RNA–Protein interactions for RNA: ENST00000407673.5

CACNA1I-204, Transcript of calcium voltage-gated channel subunit alpha1 I, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1I, Length 5,952 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1I-204ENST00000407673 CSMD2Q7Z408 3487 aa7.93□□□□□ -1.14
CACNA1I-204ENST00000407673 VPS13CQ709C8 3753 aa7.64□□□□□ -1.19
CACNA1I-204ENST00000407673 CSMD3Q7Z407 3707 aa7.63□□□□□ -1.19
CACNA1I-204ENST00000407673 KRTAP4-1Q9BYQ7 146 aa7.63□□□□□ -1.19
CACNA1I-204ENST00000407673 MT1HP80294 61 aa7.56□□□□□ -1.2
CACNA1I-204ENST00000407673 BSNQ9UPA5 3926 aa7.51□□□□□ -1.21
CACNA1I-204ENST00000407673 DNAH5Q8TE73 4624 aa7.5□□□□□ -1.21
CACNA1I-204ENST00000407673 DNAH10Q8IVF4 4471 aa7.49□□□□□ -1.21
CACNA1I-204ENST00000407673 DNAH9Q9NYC9 4486 aa7.48□□□□□ -1.21
CACNA1I-204ENST00000407673 KRTAP19-5Q3LI72 72 aa7.47□□□□□ -1.21
CACNA1I-204ENST00000407673 DNAH1Q9P2D7 4330 aa7.47□□□□□ -1.21
CACNA1I-204ENST00000407673 MT2AP02795 61 aa7.46□□□□□ -1.22
CACNA1I-204ENST00000407673 DNAH2Q9P225 4427 aa7.46□□□□□ -1.22
CACNA1I-204ENST00000407673 SPRR2GQ9BYE4 73 aa7.39□□□□□ -1.23
CACNA1I-204ENST00000407673 AKAP9Q99996 3911 aa7.38□□□□□ -1.23
CACNA1I-204ENST00000407673 DNAH11Q96DT5 4516 aa7.37□□□□□ -1.23
CACNA1I-204ENST00000407673 LCE3CQ5T5A8 94 aa7.37□□□□□ -1.23
CACNA1I-204ENST00000407673 SPRR2FQ96RM1 72 aa7.36□□□□□ -1.23
CACNA1I-204ENST00000407673 KRTAP10-7P60409 375 aaPredicted RBP7.36□□□□□ -1.23
CACNA1I-204ENST00000407673 MT1FP04733 61 aa7.32□□□□□ -1.24
CACNA1I-204ENST00000407673 PLECQ15149 4684 aaKnown RBP7.25□□□□□ -1.25
CACNA1I-204ENST00000407673 DNAH8Q96JB1 4490 aa7.24□□□□□ -1.25
CACNA1I-204ENST00000407673 DNAH17Q9UFH2 4485 aa7.19□□□□□ -1.26
CACNA1I-204ENST00000407673 FAT1Q14517 4588 aa7.16□□□□□ -1.26
CACNA1I-204ENST00000407673 DNAH3Q8TD57 4116 aa7.06□□□□□ -1.28
CACNA1I-204ENST00000407673 VPS13DQ5THJ4 4388 aa7.05□□□□□ -1.28
CACNA1I-204ENST00000407673 LCE3BQ5TA77 95 aa7.02□□□□□ -1.29
CACNA1I-204ENST00000407673 SACSQ9NZJ4 4579 aa7.02□□□□□ -1.29
CACNA1I-204ENST00000407673 LRP1BQ9NZR2 4599 aa7□□□□□ -1.29
CACNA1I-204ENST00000407673 DYNC1H1Q14204 4646 aaKnown RBP7□□□□□ -1.29
CACNA1I-204ENST00000407673 FAT2Q9NYQ8 4349 aa6.99□□□□□ -1.29
CACNA1I-204ENST00000407673 ANK2Q01484 3957 aa6.93□□□□□ -1.3
CACNA1I-204ENST00000407673 ZNF469Q96JG9 3925 aaPredicted RBP6.93□□□□□ -1.3
CACNA1I-204ENST00000407673 SPRR2EP22531 72 aa6.9□□□□□ -1.3
CACNA1I-204ENST00000407673 SPRR2BP35325 72 aa6.9□□□□□ -1.3
CACNA1I-204ENST00000407673 SPRR2AP35326 72 aa6.9□□□□□ -1.3
CACNA1I-204ENST00000407673 DYNC2H1Q8NCM8 4307 aaKnown RBP6.9□□□□□ -1.31
CACNA1I-204ENST00000407673 MT1GP13640 62 aa6.86□□□□□ -1.31
CACNA1I-204ENST00000407673 STARD9Q9P2P6 4700 aa6.85□□□□□ -1.31
CACNA1I-204ENST00000407673 KRTAP12-4P60329 112 aa6.84□□□□□ -1.31
CACNA1I-204ENST00000407673 KRTAP19-4Q3LI73 84 aa6.84□□□□□ -1.31
CACNA1I-204ENST00000407673 APOBP04114 4563 aaKnown RBP6.82□□□□□ -1.32
CACNA1I-204ENST00000407673 RYR1P21817 5038 aa6.77□□□□□ -1.33
CACNA1I-204ENST00000407673 KRTAP19-1Q8IUB9 90 aa6.77□□□□□ -1.33
CACNA1I-204ENST00000407673 MT1XP80297 61 aa6.75□□□□□ -1.33
CACNA1I-204ENST00000407673 KRTAP19-8Q3LI54 63 aa6.75□□□□□ -1.33
CACNA1I-204ENST00000407673 VPS13BQ7Z7G8 4022 aa6.74□□□□□ -1.33
CACNA1I-204ENST00000407673 CMYA5Q8N3K9 4069 aa6.68□□□□□ -1.34
CACNA1I-204ENST00000407673 SPRR2DP22532 72 aa6.67□□□□□ -1.34
CACNA1I-204ENST00000407673 PRKDCP78527 4128 aaKnown RBP6.65□□□□□ -1.34
CACNA1I-204ENST00000407673 FRAS1Q86XX4 4008 aa6.65□□□□□ -1.35
CACNA1I-204ENST00000407673 DNAH7Q8WXX0 4024 aa6.63□□□□□ -1.35
CACNA1I-204ENST00000407673 DNHD1Q96M86 4753 aa6.62□□□□□ -1.35
CACNA1I-204ENST00000407673 DNAH6Q9C0G6 4158 aa6.62□□□□□ -1.35
CACNA1I-204ENST00000407673 KRTAP4-8A0A0G2JLE6 195 aa6.62□□□□□ -1.35
CACNA1I-204ENST00000407673 KRTAP4-8Q9BYQ9 185 aa6.62□□□□□ -1.35
CACNA1I-204ENST00000407673 KMT2AQ03164 3969 aa6.61□□□□□ -1.35
CACNA1I-204ENST00000407673 LCE2BO14633 110 aa6.6□□□□□ -1.35
CACNA1I-204ENST00000407673 MT1BP07438 61 aa6.58□□□□□ -1.36
CACNA1I-204ENST00000407673 FAT3Q8TDW7 4589 aa6.55□□□□□ -1.36
CACNA1I-204ENST00000407673 LCE3DQ9BYE3 92 aa6.55□□□□□ -1.36
CACNA1I-204ENST00000407673 LRP1Q07954 4544 aaKnown RBP6.53□□□□□ -1.36
CACNA1I-204ENST00000407673 KRTAP17-1Q9BYP8 105 aa6.48□□□□□ -1.37
CACNA1I-204ENST00000407673 RYR3Q15413 4870 aa6.48□□□□□ -1.37
CACNA1I-204ENST00000407673 SPRR5A0A1B0GTR4 108 aa6.48□□□□□ -1.37
CACNA1I-204ENST00000407673 KRTAP9-8Q9BYQ0 159 aa6.43□□□□□ -1.38
CACNA1I-204ENST00000407673 LCE3EQ5T5B0 92 aa6.43□□□□□ -1.38
CACNA1I-204ENST00000407673 LYSTQ99698 3801 aa6.43□□□□□ -1.38
CACNA1I-204ENST00000407673 MYCBP2O75592 4640 aa6.37□□□□□ -1.39
CACNA1I-204ENST00000407673 KRTAP4-7Q9BYR0 210 aa6.35□□□□□ -1.39
CACNA1I-204ENST00000407673 KRTAP9-3Q9BYQ3 159 aa6.31□□□□□ -1.4
CACNA1I-204ENST00000407673 HERC1Q15751 4861 aa6.28□□□□□ -1.4
CACNA1I-204ENST00000407673 HECTD4Q9Y4D8 3996 aa6.22□□□□□ -1.41
CACNA1I-204ENST00000407673 KRTAP19-3Q7Z4W3 81 aa6.21□□□□□ -1.42
CACNA1I-204ENST00000407673 LCE2CQ5TA81 110 aa6.19□□□□□ -1.42
CACNA1I-204ENST00000407673 MT1LQ93083 61 aa6.17□□□□□ -1.42
CACNA1I-204ENST00000407673 HSPG2P98160 4391 aa6.13□□□□□ -1.43
CACNA1I-204ENST00000407673 PRM1P04553 51 aa6.1□□□□□ -1.43
CACNA1I-204ENST00000407673 PKD1P98161 4303 aa6.1□□□□□ -1.43
CACNA1I-204ENST00000407673 RYR2Q92736 4967 aa6.1□□□□□ -1.43
CACNA1I-204ENST00000407673 LCE2DQ5TA82 110 aaPredicted RBP6.1□□□□□ -1.43
CACNA1I-204ENST00000407673 MT1EP04732 61 aa6.08□□□□□ -1.44
CACNA1I-204ENST00000407673 LPAP08519 4548 aa6.03□□□□□ -1.44
CACNA1I-204ENST00000407673 LOC100996750A0A140TA64 210 aa6.03□□□□□ -1.44
CACNA1I-204ENST00000407673 PKHD1L1Q86WI1 4243 aa6□□□□□ -1.45
CACNA1I-204ENST00000407673 MT4P47944 62 aa5.99□□□□□ -1.45
CACNA1I-204ENST00000407673 MT3P25713 68 aa5.93□□□□□ -1.46
CACNA1I-204ENST00000407673 MT1MQ8N339 61 aa5.93□□□□□ -1.46
CACNA1I-204ENST00000407673 KIAA1109Q2LD37 5005 aa5.92□□□□□ -1.46
CACNA1I-204ENST00000407673 KRTAP4-3Q9BYR4 195 aa5.9□□□□□ -1.46
CACNA1I-204ENST00000407673 LCE1BQ5T7P3 118 aa5.88□□□□□ -1.47
CACNA1I-204ENST00000407673 LRP2P98164 4655 aa5.86□□□□□ -1.47
CACNA1I-204ENST00000407673 HERC2O95714 4834 aa5.85□□□□□ -1.47
CACNA1I-204ENST00000407673 LCE1DQ5T752 114 aa5.82□□□□□ -1.48
CACNA1I-204ENST00000407673 KRTAP19-2Q3LHN2 52 aa5.77□□□□□ -1.49
CACNA1I-204ENST00000407673 HYDINQ4G0P3 5121 aa5.74□□□□□ -1.49
CACNA1I-204ENST00000407673 PKHD1P08F94 4074 aa5.73□□□□□ -1.49
CACNA1I-204ENST00000407673 TNXBP22105 4242 aa5.73□□□□□ -1.49
CACNA1I-204ENST00000407673 KMT2CQ8NEZ4 4911 aaKnown RBP5.72□□□□□ -1.49
CACNA1I-204ENST00000407673 PCLOQ9Y6V0 5065 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms