□ -2.34
PMS1-210ENST00000424307 PIEZO1Q92508 2521 aa0.46□□□□□ -2.34
PMS1-210ENST00000424307 VPS13BQ7Z7G8 4022 aa0.46□□□□□ -2.34
PMS1-210ENST00000424307 ITPR2Q14571 2701 aa0.46□□□□□ -2.34
PMS1-210ENST00000424307 CFAP46Q8IYW2 2715 aa0.46□□□□□ -2.34
PMS1-210ENST00000424307 A0A0D9SG42 100 aa0.46□□□□□ -2.34
PMS1-210ENST00000424307 H3BUX3 64 aa0.46□□□□□ -2.34
PMS1-210ENST00000424307 SPRR1BP22528 89 aa0.46□□□□□ -2.34
PMS1-210ENST00000424307 ANKHD1Q8IWZ3 2542 aaKnown RBP0.46□□□□□ -2.34
PMS1-210ENST00000424307 PKD1P98161 4303 aa0.46□□□□□ -2.34
PMS1-210ENST00000424307 GCN1Q92616 2671 aaKnown RBP0.46□□□□□ -2.34
PMS1-210ENST00000424307 USP9YO00507 2555 aaPredicted RBP0.46□□□□□ -2.34
PMS1-210ENST00000424307 HIVEP1P15822 2718 aa0.46□□□□□ -2.34
PMS1-210ENST00000424307 SPINK6Q6UWN8 80 aa0.46□□□□□ -2.34
PMS1-210ENST00000424307 PRO0255Q9UI72 69 aa0.46□□□□□ -2.34
PMS1-210ENST00000424307 APLNQ9ULZ1 77 aa0.46□□□□□ -2.34
PMS1-210ENST00000424307 S4R3F8 94 aa0.46□□□□□ -2.34
PMS1-210ENST00000424307 UNC79Q9P2D8 2635 aa0.46□□□□□ -2.34
PMS1-210ENST00000424307 ITPR3Q14573 2671 aa0.46□□□□□ -2.34
PMS1-210ENST00000424307 TGP01266 2768 aa0.46□□□□□ -2.34
PMS1-210ENST00000424307 FAT3Q8TDW7 4589 aa0.45□□□□□ -2.34
PMS1-210ENST00000424307 CACNA1AO00555 2505 aa0.45□□□□□ -2.34
PMS1-210ENST00000424307 EPG5Q9HCE0 2579 aa0.45□□□□□ -2.34
PMS1-210ENST00000424307 TENM4Q6N022 2769 aa0.45□□□□□ -2.34
PMS1-210ENST00000424307 FLNCQ14315 2725 aa0.45□□□□□ -2.34
PMS1-210ENST00000424307 HSPG2P98160 4391 aa0.45□□□□□ -2.34
PMS1-210ENST00000424307 LRRK2Q5S007 2527 aa0.45□□□□□ -2.34
PMS1-210ENST00000424307 INE1O15225 51 aa0.45□□□□□ -2.34
PMS1-210ENST00000424307 DEFB4AO15263 64 aa0.45□□□□□ -2.34
PMS1-210ENST00000424307 KRTAP12-1P59990 96 aa0.45□□□□□ -2.34
PMS1-210ENST00000424307 UBE2DNLQ8IWF7 75 aa0.45□□□□□ -2.34
PMS1-210ENST00000424307 DEFB123Q8N688 67 aa0.45□□□□□ -2.34
PMS1-210ENST00000424307 ATRQ13535 2644 aa0.44□□□□□ -2.34
PMS1-210ENST00000424307 POLQO75417 2590 aa0.44□□□□□ -2.34
PMS1-210ENST00000424307 FAT2Q9NYQ8 4349 aa0.44□□□□□ -2.34
PMS1-210ENST00000424307 NEBP20929 6669 aa0.44□□□□□ -2.34
PMS1-210ENST00000424307 PLECQ15149 4684 aaKnown RBP0.44□□□□□ -2.34
PMS1-210ENST00000424307 ANKRD11Q6UB99 2663 aaPredicted RBP0.44□□□□□ -2.34
PMS1-210ENST00000424307 NSD1Q96L73 2696 aaPredicted RBP0.44□□□□□ -2.34
PMS1-210ENST00000424307 HTN3P15516 51 aa0.43□□□□□ -2.34
PMS1-210ENST00000424307 ACANP16112 2415 aa0.43□□□□□ -2.34
PMS1-210ENST00000424307 TENM3Q9P273 2699 aa0.43□□□□□ -2.34
PMS1-210ENST00000424307 CEP295Q9C0D2 2601 aa0.43□□□□□ -2.34
PMS1-210ENST00000424307 USP24Q9UPU5 2620 aa0.43□□□□□ -2.34
PMS1-210ENST00000424307 DNAH5Q8TE73 4624 aa0.43□□□□□ -2.34
PMS1-210ENST00000424307 SACSQ9NZJ4 4579 aa0.43□□□□□ -2.34
PMS1-210ENST00000424307 LRP1Q07954 4544 aaKnown RBP0.43□□□□□ -2.34
PMS1-210ENST00000424307 STAB2Q8WWQ8 2551 aa0.43□□□□□ -2.34
PMS1-210ENST00000424307 FAT1Q14517 4588 aa0.43□□□□□ -2.34
PMS1-210ENST00000424307 TNXBP22105 4242 aa0.42□□□□□ -2.34
PMS1-210ENST00000424307 FLGP20930 4061 aaPredicted RBP0.42□□□□□ -2.34
PMS1-210ENST00000424307 TEP1Q99973 2627 aaKnown RBP0.42□□□□□ -2.34
PMS1-210ENST00000424307 MYO18BQ8IUG5 2567 aa0.42□□□□□ -2.34
PMS1-210ENST00000424307 MYO9AB2RTY4 2548 aa0.42□□□□□ -2.34
PMS1-210ENST00000424307 ACACBO00763 2458 aa0.42□□□□□ -2.34
PMS1-210ENST00000424307 DEFB135Q30KP9 77 aa0.42□□□□□ -2.34
PMS1-210ENST00000424307 LINC01556Q5JQF7 62 aa0.42□□□□□ -2.34
PMS1-210ENST00000424307 DYNC1H1Q14204 4646 aaKnown RBP0.41□□□□□ -2.34
PMS1-210ENST00000424307 NOTCH1P46531 2555 aa0.41□□□□□ -2.34
PMS1-210ENST00000424307 LRP1BQ9NZR2 4599 aa0.41□□□□□ -2.34
PMS1-210ENST00000424307 LPAP08519 4548 aa0.41□□□□□ -2.34
PMS1-210ENST00000424307 FASNP49327 2511 aaKnown RBP0.41□□□□□ -2.34
PMS1-210ENST00000424307 STARD9Q9P2P6 4700 aa0.41□□□□□ -2.34
PMS1-210ENST00000424307 STAB1Q9NY15 2570 aa0.41□□□□□ -2.34
PMS1-210ENST00000424307 SPART-AS1P0CW21 52 aa0.4□□□□□ -2.34
PMS1-210ENST00000424307 IGSF10Q6WRI0 2623 aa0.4□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 122.4 ms