RNA–Protein interactions for RNA: ENST00000399352.5

ITSN1-209, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 5,408 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-209ENST00000399352 AKAP9Q99996 3911 aa6.73□□□□□ -1.33
ITSN1-209ENST00000399352 KRTAP4-5Q9BYR2 181 aa6.69□□□□□ -1.34
ITSN1-209ENST00000399352 HUWE1Q7Z6Z7 4374 aaKnown RBP6.49□□□□□ -1.37
ITSN1-209ENST00000399352 CSMD3Q7Z407 3707 aa6.48□□□□□ -1.37
ITSN1-209ENST00000399352 KRTAP8-1Q8IUC2 63 aa6.46□□□□□ -1.38
ITSN1-209ENST00000399352 KRTAP4-1Q9BYQ7 146 aa6.28□□□□□ -1.4
ITSN1-209ENST00000399352 ANK2Q01484 3957 aa6.26□□□□□ -1.41
ITSN1-209ENST00000399352 DNAH5Q8TE73 4624 aa6.26□□□□□ -1.41
ITSN1-209ENST00000399352 FAT1Q14517 4588 aa6.26□□□□□ -1.41
ITSN1-209ENST00000399352 DNAH10Q8IVF4 4471 aa6.21□□□□□ -1.42
ITSN1-209ENST00000399352 CMYA5Q8N3K9 4069 aa6.18□□□□□ -1.42
ITSN1-209ENST00000399352 KRTAP19-5Q3LI72 72 aa6.16□□□□□ -1.42
ITSN1-209ENST00000399352 PLECQ15149 4684 aaKnown RBP6.16□□□□□ -1.42
ITSN1-209ENST00000399352 SPRR2GQ9BYE4 73 aa6.14□□□□□ -1.43
ITSN1-209ENST00000399352 DNAH11Q96DT5 4516 aa6.14□□□□□ -1.43
ITSN1-209ENST00000399352 DNAH3Q8TD57 4116 aa6.14□□□□□ -1.43
ITSN1-209ENST00000399352 MT2AP02795 61 aa6.14□□□□□ -1.43
ITSN1-209ENST00000399352 MT1HP80294 61 aa6.14□□□□□ -1.43
ITSN1-209ENST00000399352 ALMS1Q8TCU4 4167 aa6.13□□□□□ -1.43
ITSN1-209ENST00000399352 LCE3CQ5T5A8 94 aa6.12□□□□□ -1.43
ITSN1-209ENST00000399352 DNAH8Q96JB1 4490 aa6.06□□□□□ -1.44
ITSN1-209ENST00000399352 DNAH1Q9P2D7 4330 aa6.06□□□□□ -1.44
ITSN1-209ENST00000399352 DNAH2Q9P225 4427 aa6.03□□□□□ -1.44
ITSN1-209ENST00000399352 MT1FP04733 61 aa6.02□□□□□ -1.45
ITSN1-209ENST00000399352 DNAH9Q9NYC9 4486 aa6.02□□□□□ -1.45
ITSN1-209ENST00000399352 KRTAP10-7P60409 375 aaPredicted RBP5.99□□□□□ -1.45
ITSN1-209ENST00000399352 SPRR2FQ96RM1 72 aa5.96□□□□□ -1.45
ITSN1-209ENST00000399352 LYSTQ99698 3801 aa5.9□□□□□ -1.46
ITSN1-209ENST00000399352 DNAH17Q9UFH2 4485 aa5.87□□□□□ -1.47
ITSN1-209ENST00000399352 DNAH7Q8WXX0 4024 aa5.82□□□□□ -1.48
ITSN1-209ENST00000399352 DYNC1H1Q14204 4646 aaKnown RBP5.81□□□□□ -1.48
ITSN1-209ENST00000399352 DYNC2H1Q8NCM8 4307 aaKnown RBP5.81□□□□□ -1.48
