RNA–Protein interactions for RNA: ENST00000396123.2

GREB1-206, Transcript of growth regulating estrogen receptor binding 1, humanhuman

TSL 1 (best) BASIC

Gene GREB1, Length 5,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GREB1-206ENST00000396123 LORP23490 312 aaPredicted RBP5.66□□□□□ -1.5
GREB1-206ENST00000396123 KRTAP23-1A1A580 65 aa5.63□□□□□ -1.51
GREB1-206ENST00000396123 DNAH1Q9P2D7 4330 aa5.63□□□□□ -1.51
GREB1-206ENST00000396123 PLECQ15149 4684 aaKnown RBP5.62□□□□□ -1.51
GREB1-206ENST00000396123 DNAH11Q96DT5 4516 aa5.59□□□□□ -1.51
GREB1-206ENST00000396123 KRTAP12-3P60328 96 aa5.58□□□□□ -1.52
GREB1-206ENST00000396123 DNAH10Q8IVF4 4471 aa5.56□□□□□ -1.52
GREB1-206ENST00000396123 INE1O15225 51 aa5.56□□□□□ -1.52
GREB1-206ENST00000396123 LCE3AQ5TA76 89 aa5.54□□□□□ -1.52
GREB1-206ENST00000396123 CRCT1Q9UGL9 99 aa5.54□□□□□ -1.52
GREB1-206ENST00000396123 VPS13DQ5THJ4 4388 aa5.51□□□□□ -1.53
GREB1-206ENST00000396123 DNAH17Q9UFH2 4485 aa5.51□□□□□ -1.53
GREB1-206ENST00000396123 DNHD1Q96M86 4753 aa5.47□□□□□ -1.53
GREB1-206ENST00000396123 KRTAP4-1Q9BYQ7 146 aa5.45□□□□□ -1.54
GREB1-206ENST00000396123 DYNC1H1Q14204 4646 aaKnown RBP5.42□□□□□ -1.54
GREB1-206ENST00000396123 DNAH2Q9P225 4427 aa5.39□□□□□ -1.55
GREB1-206ENST00000396123 STARD9Q9P2P6 4700 aa5.38□□□□□ -1.55
GREB1-206ENST00000396123 LRP1BQ9NZR2 4599 aa5.37□□□□□ -1.55
GREB1-206ENST00000396123 FAT1Q14517 4588 aa5.37□□□□□ -1.55
GREB1-206ENST00000396123 KRTAP8-1Q8IUC2 63 aa5.31□□□□□ -1.56
GREB1-206ENST00000396123 DNAH8Q96JB1 4490 aa5.3□□□□□ -1.56
GREB1-206ENST00000396123 DNAH3Q8TD57 4116 aa5.3□□□□□ -1.56
GREB1-206ENST00000396123 SACSQ9NZJ4 4579 aa5.29□□□□□ -1.56
GREB1-206ENST00000396123 MT1HP80294 61 aa5.28□□□□□ -1.56
GREB1-206ENST00000396123 DYNC2H1Q8NCM8 4307 aaKnown RBP5.27□□□□□ -1.57
GREB1-206ENST00000396123 RYR1P21817 5038 aa5.26□□□□□ -1.57
GREB1-206ENST00000396123 SPRR2GQ9BYE4 73 aa5.26□□□□□ -1.57
GREB1-206ENST00000396123 FAT2Q9NYQ8 4349 aa5.24□□□□□ -1.57
GREB1-206ENST00000396123 MT2AP02795 61 aa5.24□□□□□ -1.57
GREB1-206ENST00000396123 PRKDCP78527 4128 aaKnown RBP5.19□□□□□ -1.58
GREB1-206ENST00000396123 ANK2Q01484 3957 aa5.18□□□□□ -1.58
GREB1-206ENST00000396123 APOBP04114 4563 aaKnown RBP5.16□□□□□ -1.58
GREB1-206ENST00000396123 KMT2AQ03164 3969 aa5.14□□□□□ -1.59
GREB1-206ENST00000396123 MT1FP04733 61 aa5.14□□□□□ -1.59
GREB1-206ENST00000396123 VPS13BQ7Z7G8 4022 aa5.11□□□□□ -1.59
GREB1-206ENST00000396123 KRTAP10-5P60370 271 aa5.11□□□□□ -1.59
GREB1-206ENST00000396123 LYSTQ99698 3801 aa5.06□□□□□ -1.6
GREB1-206ENST00000396123 MYCBP2O75592 4640 aa5.04□□□□□ -1.6
GREB1-206ENST00000396123 KIAA1109Q2LD37 5005 aa5.03□□□□□ -1.6
GREB1-206ENST00000396123 KRTAP17-1Q9BYP8 105 aa5.01□□□□□ -1.61
GREB1-206ENST00000396123 RYR3Q15413 4870 aa5□□□□□ -1.61
GREB1-206ENST00000396123 KRTAP19-5Q3LI72 72 aa4.98□□□□□ -1.61
GREB1-206ENST00000396123 SPRR2FQ96RM1 72 aa4.94□□□□□ -1.62
GREB1-206ENST00000396123 KRTAP19-1Q8IUB9 90 aa4.94□□□□□ -1.62
GREB1-206ENST00000396123 LRP1Q07954 4544 aaKnown RBP4.92□□□□□ -1.62
GREB1-206ENST00000396123 DNAH6Q9C0G6 4158 aa4.92□□□□□ -1.62
GREB1-206ENST00000396123 FRAS1Q86XX4 4008 aa4.92□□□□□ -1.62
GREB1-206ENST00000396123 LCE3CQ5T5A8 94 aa4.92□□□□□ -1.62
GREB1-206ENST00000396123 KRTAP19-8Q3LI54 63 aa4.9□□□□□ -1.62
GREB1-206ENST00000396123 HECTD4Q9Y4D8 3996 aa4.9□□□□□ -1.62
GREB1-206ENST00000396123 RYR2Q92736 4967 aa4.9□□□□□ -1.63
GREB1-206ENST00000396123 KRTAP10-7P60409 375 aaPredicted RBP4.9□□□□□ -1.63
GREB1-206ENST00000396123 CMYA5Q8N3K9 4069 aa4.89□□□□□ -1.63
GREB1-206ENST00000396123 FAT3Q8TDW7 4589 aa4.89□□□□□ -1.63
GREB1-206ENST00000396123 DNAH7Q8WXX0 4024 aa4.88□□□□□ -1.63
GREB1-206ENST00000396123 KRTAP19-4Q3LI73 84 aa4.84□□□□□ -1.63
GREB1-206ENST00000396123 MT1XP80297 61 aa4.77□□□□□ -1.65
GREB1-206ENST00000396123 MT1BP07438 61 aa4.74□□□□□ -1.65
GREB1-206ENST00000396123 KRTAP9-8Q9BYQ0 159 aa4.73□□□□□ -1.65
GREB1-206ENST00000396123 LRP2P98164 4655 aa4.71□□□□□ -1.65
GREB1-206ENST00000396123 HERC2O95714 4834 aa4.71□□□□□ -1.66
GREB1-206ENST00000396123 HYDINQ4G0P3 5121 aa4.7□□□□□ -1.66
GREB1-206ENST00000396123 LCE2CQ5TA81 110 aa4.69□□□□□ -1.66
GREB1-206ENST00000396123 HSPG2P98160 4391 aa4.65□□□□□ -1.67
GREB1-206ENST00000396123 SPRR5A0A1B0GTR4 108 aa4.63□□□□□ -1.67
GREB1-206ENST00000396123 SPRR2EP22531 72 aa4.63□□□□□ -1.67
GREB1-206ENST00000396123 SPRR2BP35325 72 aa4.63□□□□□ -1.67
GREB1-206ENST00000396123 SPRR2AP35326 72 aa4.63□□□□□ -1.67
GREB1-206ENST00000396123 PKD1P98161 4303 aa4.62□□□□□ -1.67
GREB1-206ENST00000396123 PKHD1P08F94 4074 aa4.61□□□□□ -1.67
GREB1-206ENST00000396123 KRTAP9-3Q9BYQ3 159 aa4.61□□□□□ -1.67
GREB1-206ENST00000396123 HERC1Q15751 4861 aa4.56□□□□□ -1.68
GREB1-206ENST00000396123 BIRC6Q9NR09 4857 aa4.56□□□□□ -1.68
GREB1-206ENST00000396123 KRTAP4-8A0A0G2JLE6 195 aa4.55□□□□□ -1.68
GREB1-206ENST00000396123 KRTAP4-8Q9BYQ9 185 aa4.55□□□□□ -1.68
GREB1-206ENST00000396123 PCLOQ9Y6V0 5065 aa4.53□□□□□ -1.68
GREB1-206ENST00000396123 KRTAP19-2Q3LHN2 52 aa4.52□□□□□ -1.69
GREB1-206ENST00000396123 LPAP08519 4548 aa4.49□□□□□ -1.69
GREB1-206ENST00000396123 MT1GP13640 62 aa4.49□□□□□ -1.69
GREB1-206ENST00000396123 KMT2CQ8NEZ4 4911 aaKnown RBP4.49□□□□□ -1.69
GREB1-206ENST00000396123 SPRR2DP22532 72 aa4.48□□□□□ -1.69
GREB1-206ENST00000396123 LCE2BO14633 110 aa4.47□□□□□ -1.69
GREB1-206ENST00000396123 LCE3BQ5TA77 95 aa4.46□□□□□ -1.7
GREB1-206ENST00000396123 PKHD1L1Q86WI1 4243 aa4.42□□□□□ -1.7
GREB1-206ENST00000396123 KRTAP12-4P60329 112 aa4.42□□□□□ -1.7
GREB1-206ENST00000396123 MUC17Q685J3 4493 aa4.41□□□□□ -1.7
GREB1-206ENST00000396123 TNXBP22105 4242 aa4.4□□□□□ -1.71
GREB1-206ENST00000396123 FLGP20930 4061 aaPredicted RBP4.35□□□□□ -1.71
GREB1-206ENST00000396123 MT1LQ93083 61 aa4.31□□□□□ -1.72
GREB1-206ENST00000396123 KRTAP19-3Q7Z4W3 81 aa4.3□□□□□ -1.72
GREB1-206ENST00000396123 KRTAP4-7Q9BYR0 210 aa4.3□□□□□ -1.72
GREB1-206ENST00000396123 MT1EP04732 61 aa4.28□□□□□ -1.72
GREB1-206ENST00000396123 ABCA13Q86UQ4 5058 aa4.27□□□□□ -1.73
GREB1-206ENST00000396123 EPPK1P58107 5090 aaKnown RBP4.26□□□□□ -1.73
GREB1-206ENST00000396123 LCE3DQ9BYE3 92 aa4.25□□□□□ -1.73
GREB1-206ENST00000396123 LCE3EQ5T5B0 92 aa4.19□□□□□ -1.74
GREB1-206ENST00000396123 KRTAP19-6Q3LI70 58 aa4.13□□□□□ -1.75
GREB1-206ENST00000396123 MT1MQ8N339 61 aa4.12□□□□□ -1.75
GREB1-206ENST00000396123 LCE2DQ5TA82 110 aaPredicted RBP4.11□□□□□ -1.75
GREB1-206ENST00000396123 FAT4Q6V0I7 4981 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms