RNA–Protein interactions for RNA: ENST00000414978.5

MCF2-204, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,813 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-204ENST00000414978 LCE1EQ5T753 118 aa1.28□□□□□ -2.2
MCF2-204ENST00000414978 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.28□□□□□ -2.2
MCF2-204ENST00000414978 Q6ZQY7 126 aa1.28□□□□□ -2.2
MCF2-204ENST00000414978 SPTSSBQ8NFR3 76 aa1.28□□□□□ -2.2
MCF2-204ENST00000414978 JMJD7-PLA2G4BH0Y9G9 81 aa1.28□□□□□ -2.21
MCF2-204ENST00000414978 ASB16-AS1Q495Z4 193 aa1.28□□□□□ -2.21
MCF2-204ENST00000414978 LCE3DQ9BYE3 92 aa1.28□□□□□ -2.21
MCF2-204ENST00000414978 C14orf132Q9NPU4 83 aa1.28□□□□□ -2.21
MCF2-204ENST00000414978 ACYP1P07311 99 aa1.27□□□□□ -2.21
MCF2-204ENST00000414978 Q6ZRX8 168 aa1.27□□□□□ -2.21
MCF2-204ENST00000414978 SPRR5A0A1B0GTR4 108 aa1.27□□□□□ -2.21
MCF2-204ENST00000414978 ERC2-IT1O76042 136 aa1.27□□□□□ -2.21
MCF2-204ENST00000414978 SPRR1AP35321 89 aa1.27□□□□□ -2.21
MCF2-204ENST00000414978 RBM3P98179 157 aaKnown RBP1.27□□□□□ -2.21
MCF2-204ENST00000414978 Q1T7F1 81 aa1.27□□□□□ -2.21
MCF2-204ENST00000414978 DEFB105AQ8NG35 78 aa1.27□□□□□ -2.21
MCF2-204ENST00000414978 OBSCN-AS1Q96MR7 158 aa1.27□□□□□ -2.21
MCF2-204ENST00000414978 DSCR8Q96T75 97 aa1.27□□□□□ -2.21
MCF2-204ENST00000414978 PSORS1C2Q9UIG4 136 aa1.27□□□□□ -2.21
MCF2-204ENST00000414978 NEBP20929 6669 aa1.27□□□□□ -2.21
MCF2-204ENST00000414978 CCKP06307 115 aa1.26□□□□□ -2.21
MCF2-204ENST00000414978 PDE6GP18545 87 aa1.26□□□□□ -2.21
MCF2-204ENST00000414978 LOC110117498A0A087WWA1 95 aa1.26□□□□□ -2.21
MCF2-204ENST00000414978 KRTAP10-5P60370 271 aa1.26□□□□□ -2.21
MCF2-204ENST00000414978 PRLHP81277 87 aa1.26□□□□□ -2.21
MCF2-204ENST00000414978 F8WEM9 126 aa1.25□□□□□ -2.21
MCF2-204ENST00000414978 KRTAP2-3P0C7H8 128 aa1.25□□□□□ -2.21
MCF2-204ENST00000414978 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.25□□□□□ -2.21
MCF2-204ENST00000414978 SPINK6Q6UWN8 80 aa1.25□□□□□ -2.21
MCF2-204ENST00000414978 KRTAP2-4Q9BYR9 128 aa1.25□□□□□ -2.21
MCF2-204ENST00000414978 BCE1O60756 84 aa1.25□□□□□ -2.21
MCF2-204ENST00000414978 LINC00643Q86TS7 51 aa1.25□□□□□ -2.21
MCF2-204ENST00000414978 UBL5Q9BZL1 73 aa1.25□□□□□ -2.21
MCF2-204ENST00000414978 IGLV5-48A0A075B6I7 105 aa1.25□□□□□ -2.21
MCF2-204ENST00000414978 PLAC8Q9NZF1 115 aa1.25□□□□□ -2.21
MCF2-204ENST00000414978 TRBV7-4A0A0J9YYF1 115 aa1.24□□□□□ -2.21
MCF2-204ENST00000414978 CSAG1Q6PB30 78 aa1.24□□□□□ -2.21
MCF2-204ENST00000414978 TRBV7-7A0A0K0K1E9 115 aa1.24□□□□□ -2.21
MCF2-204ENST00000414978 C1orf137Q5JT78 98 aa1.24□□□□□ -2.21
MCF2-204ENST00000414978 ATP5EP2Q5VTU8 51 aa1.24□□□□□ -2.21
MCF2-204ENST00000414978 Q6JHZ5 121 aa1.24□□□□□ -2.21
MCF2-204ENST00000414978 IGKV3D-7A0A0C4DH55 119 aa1.23□□□□□ -2.21
MCF2-204ENST00000414978 HAMPP81172 84 aa1.23□□□□□ -2.21
MCF2-204ENST00000414978 SPRR1BP22528 89 aa1.23□□□□□ -2.21
MCF2-204ENST00000414978 NREPQ16612 68 aa1.23□□□□□ -2.21
MCF2-204ENST00000414978 KRTAP13-1Q8IUC0 172 aa1.23□□□□□ -2.21
MCF2-204ENST00000414978 C9orf153Q5TBE3 101 aa1.22□□□□□ -2.21
MCF2-204ENST00000414978 ATP11AUNQ6ZP68 121 aa1.22□□□□□ -2.21
MCF2-204ENST00000414978 KRTAP12-1P59990 96 aa1.22□□□□□ -2.21
MCF2-204ENST00000414978 SPRR4Q96PI1 79 aa1.22□□□□□ -2.21
MCF2-204ENST00000414978 SERP1Q9Y6X1 66 aa1.22□□□□□ -2.21
MCF2-204ENST00000414978 A0A087WVE0 104 aa1.21□□□□□ -2.22
MCF2-204ENST00000414978 KRTAP5-9P26371 169 aa1.21□□□□□ -2.22
MCF2-204ENST00000414978 KRTAP19-2Q3LHN2 52 aa1.21□□□□□ -2.22
MCF2-204ENST00000414978 SNURFQ9Y675 71 aa1.21□□□□□ -2.22
MCF2-204ENST00000414978 ATOX1O00244 68 aa1.21□□□□□ -2.22
MCF2-204ENST00000414978 LPAP08519 4548 aa1.2□□□□□ -2.22
MCF2-204ENST00000414978 COX7CP15954 63 aa1.2□□□□□ -2.22
MCF2-204ENST00000414978 LOC101927531A0A1B0GV80 90 aa1.2□□□□□ -2.22
MCF2-204ENST00000414978 KRTAP10-7P60409 375 aaPredicted RBP1.2□□□□□ -2.22
MCF2-204ENST00000414978 FLGP20930 4061 aaPredicted RBP1.2□□□□□ -2.22
MCF2-204ENST00000414978 MT1HP80294 61 aa1.19□□□□□ -2.22
MCF2-204ENST00000414978 SSBP3-AS1Q7Z2R9 100 aa1.19□□□□□ -2.22
MCF2-204ENST00000414978 SERP2Q8N6R1 65 aa1.19□□□□□ -2.22
MCF2-204ENST00000414978 K7EQZ3 153 aa1.19□□□□□ -2.22
MCF2-204ENST00000414978 NDUFB1O75438 58 aa1.19□□□□□ -2.22
MCF2-204ENST00000414978 KRTAP5-7Q6L8G8 165 aa1.19□□□□□ -2.22
MCF2-204ENST00000414978 HCG22E2RYF7 251 aa1.18□□□□□ -2.22
MCF2-204ENST00000414978 KRTAP19-6Q3LI70 58 aa1.18□□□□□ -2.22
MCF2-204ENST00000414978 LINC00472Q9H8W2 130 aa1.18□□□□□ -2.22
MCF2-204ENST00000414978 USH2AO75445 5202 aa1.18□□□□□ -2.22
MCF2-204ENST00000414978 OBSCNQ5VST9 7968 aa1.18□□□□□ -2.22
MCF2-204ENST00000414978 Q5VV11 94 aa1.17□□□□□ -2.22
MCF2-204ENST00000414978 WFDC13Q8IUB5 93 aa1.17□□□□□ -2.22
MCF2-204ENST00000414978 KRTAP4-4Q9BYR3 166 aa1.17□□□□□ -2.22
MCF2-204ENST00000414978 C20orf197Q8N268 126 aa1.17□□□□□ -2.22
MCF2-204ENST00000414978 Q96NJ1 140 aa1.17□□□□□ -2.22
MCF2-204ENST00000414978 PP632Q6XCG6 107 aa1.16□□□□□ -2.22
MCF2-204ENST00000414978 SPINK1P00995 79 aa1.16□□□□□ -2.22
MCF2-204ENST00000414978 MMP24-AS1A0A0U1RRL7 71 aa1.16□□□□□ -2.22
MCF2-204ENST00000414978 SPAG11AQ6PDA7 123 aa1.16□□□□□ -2.22
MCF2-204ENST00000414978 KRTAP2-1Q9BYU5 128 aa1.16□□□□□ -2.22
MCF2-204ENST00000414978 H7BZZ5 65 aa1.15□□□□□ -2.22
MCF2-204ENST00000414978 KRTAP13-3Q3SY46 172 aa1.15□□□□□ -2.22
MCF2-204ENST00000414978 NDUFC1O43677 76 aa1.15□□□□□ -2.23
MCF2-204ENST00000414978 KLKP1Q107X0 134 aa1.15□□□□□ -2.23
MCF2-204ENST00000414978 KRTAP5-2Q701N4 177 aa1.15□□□□□ -2.23
MCF2-204ENST00000414978 MRPL34Q9BQ48 92 aaKnown RBP1.15□□□□□ -2.23
MCF2-204ENST00000414978 KRTAP4-1Q9BYQ7 146 aa1.15□□□□□ -2.23
MCF2-204ENST00000414978 TP53AIP1Q9HCN2 124 aa1.15□□□□□ -2.23
MCF2-204ENST00000414978 KRTAP10-10P60014 251 aa1.14□□□□□ -2.23
MCF2-204ENST00000414978 RPS29P62273 56 aaKnown RBP1.14□□□□□ -2.23
MCF2-204ENST00000414978 LINC00208Q96KT6 92 aa1.14□□□□□ -2.23
MCF2-204ENST00000414978 AHNAK2Q8IVF2 5795 aa1.14□□□□□ -2.23
MCF2-204ENST00000414978 TRAV22A0A0B4J277 110 aa1.14□□□□□ -2.23
MCF2-204ENST00000414978 H0Y9P7 68 aa1.14□□□□□ -2.23
MCF2-204ENST00000414978 KRTAP13-4Q3LI77 160 aa1.13□□□□□ -2.23
MCF2-204ENST00000414978 ATP5EP56381 51 aaPredicted RBP1.13□□□□□ -2.23
MCF2-204ENST00000414978 FCGBPQ9Y6R7 5405 aaPredicted RBP1.12□□□□□ -2.23
MCF2-204ENST00000414978 ZCCHC13Q8WW36 166 aaKnown RBP1.12□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 1429.5 ms