ITSN1-209ENST00000399352 RYR1P21817 5038 aa5.79□□□□□ -1.48
ITSN1-209ENST00000399352 DNHD1Q96M86 4753 aa5.79□□□□□ -1.48
ITSN1-209ENST00000399352 SACSQ9NZJ4 4579 aa5.79□□□□□ -1.48
ITSN1-209ENST00000399352 LCE3BQ5TA77 95 aa5.79□□□□□ -1.48
ITSN1-209ENST00000399352 KRTAP12-4P60329 112 aa5.78□□□□□ -1.48
ITSN1-209ENST00000399352 PRKDCP78527 4128 aaKnown RBP5.78□□□□□ -1.48
ITSN1-209ENST00000399352 LRP1BQ9NZR2 4599 aa5.76□□□□□ -1.49
ITSN1-209ENST00000399352 VPS13DQ5THJ4 4388 aa5.73□□□□□ -1.49
ITSN1-209ENST00000399352 APOBP04114 4563 aaKnown RBP5.72□□□□□ -1.49
ITSN1-209ENST00000399352 STARD9Q9P2P6 4700 aa5.72□□□□□ -1.49
ITSN1-209ENST00000399352 KRTAP19-4Q3LI73 84 aa5.72□□□□□ -1.49
ITSN1-209ENST00000399352 KRTAP19-1Q8IUB9 90 aa5.69□□□□□ -1.5
ITSN1-209ENST00000399352 MT1GP13640 62 aa5.65□□□□□ -1.51
ITSN1-209ENST00000399352 FAT3Q8TDW7 4589 aa5.62□□□□□ -1.51
ITSN1-209ENST00000399352 KMT2AQ03164 3969 aa5.62□□□□□ -1.51
ITSN1-209ENST00000399352 KRTAP19-8Q3LI54 63 aa5.61□□□□□ -1.51
ITSN1-209ENST00000399352 MYCBP2O75592 4640 aa5.61□□□□□ -1.51
ITSN1-209ENST00000399352 SPRR5A0A1B0GTR4 108 aa5.6□□□□□ -1.51
ITSN1-209ENST00000399352 MT1XP80297 61 aa5.6□□□□□ -1.51
ITSN1-209ENST00000399352 HECTD4Q9Y4D8 3996 aa5.6□□□□□ -1.51
ITSN1-209ENST00000399352 FAT2Q9NYQ8 4349 aa5.58□□□□□ -1.52
ITSN1-209ENST00000399352 VPS13BQ7Z7G8 4022 aa5.54□□□□□ -1.52
ITSN1-209ENST00000399352 SPRR2EP22531 72 aa5.49□□□□□ -1.53
ITSN1-209ENST00000399352 SPRR2BP35325 72 aa5.49□□□□□ -1.53
ITSN1-209ENST00000399352 SPRR2AP35326 72 aa5.49□□□□□ -1.53
ITSN1-209ENST00000399352 LRP1Q07954 4544 aaKnown RBP5.49□□□□□ -1.53
ITSN1-209ENST00000399352 KRTAP4-8A0A0G2JLE6 195 aa5.49□□□□□ -1.53
ITSN1-209ENST00000399352 KRTAP4-8Q9BYQ9 185 aa5.49□□□□□ -1.53
ITSN1-209ENST00000399352 MT1BP07438 61 aa5.47□□□□□ -1.53
ITSN1-209ENST00000399352 LCE3DQ9BYE3 92 aa5.46□□□□□ -1.53
ITSN1-209ENST00000399352 DNAH6Q9C0G6 4158 aa5.46□□□□□ -1.53
ITSN1-209ENST00000399352 FRAS1Q86XX4 4008 aa5.46□□□□□ -1.54
ITSN1-209ENST00000399352 HYDINQ4G0P3 5121 aa5.45□□□□□ -1.54
ITSN1-209ENST00000399352 PKD1P98161 4303 aa5.42□□□□□ -1.54
ITSN1-209ENST00000399352 LCE3EQ5T5B0 92 aa5.39□□□□□ -1.55
ITSN1-209ENST00000399352 RYR3Q15413 4870 aa5.38□□□□□ -1.55
ITSN1-209ENST00000399352 PKHD1P08F94 4074 aa5.32□□□□□ -1.56
ITSN1-209ENST00000399352 KRTAP17-1Q9BYP8 105 aa5.31□□□□□ -1.56
ITSN1-209ENST00000399352 KRTAP9-8Q9BYQ0 159 aa5.31□□□□□ -1.56
ITSN1-209ENST00000399352 LCE2BO14633 110 aa5.3□□□□□ -1.56
ITSN1-209ENST00000399352 KRTAP4-7Q9BYR0 210 aa5.3□□□□□ -1.56
ITSN1-209ENST00000399352 SPRR2DP22532 72 aa5.29□□□□□ -1.56
ITSN1-209ENST00000399352 KIAA1109Q2LD37 5005 aa5.25□□□□□ -1.57
ITSN1-209ENST00000399352 KMT2CQ8NEZ4 4911 aaKnown RBP5.24□□□□□ -1.57
ITSN1-209ENST00000399352 KRTAP9-3Q9BYQ3 159 aa5.18□□□□□ -1.58
ITSN1-209ENST00000399352 RYR2Q92736 4967 aa5.18□□□□□ -1.58
ITSN1-209ENST00000399352 MT1LQ93083 61 aa5.13□□□□□ -1.59
ITSN1-209ENST00000399352 LCE2CQ5TA81 110 aa5.12□□□□□ -1.59
ITSN1-209ENST00000399352 SYNE1Q8NF91 8797 aaKnown RBP5.12□□□□□ -1.59
ITSN1-209ENST00000399352 PRM1P04553 51 aa5.11□□□□□ -1.59
ITSN1-209ENST00000399352 KRTAP19-3Q7Z4W3 81 aa5.11□□□□□ -1.59
ITSN1-209ENST00000399352 LRP2P98164 4655 aa5.1□□□□□ -1.59
ITSN1-209ENST00000399352 MT1EP04732 61 aa5.04□□□□□ -1.6
ITSN1-209ENST00000399352 PKHD1L1Q86WI1 4243 aa5.01□□□□□ -1.61
ITSN1-209ENST00000399352 HERC1Q15751 4861 aa5.01□□□□□ -1.61
ITSN1-209ENST00000399352 LOC100996750A0A140TA64 210 aa4.98□□□□□ -1.61
ITSN1-209ENST00000399352 HERC2O95714 4834 aa4.94□□□□□ -1.62
ITSN1-209ENST00000399352 PCLOQ9Y6V0 5065 aa4.94□□□□□ -1.62
ITSN1-209ENST00000399352 HSPG2P98160 4391 aa4.93□□□□□ -1.62
ITSN1-209ENST00000399352 MT1MQ8N339 61 aa4.9□□□□□ -1.62
ITSN1-209ENST00000399352 MT3P25713 68 aa4.89□□□□□ -1.63
ITSN1-209ENST00000399352 KRTAP4-3Q9BYR4 195 aa4.89□□□□□ -1.63
ITSN1-209ENST00000399352 TNXBP22105 4242 aa4.89□□□□□ -1.63
ITSN1-209ENST00000399352 LPAP08519 4548 aa4.88□□□□□ -1.63
ITSN1-209ENST00000399352 LCE2DQ5TA82 110 aaPredicted RBP4.88□□□□□ -1.63
ITSN1-209ENST00000399352 EPPK1P58107 5090 aaKnown RBP4.86□□□□□ -1.63
ITSN1-209ENST00000399352 KRTAP19-2Q3LHN2 52 aa4.81□□□□□ -1.64
ITSN1-209ENST00000399352 LCE1BQ5T7P3 118 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms