RNA–Protein interactions for RNA: ENST00000406854.5

PCNX4-203, Transcript of pecanex 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PCNX4, Length 4,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-203ENST00000406854 DNAH11Q96DT5 4516 aa6.32□□□□□ -1.4
PCNX4-203ENST00000406854 INE1O15225 51 aa6.29□□□□□ -1.4
PCNX4-203ENST00000406854 KRTAP23-1A1A580 65 aa6.28□□□□□ -1.4
PCNX4-203ENST00000406854 PLECQ15149 4684 aaKnown RBP6.27□□□□□ -1.4
PCNX4-203ENST00000406854 DNAH1Q9P2D7 4330 aa6.25□□□□□ -1.41
PCNX4-203ENST00000406854 KRTAP12-3P60328 96 aa6.24□□□□□ -1.41
PCNX4-203ENST00000406854 DNAH10Q8IVF4 4471 aa6.23□□□□□ -1.41
PCNX4-203ENST00000406854 LCE3AQ5TA76 89 aa6.19□□□□□ -1.42
PCNX4-203ENST00000406854 DNHD1Q96M86 4753 aa6.18□□□□□ -1.42
PCNX4-203ENST00000406854 FAT1Q14517 4588 aa6.16□□□□□ -1.42
PCNX4-203ENST00000406854 DNAH8Q96JB1 4490 aa6.12□□□□□ -1.43
PCNX4-203ENST00000406854 ALMS1Q8TCU4 4167 aa6.1□□□□□ -1.43
PCNX4-203ENST00000406854 DNAH17Q9UFH2 4485 aa6.09□□□□□ -1.43
PCNX4-203ENST00000406854 VPS13DQ5THJ4 4388 aa6.08□□□□□ -1.44
PCNX4-203ENST00000406854 DYNC1H1Q14204 4646 aaKnown RBP6.05□□□□□ -1.44
PCNX4-203ENST00000406854 KRTAP4-1Q9BYQ7 146 aa6.04□□□□□ -1.44
PCNX4-203ENST00000406854 DNAH2Q9P225 4427 aa6.04□□□□□ -1.44
PCNX4-203ENST00000406854 CRCT1Q9UGL9 99 aa6.02□□□□□ -1.45
PCNX4-203ENST00000406854 LRP1BQ9NZR2 4599 aa6□□□□□ -1.45
PCNX4-203ENST00000406854 STARD9Q9P2P6 4700 aa5.97□□□□□ -1.45
PCNX4-203ENST00000406854 RYR1P21817 5038 aa5.96□□□□□ -1.46
PCNX4-203ENST00000406854 SACSQ9NZJ4 4579 aa5.92□□□□□ -1.46
PCNX4-203ENST00000406854 MYCBP2O75592 4640 aa5.86□□□□□ -1.47
PCNX4-203ENST00000406854 SPRR2GQ9BYE4 73 aa5.83□□□□□ -1.48
PCNX4-203ENST00000406854 APOBP04114 4563 aaKnown RBP5.81□□□□□ -1.48
PCNX4-203ENST00000406854 MT1HP80294 61 aa5.79□□□□□ -1.48
PCNX4-203ENST00000406854 DYNC2H1Q8NCM8 4307 aaKnown RBP5.79□□□□□ -1.48
PCNX4-203ENST00000406854 MT2AP02795 61 aa5.78□□□□□ -1.48
PCNX4-203ENST00000406854 PRKDCP78527 4128 aaKnown RBP5.77□□□□□ -1.49
PCNX4-203ENST00000406854 ANK2Q01484 3957 aa5.76□□□□□ -1.49
PCNX4-203ENST00000406854 KIAA1109Q2LD37 5005 aa5.75□□□□□ -1.49
PCNX4-203ENST00000406854 LYSTQ99698 3801 aa5.75□□□□□ -1.49
PCNX4-203ENST00000406854 FAT2Q9NYQ8 4349 aa5.74□□□□□ -1.49
PCNX4-203ENST00000406854 DNAH3Q8TD57 4116 aa5.74□□□□□ -1.49
PCNX4-203ENST00000406854 KMT2AQ03164 3969 aa5.72□□□□□ -1.49
PCNX4-203ENST00000406854 VPS13BQ7Z7G8 4022 aa5.71□□□□□ -1.5
PCNX4-203ENST00000406854 KRTAP8-1Q8IUC2 63 aa5.7□□□□□ -1.5
PCNX4-203ENST00000406854 KRTAP10-5P60370 271 aa5.69□□□□□ -1.5
PCNX4-203ENST00000406854 MT1FP04733 61 aa5.68□□□□□ -1.5
PCNX4-203ENST00000406854 LRP1Q07954 4544 aaKnown RBP5.59□□□□□ -1.51
PCNX4-203ENST00000406854 FAT3Q8TDW7 4589 aa5.59□□□□□ -1.51
PCNX4-203ENST00000406854 RYR3Q15413 4870 aa5.59□□□□□ -1.51
PCNX4-203ENST00000406854 KRTAP19-5Q3LI72 72 aa5.54□□□□□ -1.52
PCNX4-203ENST00000406854 KRTAP17-1Q9BYP8 105 aa5.51□□□□□ -1.53
PCNX4-203ENST00000406854 KRTAP19-1Q8IUB9 90 aa5.51□□□□□ -1.53
PCNX4-203ENST00000406854 FRAS1Q86XX4 4008 aa5.49□□□□□ -1.53
PCNX4-203ENST00000406854 LCE3CQ5T5A8 94 aa5.48□□□□□ -1.53
PCNX4-203ENST00000406854 CMYA5Q8N3K9 4069 aa5.48□□□□□ -1.53
PCNX4-203ENST00000406854 DNAH6Q9C0G6 4158 aa5.45□□□□□ -1.54
PCNX4-203ENST00000406854 KRTAP19-8Q3LI54 63 aa5.42□□□□□ -1.54
PCNX4-203ENST00000406854 RYR2Q92736 4967 aa5.42□□□□□ -1.54
PCNX4-203ENST00000406854 LRP2P98164 4655 aa5.42□□□□□ -1.54
PCNX4-203ENST00000406854 HECTD4Q9Y4D8 3996 aa5.41□□□□□ -1.54
PCNX4-203ENST00000406854 KRTAP10-7P60409 375 aaPredicted RBP5.37□□□□□ -1.55
PCNX4-203ENST00000406854 KRTAP19-4Q3LI73 84 aa5.34□□□□□ -1.56
PCNX4-203ENST00000406854 HERC2O95714 4834 aa5.32□□□□□ -1.56
PCNX4-203ENST00000406854 DNAH7Q8WXX0 4024 aa5.3□□□□□ -1.56
PCNX4-203ENST00000406854 MT1XP80297 61 aa5.3□□□□□ -1.56
PCNX4-203ENST00000406854 SPRR2FQ96RM1 72 aa5.29□□□□□ -1.56
PCNX4-203ENST00000406854 SPRR5A0A1B0GTR4 108 aa5.26□□□□□ -1.57
PCNX4-203ENST00000406854 MT1BP07438 61 aa5.26□□□□□ -1.57
PCNX4-203ENST00000406854 KRTAP9-8Q9BYQ0 159 aa5.22□□□□□ -1.57
PCNX4-203ENST00000406854 HYDINQ4G0P3 5121 aa5.21□□□□□ -1.58
PCNX4-203ENST00000406854 PKHD1P08F94 4074 aa5.18□□□□□ -1.58
PCNX4-203ENST00000406854 LCE2CQ5TA81 110 aa5.17□□□□□ -1.58
PCNX4-203ENST00000406854 PKD1P98161 4303 aa5.17□□□□□ -1.58
PCNX4-203ENST00000406854 PCLOQ9Y6V0 5065 aa5.13□□□□□ -1.59
PCNX4-203ENST00000406854 HSPG2P98160 4391 aa5.1□□□□□ -1.59
PCNX4-203ENST00000406854 KMT2CQ8NEZ4 4911 aaKnown RBP5.09□□□□□ -1.59
PCNX4-203ENST00000406854 KRTAP4-8A0A0G2JLE6 195 aa5.08□□□□□ -1.6
PCNX4-203ENST00000406854 KRTAP4-8Q9BYQ9 185 aa5.08□□□□□ -1.6
PCNX4-203ENST00000406854 KRTAP9-3Q9BYQ3 159 aa5.07□□□□□ -1.6
PCNX4-203ENST00000406854 HERC1Q15751 4861 aa5.04□□□□□ -1.6
PCNX4-203ENST00000406854 LPAP08519 4548 aa5.02□□□□□ -1.61
PCNX4-203ENST00000406854 KRTAP12-4P60329 112 aa5□□□□□ -1.61
PCNX4-203ENST00000406854 KRTAP19-2Q3LHN2 52 aa5□□□□□ -1.61
PCNX4-203ENST00000406854 MT1GP13640 62 aa5□□□□□ -1.61
PCNX4-203ENST00000406854 SYNE1Q8NF91 8797 aaKnown RBP5□□□□□ -1.61
PCNX4-203ENST00000406854 MUC17Q685J3 4493 aa4.99□□□□□ -1.61
PCNX4-203ENST00000406854 LCE3BQ5TA77 95 aa4.98□□□□□ -1.61
PCNX4-203ENST00000406854 BIRC6Q9NR09 4857 aa4.97□□□□□ -1.61
PCNX4-203ENST00000406854 EPPK1P58107 5090 aaKnown RBP4.9□□□□□ -1.63
PCNX4-203ENST00000406854 ABCA13Q86UQ4 5058 aa4.87□□□□□ -1.63
PCNX4-203ENST00000406854 FLGP20930 4061 aaPredicted RBP4.85□□□□□ -1.63
PCNX4-203ENST00000406854 SPRR2EP22531 72 aa4.84□□□□□ -1.63
PCNX4-203ENST00000406854 SPRR2BP35325 72 aa4.84□□□□□ -1.63
PCNX4-203ENST00000406854 SPRR2AP35326 72 aa4.84□□□□□ -1.63
PCNX4-203ENST00000406854 LCE2BO14633 110 aa4.83□□□□□ -1.64
PCNX4-203ENST00000406854 KRTAP4-7Q9BYR0 210 aa4.83□□□□□ -1.64
PCNX4-203ENST00000406854 TNXBP22105 4242 aa4.79□□□□□ -1.64
PCNX4-203ENST00000406854 MT1LQ93083 61 aa4.79□□□□□ -1.64
PCNX4-203ENST00000406854 UBR4Q5T4S7 5183 aa4.78□□□□□ -1.64
PCNX4-203ENST00000406854 LCE3DQ9BYE3 92 aa4.76□□□□□ -1.65
PCNX4-203ENST00000406854 PKHD1L1Q86WI1 4243 aa4.76□□□□□ -1.65
PCNX4-203ENST00000406854 MT1EP04732 61 aa4.74□□□□□ -1.65
PCNX4-203ENST00000406854 KRTAP19-3Q7Z4W3 81 aa4.74□□□□□ -1.65
PCNX4-203ENST00000406854 LCE3EQ5T5B0 92 aa4.7□□□□□ -1.66
PCNX4-203ENST00000406854 SPRR2DP22532 72 aa4.66□□□□□ -1.66
PCNX4-203ENST00000406854 FSIP2Q5CZC0 6907 aa4.63□□□□□ -1.67
PCNX4-203ENST00000406854 FAT4Q6V0I7 4981 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms