RNA–Protein interactions for RNA: ENST00000398706.6

ZSWIM8-201, Transcript of zinc finger SWIM-type containing 8, humanhuman

TSL 2 BASIC

Gene ZSWIM8, Length 6,062 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZSWIM8-201ENST00000398706 VPS13CQ709C8 3753 aa6.12□□□□□ -1.43
ZSWIM8-201ENST00000398706 HUWE1Q7Z6Z7 4374 aaKnown RBP6.07□□□□□ -1.44
ZSWIM8-201ENST00000398706 ZNF469Q96JG9 3925 aaPredicted RBP6.03□□□□□ -1.44
ZSWIM8-201ENST00000398706 COL7A1Q02388 2944 aa6.02□□□□□ -1.45
ZSWIM8-201ENST00000398706 KRTAP10-4P60372 401 aaPredicted RBP6.01□□□□□ -1.45
ZSWIM8-201ENST00000398706 KRTAP19-5Q3LI72 72 aa6.01□□□□□ -1.45
ZSWIM8-201ENST00000398706 CSMD3Q7Z407 3707 aa5.98□□□□□ -1.45
ZSWIM8-201ENST00000398706 AKAP9Q99996 3911 aa5.95□□□□□ -1.46
ZSWIM8-201ENST00000398706 LCE3BQ5TA77 95 aa5.93□□□□□ -1.46
ZSWIM8-201ENST00000398706 ALMS1Q8TCU4 4167 aa5.91□□□□□ -1.46
ZSWIM8-201ENST00000398706 SPRR2EP22531 72 aa5.9□□□□□ -1.47
ZSWIM8-201ENST00000398706 SPRR2BP35325 72 aa5.9□□□□□ -1.47
ZSWIM8-201ENST00000398706 SPRR2AP35326 72 aa5.9□□□□□ -1.47
ZSWIM8-201ENST00000398706 LCE3CQ5T5A8 94 aa5.89□□□□□ -1.47
ZSWIM8-201ENST00000398706 DNAH9Q9NYC9 4486 aa5.87□□□□□ -1.47
ZSWIM8-201ENST00000398706 MT1HP80294 61 aa5.86□□□□□ -1.47
ZSWIM8-201ENST00000398706 MT2AP02795 61 aa5.74□□□□□ -1.49
ZSWIM8-201ENST00000398706 PLECQ15149 4684 aaKnown RBP5.72□□□□□ -1.49
ZSWIM8-201ENST00000398706 KRTAP4-1Q9BYQ7 146 aa5.71□□□□□ -1.5
ZSWIM8-201ENST00000398706 SPRR2DP22532 72 aa5.7□□□□□ -1.5
ZSWIM8-201ENST00000398706 DNAH1Q9P2D7 4330 aa5.69□□□□□ -1.5
ZSWIM8-201ENST00000398706 DNAH5Q8TE73 4624 aa5.66□□□□□ -1.5
ZSWIM8-201ENST00000398706 VPS13DQ5THJ4 4388 aa5.65□□□□□ -1.5
ZSWIM8-201ENST00000398706 MT1GP13640 62 aa5.64□□□□□ -1.51
ZSWIM8-201ENST00000398706 KRTAP12-4P60329 112 aa5.64□□□□□ -1.51
ZSWIM8-201ENST00000398706 MT1FP04733 61 aa5.62□□□□□ -1.51
ZSWIM8-201ENST00000398706 DNAH17Q9UFH2 4485 aa5.61□□□□□ -1.51
ZSWIM8-201ENST00000398706 DNAH11Q96DT5 4516 aa5.6□□□□□ -1.51
ZSWIM8-201ENST00000398706 DNHD1Q96M86 4753 aa5.59□□□□□ -1.51
ZSWIM8-201ENST00000398706 SPRR2GQ9BYE4 73 aa5.56□□□□□ -1.52
ZSWIM8-201ENST00000398706 DNAH10Q8IVF4 4471 aa5.56□□□□□ -1.52
ZSWIM8-201ENST00000398706 LCE2BO14633 110 aa5.54□□□□□ -1.52
ZSWIM8-201ENST00000398706 STARD9Q9P2P6 4700 aa5.53□□□□□ -1.52
ZSWIM8-201ENST00000398706 DYNC1H1Q14204 4646 aaKnown RBP5.47□□□□□ -1.53
ZSWIM8-201ENST00000398706 DNAH2Q9P225 4427 aa5.46□□□□□ -1.54
ZSWIM8-201ENST00000398706 ANK2Q01484 3957 aa5.45□□□□□ -1.54
ZSWIM8-201ENST00000398706 DNAH3Q8TD57 4116 aa5.44□□□□□ -1.54
ZSWIM8-201ENST00000398706 LCE3DQ9BYE3 92 aa5.42□□□□□ -1.54
ZSWIM8-201ENST00000398706 PRKDCP78527 4128 aaKnown RBP5.42□□□□□ -1.54
ZSWIM8-201ENST00000398706 LRP1BQ9NZR2 4599 aa5.41□□□□□ -1.54
ZSWIM8-201ENST00000398706 DYNC2H1Q8NCM8 4307 aaKnown RBP5.37□□□□□ -1.55
ZSWIM8-201ENST00000398706 FAT1Q14517 4588 aa5.37□□□□□ -1.55
ZSWIM8-201ENST00000398706 DNAH8Q96JB1 4490 aa5.37□□□□□ -1.55
ZSWIM8-201ENST00000398706 LCE3EQ5T5B0 92 aa5.35□□□□□ -1.55
ZSWIM8-201ENST00000398706 SACSQ9NZJ4 4579 aa5.32□□□□□ -1.56
ZSWIM8-201ENST00000398706 LCE2CQ5TA81 110 aa5.3□□□□□ -1.56
ZSWIM8-201ENST00000398706 FAT2Q9NYQ8 4349 aa5.28□□□□□ -1.56
ZSWIM8-201ENST00000398706 KMT2AQ03164 3969 aa5.27□□□□□ -1.57
ZSWIM8-201ENST00000398706 CMYA5Q8N3K9 4069 aa5.26□□□□□ -1.57
ZSWIM8-201ENST00000398706 LCE2DQ5TA82 110 aaPredicted RBP5.25□□□□□ -1.57
ZSWIM8-201ENST00000398706 RYR1P21817 5038 aa5.23□□□□□ -1.57
ZSWIM8-201ENST00000398706 KRTAP19-4Q3LI73 84 aa5.21□□□□□ -1.58
ZSWIM8-201ENST00000398706 SPRR5A0A1B0GTR4 108 aa5.21□□□□□ -1.58
ZSWIM8-201ENST00000398706 MT4P47944 62 aa5.19□□□□□ -1.58
ZSWIM8-201ENST00000398706 DNAH6Q9C0G6 4158 aa5.18□□□□□ -1.58
ZSWIM8-201ENST00000398706 KRTAP4-8A0A0G2JLE6 195 aa5.18□□□□□ -1.58
ZSWIM8-201ENST00000398706 KRTAP4-8Q9BYQ9 185 aa5.18□□□□□ -1.58
ZSWIM8-201ENST00000398706 VPS13BQ7Z7G8 4022 aa5.17□□□□□ -1.58
ZSWIM8-201ENST00000398706 LCE1BQ5T7P3 118 aa5.16□□□□□ -1.58
ZSWIM8-201ENST00000398706 KIAA1109Q2LD37 5005 aa5.14□□□□□ -1.59
ZSWIM8-201ENST00000398706 APOBP04114 4563 aaKnown RBP5.13□□□□□ -1.59
ZSWIM8-201ENST00000398706 HECTD4Q9Y4D8 3996 aa5.11□□□□□ -1.59
ZSWIM8-201ENST00000398706 LYSTQ99698 3801 aa5.1□□□□□ -1.59
ZSWIM8-201ENST00000398706 DNAH7Q8WXX0 4024 aa5.1□□□□□ -1.59
ZSWIM8-201ENST00000398706 PRM1P04553 51 aa5.09□□□□□ -1.59
ZSWIM8-201ENST00000398706 MT1XP80297 61 aa5.08□□□□□ -1.6
ZSWIM8-201ENST00000398706 FRAS1Q86XX4 4008 aa5.08□□□□□ -1.6
ZSWIM8-201ENST00000398706 RYR3Q15413 4870 aa5.06□□□□□ -1.6
ZSWIM8-201ENST00000398706 LCE1DQ5T752 114 aa5.05□□□□□ -1.6
ZSWIM8-201ENST00000398706 KRTAP17-1Q9BYP8 105 aa5.04□□□□□ -1.6
ZSWIM8-201ENST00000398706 RYR2Q92736 4967 aa5.04□□□□□ -1.6
ZSWIM8-201ENST00000398706 KRTAP19-1Q8IUB9 90 aa5.03□□□□□ -1.6
ZSWIM8-201ENST00000398706 MYCBP2O75592 4640 aa5.02□□□□□ -1.61
ZSWIM8-201ENST00000398706 KRTAP4-7Q9BYR0 210 aa4.99□□□□□ -1.61
ZSWIM8-201ENST00000398706 LRP1Q07954 4544 aaKnown RBP4.97□□□□□ -1.61
ZSWIM8-201ENST00000398706 KRTAP19-8Q3LI54 63 aa4.97□□□□□ -1.61
ZSWIM8-201ENST00000398706 HYDINQ4G0P3 5121 aa4.96□□□□□ -1.62
ZSWIM8-201ENST00000398706 FAT3Q8TDW7 4589 aa4.93□□□□□ -1.62
ZSWIM8-201ENST00000398706 MT1BP07438 61 aa4.88□□□□□ -1.63
ZSWIM8-201ENST00000398706 KRTAP19-3Q7Z4W3 81 aa4.86□□□□□ -1.63
ZSWIM8-201ENST00000398706 MT3P25713 68 aa4.85□□□□□ -1.63
ZSWIM8-201ENST00000398706 LCE5AQ5TCM9 118 aa4.85□□□□□ -1.63
ZSWIM8-201ENST00000398706 PKHD1P08F94 4074 aa4.83□□□□□ -1.64
ZSWIM8-201ENST00000398706 HERC2O95714 4834 aa4.8□□□□□ -1.64
ZSWIM8-201ENST00000398706 LOC100996750A0A140TA64 210 aa4.8□□□□□ -1.64
ZSWIM8-201ENST00000398706 PKD1P98161 4303 aa4.79□□□□□ -1.64
ZSWIM8-201ENST00000398706 HSPG2P98160 4391 aa4.79□□□□□ -1.64
ZSWIM8-201ENST00000398706 LRP2P98164 4655 aa4.73□□□□□ -1.65
ZSWIM8-201ENST00000398706 BIRC6Q9NR09 4857 aa4.73□□□□□ -1.65
ZSWIM8-201ENST00000398706 MT1LQ93083 61 aa4.72□□□□□ -1.65
ZSWIM8-201ENST00000398706 KRTAP9-8Q9BYQ0 159 aa4.71□□□□□ -1.66
ZSWIM8-201ENST00000398706 KMT2CQ8NEZ4 4911 aaKnown RBP4.67□□□□□ -1.66
ZSWIM8-201ENST00000398706 KRTAP4-3Q9BYR4 195 aa4.65□□□□□ -1.66
ZSWIM8-201ENST00000398706 KRTAP9-3Q9BYQ3 159 aa4.64□□□□□ -1.67
ZSWIM8-201ENST00000398706 LCE1CQ5T751 118 aa4.64□□□□□ -1.67
ZSWIM8-201ENST00000398706 LCE1EQ5T753 118 aa4.64□□□□□ -1.67
ZSWIM8-201ENST00000398706 LCE1FQ5T754 118 aa4.64□□□□□ -1.67
ZSWIM8-201ENST00000398706 LCE1AQ5T7P2 110 aa4.64□□□□□ -1.67
ZSWIM8-201ENST00000398706 PKHD1L1Q86WI1 4243 aa4.64□□□□□ -1.67
ZSWIM8-201ENST00000398706 MT1EP04732 61 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 111.4 ms