RNA–Protein interactions for RNA: ENST00000418288.5

RFC4-205, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-205ENST00000418288 DNAH2Q9P225 4427 aa1.44□□□□□ -2.18
RFC4-205ENST00000418288 UBL5Q9BZL1 73 aa1.44□□□□□ -2.18
RFC4-205ENST00000418288 A0A0D9SG42 100 aa1.43□□□□□ -2.18
RFC4-205ENST00000418288 KRTAP5-5Q701N2 237 aaPredicted RBP1.43□□□□□ -2.18
RFC4-205ENST00000418288 NDUFA4O00483 81 aa1.42□□□□□ -2.18
RFC4-205ENST00000418288 COX7BP24311 80 aa1.42□□□□□ -2.18
RFC4-205ENST00000418288 PKD1P98161 4303 aa1.42□□□□□ -2.18
RFC4-205ENST00000418288 DNAH5Q8TE73 4624 aa1.42□□□□□ -2.18
RFC4-205ENST00000418288 TNCP24821 2201 aa1.42□□□□□ -2.18
RFC4-205ENST00000418288 ABRACLQ9P1F3 81 aa1.41□□□□□ -2.18
RFC4-205ENST00000418288 HMCN1Q96RW7 5635 aa1.41□□□□□ -2.18
RFC4-205ENST00000418288 DNAH17Q9UFH2 4485 aa1.4□□□□□ -2.18
RFC4-205ENST00000418288 AHNAKQ09666 5890 aaKnown RBP1.4□□□□□ -2.18
RFC4-205ENST00000418288 LRP1Q07954 4544 aaKnown RBP1.4□□□□□ -2.18
RFC4-205ENST00000418288 DSTQ03001 7570 aaKnown RBP1.4□□□□□ -2.19
RFC4-205ENST00000418288 SMIM27A0A1W2PRY6 76 aa1.4□□□□□ -2.19
RFC4-205ENST00000418288 KRTAP2-1Q9BYU5 128 aa1.4□□□□□ -2.19
RFC4-205ENST00000418288 IGIPA6NJ69 53 aa1.39□□□□□ -2.19
RFC4-205ENST00000418288 M0R1W7 72 aa1.39□□□□□ -2.19
RFC4-205ENST00000418288 TP53AIP1Q9HCN2 124 aa1.39□□□□□ -2.19
RFC4-205ENST00000418288 ARL14EPLP0DKL9 152 aa1.38□□□□□ -2.19
RFC4-205ENST00000418288 PLNP26678 52 aa1.38□□□□□ -2.19
RFC4-205ENST00000418288 DEFB133Q30KQ1 61 aa1.38□□□□□ -2.19
RFC4-205ENST00000418288 TNXBP22105 4242 aa1.37□□□□□ -2.19
RFC4-205ENST00000418288 DEFB114Q30KQ6 69 aa1.37□□□□□ -2.19
RFC4-205ENST00000418288 Q5VSD8 79 aa1.37□□□□□ -2.19
RFC4-205ENST00000418288 KRTAP5-7Q6L8G8 165 aa1.37□□□□□ -2.19
RFC4-205ENST00000418288 CNFNQ9BYD5 112 aa1.37□□□□□ -2.19
RFC4-205ENST00000418288 KCNQ1DNQ9H478 68 aa1.37□□□□□ -2.19
RFC4-205ENST00000418288 MUC5BQ9HC84 5762 aaPredicted RBP1.36□□□□□ -2.19
RFC4-205ENST00000418288 CPSF4LA6NMK7 179 aaKnown RBP1.36□□□□□ -2.19
RFC4-205ENST00000418288 I3L3M4 83 aa1.36□□□□□ -2.19
RFC4-205ENST00000418288 SERF2P84101 59 aa1.36□□□□□ -2.19
RFC4-205ENST00000418288 CRIPTQ9P021 101 aa1.36□□□□□ -2.19
RFC4-205ENST00000418288 LINC01546A6NGU7 62 aa1.35□□□□□ -2.19
RFC4-205ENST00000418288 ETDCA0A1B0GVM5 59 aa1.34□□□□□ -2.19
RFC4-205ENST00000418288 K7EQZ3 153 aa1.34□□□□□ -2.19
RFC4-205ENST00000418288 PRB3Q04118 309 aaPredicted RBP1.34□□□□□ -2.19
RFC4-205ENST00000418288 RPL38P63173 70 aaKnown RBP1.33□□□□□ -2.2
RFC4-205ENST00000418288 SPTY2D1-AS1A0A0U1RR47 76 aa1.32□□□□□ -2.2
RFC4-205ENST00000418288 PIGYQ3MUY2 71 aa1.32□□□□□ -2.2
RFC4-205ENST00000418288 KRTAP5-10Q6L8G5 202 aa1.32□□□□□ -2.2
RFC4-205ENST00000418288 DEFB131BA0A096LNP1 70 aa1.3□□□□□ -2.2
RFC4-205ENST00000418288 SPINK4O60575 86 aa1.3□□□□□ -2.2
RFC4-205ENST00000418288 CRIP1P50238 77 aa1.3□□□□□ -2.2
RFC4-205ENST00000418288 COX6A2Q02221 97 aa1.3□□□□□ -2.2
RFC4-205ENST00000418288 DEFB104AQ8WTQ1 72 aa1.3□□□□□ -2.2
RFC4-205ENST00000418288 PRO0255Q9UI72 69 aa1.3□□□□□ -2.2
RFC4-205ENST00000418288 MDN1Q9NU22 5596 aa1.29□□□□□ -2.2
RFC4-205ENST00000418288 TIMM8BQ9Y5J9 83 aaPredicted RBP1.29□□□□□ -2.2
RFC4-205ENST00000418288 DEFB108AA8MXU0 73 aa1.28□□□□□ -2.2
RFC4-205ENST00000418288 H0YGX0 51 aa1.28□□□□□ -2.2
RFC4-205ENST00000418288 MRPL33O75394 65 aaKnown RBP1.28□□□□□ -2.2
RFC4-205ENST00000418288 SNRPGP62308 76 aaKnown RBP1.28□□□□□ -2.2
RFC4-205ENST00000418288 USMG5Q96IX5 58 aa1.28□□□□□ -2.2
RFC4-205ENST00000418288 NDUFA3O95167 84 aa1.27□□□□□ -2.21
RFC4-205ENST00000418288 Q8IZM0 81 aa1.27□□□□□ -2.21
RFC4-205ENST00000418288 LPAP08519 4548 aa1.27□□□□□ -2.21
RFC4-205ENST00000418288 MRPL34Q9BQ48 92 aaKnown RBP1.26□□□□□ -2.21
RFC4-205ENST00000418288 CDKN2A-AS1Q9UH64 79 aa1.26□□□□□ -2.21
RFC4-205ENST00000418288 LCE1CQ5T751 118 aa1.25□□□□□ -2.21
RFC4-205ENST00000418288 LCE1BQ5T7P3 118 aa1.25□□□□□ -2.21
RFC4-205ENST00000418288 LINC00158P58513 81 aa1.24□□□□□ -2.21
RFC4-205ENST00000418288 SMR3BP02814 79 aaPredicted RBP1.23□□□□□ -2.21
RFC4-205ENST00000418288 SPRR1AP35321 89 aa1.22□□□□□ -2.21
RFC4-205ENST00000418288 MUC5ACP98088 5654 aa1.21□□□□□ -2.22
RFC4-205ENST00000418288 COX6B2Q6YFQ2 88 aa1.21□□□□□ -2.22
RFC4-205ENST00000418288 TMEM167BQ9NRX6 74 aa1.21□□□□□ -2.22
RFC4-205ENST00000418288 LYNX1G3V0Z9 82 aa1.2□□□□□ -2.22
RFC4-205ENST00000418288 H0YAA0 97 aa1.2□□□□□ -2.22
RFC4-205ENST00000418288 LINC00308Q8TCZ7 52 aa1.2□□□□□ -2.22
RFC4-205ENST00000418288 CCL22O00626 93 aa1.18□□□□□ -2.22
RFC4-205ENST00000418288 MT1HL1P0DM35 61 aa1.18□□□□□ -2.22
RFC4-205ENST00000418288 SPRR1BP22528 89 aa1.18□□□□□ -2.22
RFC4-205ENST00000418288 DNAH8Q96JB1 4490 aa1.18□□□□□ -2.22
RFC4-205ENST00000418288 SMIM2Q9BVW6 85 aa1.16□□□□□ -2.22
RFC4-205ENST00000418288 MUC17Q685J3 4493 aa1.16□□□□□ -2.22
RFC4-205ENST00000418288 MINOS1Q5TGZ0 78 aa1.15□□□□□ -2.23
RFC4-205ENST00000418288 NDUFA1O15239 70 aa1.14□□□□□ -2.23
RFC4-205ENST00000418288 APLNQ9ULZ1 77 aa1.14□□□□□ -2.23
RFC4-205ENST00000418288 KRTAP19-6Q3LI70 58 aa1.13□□□□□ -2.23
RFC4-205ENST00000418288 H1FX-AS1Q4G0G2 97 aa1.13□□□□□ -2.23
RFC4-205ENST00000418288 DEFB105AQ8NG35 78 aa1.13□□□□□ -2.23
RFC4-205ENST00000418288 C6orf48Q9UBA6 75 aa1.13□□□□□ -2.23
RFC4-205ENST00000418288 MUC19Q7Z5P9 8384 aa1.11□□□□□ -2.23
RFC4-205ENST00000418288 DEFB130BP0DP73 79 aa1.1□□□□□ -2.23
RFC4-205ENST00000418288 DEFB130AP0DP74 79 aa1.1□□□□□ -2.23
RFC4-205ENST00000418288 IAPPP10997 89 aa1.1□□□□□ -2.23
RFC4-205ENST00000418288 SPRR2EP22531 72 aa1.1□□□□□ -2.23
RFC4-205ENST00000418288 SPRR2BP35325 72 aa1.1□□□□□ -2.23
RFC4-205ENST00000418288 SPRR2AP35326 72 aa1.1□□□□□ -2.23
RFC4-205ENST00000418288 RPS27P42677 84 aaKnown RBP1.1□□□□□ -2.23
RFC4-205ENST00000418288 RPS27LQ71UM5 84 aaKnown RBP1.1□□□□□ -2.23
RFC4-205ENST00000418288 WFDC13Q8IUB5 93 aa1.1□□□□□ -2.23
RFC4-205ENST00000418288 KLK9Q2XQG4 91 aa1.09□□□□□ -2.23
RFC4-205ENST00000418288 SPRR2DP22532 72 aa1.07□□□□□ -2.24
RFC4-205ENST00000418288 MT1HP80294 61 aa1.07□□□□□ -2.24
RFC4-205ENST00000418288 KRTAP19-3Q7Z4W3 81 aa1.05□□□□□ -2.24
RFC4-205ENST00000418288 WFDC10BQ8IUB3 73 aa1.05□□□□□ -2.24
RFC4-205ENST00000418288 DEFB108BQ8NET1 73 aa1.05□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms