RNA–Protein interactions for RNA: ENST00000393561.5

LAMB1-204, Transcript of laminin subunit beta 1, humanhuman

TSL 5 BASIC

Gene LAMB1, Length 5,766 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMB1-204ENST00000393561 ALMS1Q8TCU4 4167 aa5.01□□□□□ -1.61
LAMB1-204ENST00000393561 LCE3AQ5TA76 89 aa5□□□□□ -1.61
LAMB1-204ENST00000393561 LORP23490 312 aaPredicted RBP4.94□□□□□ -1.62
LAMB1-204ENST00000393561 ANK2Q01484 3957 aa4.87□□□□□ -1.63
LAMB1-204ENST00000393561 CMYA5Q8N3K9 4069 aa4.83□□□□□ -1.64
LAMB1-204ENST00000393561 KRTAP8-1Q8IUC2 63 aa4.8□□□□□ -1.64
LAMB1-204ENST00000393561 DNAH9Q9NYC9 4486 aa4.77□□□□□ -1.65
LAMB1-204ENST00000393561 DNAH5Q8TE73 4624 aa4.75□□□□□ -1.65
LAMB1-204ENST00000393561 KRTAP10-5P60370 271 aa4.72□□□□□ -1.65
LAMB1-204ENST00000393561 DNAH2Q9P225 4427 aa4.72□□□□□ -1.65
LAMB1-204ENST00000393561 DNAH10Q8IVF4 4471 aa4.71□□□□□ -1.66
LAMB1-204ENST00000393561 KRTAP4-1Q9BYQ7 146 aa4.7□□□□□ -1.66
LAMB1-204ENST00000393561 MT1HP80294 61 aa4.69□□□□□ -1.66
LAMB1-204ENST00000393561 CSMD3Q7Z407 3707 aa4.66□□□□□ -1.66
LAMB1-204ENST00000393561 DNAH1Q9P2D7 4330 aa4.66□□□□□ -1.66
LAMB1-204ENST00000393561 LYSTQ99698 3801 aa4.66□□□□□ -1.66
LAMB1-204ENST00000393561 DNAH3Q8TD57 4116 aa4.65□□□□□ -1.67
LAMB1-204ENST00000393561 SPRR2GQ9BYE4 73 aa4.64□□□□□ -1.67
LAMB1-204ENST00000393561 DNAH11Q96DT5 4516 aa4.64□□□□□ -1.67
LAMB1-204ENST00000393561 PLECQ15149 4684 aaKnown RBP4.64□□□□□ -1.67
LAMB1-204ENST00000393561 MT2AP02795 61 aa4.63□□□□□ -1.67
LAMB1-204ENST00000393561 DNAH17Q9UFH2 4485 aa4.58□□□□□ -1.68
LAMB1-204ENST00000393561 VPS13DQ5THJ4 4388 aa4.54□□□□□ -1.68
LAMB1-204ENST00000393561 DNAH7Q8WXX0 4024 aa4.54□□□□□ -1.68
LAMB1-204ENST00000393561 DNHD1Q96M86 4753 aa4.54□□□□□ -1.68
LAMB1-204ENST00000393561 MT1FP04733 61 aa4.52□□□□□ -1.69
LAMB1-204ENST00000393561 DYNC1H1Q14204 4646 aaKnown RBP4.48□□□□□ -1.69
LAMB1-204ENST00000393561 PRKDCP78527 4128 aaKnown RBP4.48□□□□□ -1.69
LAMB1-204ENST00000393561 KRTAP19-5Q3LI72 72 aa4.48□□□□□ -1.69
LAMB1-204ENST00000393561 STARD9Q9P2P6 4700 aa4.47□□□□□ -1.69
LAMB1-204ENST00000393561 FAT1Q14517 4588 aa4.47□□□□□ -1.69
LAMB1-204ENST00000393561 KRTAP10-7P60409 375 aaPredicted RBP4.44□□□□□ -1.7
LAMB1-204ENST00000393561 SACSQ9NZJ4 4579 aa4.44□□□□□ -1.7
LAMB1-204ENST00000393561 KRTAP19-4Q3LI73 84 aa4.44□□□□□ -1.7
LAMB1-204ENST00000393561 LCE3CQ5T5A8 94 aa4.44□□□□□ -1.7
LAMB1-204ENST00000393561 LRP1BQ9NZR2 4599 aa4.43□□□□□ -1.7
LAMB1-204ENST00000393561 SPRR2FQ96RM1 72 aa4.43□□□□□ -1.7
LAMB1-204ENST00000393561 DYNC2H1Q8NCM8 4307 aaKnown RBP4.43□□□□□ -1.7
LAMB1-204ENST00000393561 KMT2AQ03164 3969 aa4.41□□□□□ -1.7
LAMB1-204ENST00000393561 FAT2Q9NYQ8 4349 aa4.4□□□□□ -1.71
LAMB1-204ENST00000393561 FRAS1Q86XX4 4008 aa4.39□□□□□ -1.71
LAMB1-204ENST00000393561 DNAH8Q96JB1 4490 aa4.38□□□□□ -1.71
LAMB1-204ENST00000393561 DNAH6Q9C0G6 4158 aa4.37□□□□□ -1.71
LAMB1-204ENST00000393561 RYR1P21817 5038 aa4.33□□□□□ -1.72
LAMB1-204ENST00000393561 KRTAP19-8Q3LI54 63 aa4.3□□□□□ -1.72
LAMB1-204ENST00000393561 HECTD4Q9Y4D8 3996 aa4.3□□□□□ -1.72
LAMB1-204ENST00000393561 APOBP04114 4563 aaKnown RBP4.28□□□□□ -1.72
LAMB1-204ENST00000393561 VPS13BQ7Z7G8 4022 aa4.28□□□□□ -1.72
LAMB1-204ENST00000393561 HYDINQ4G0P3 5121 aa4.25□□□□□ -1.73
LAMB1-204ENST00000393561 KRTAP19-1Q8IUB9 90 aa4.25□□□□□ -1.73
LAMB1-204ENST00000393561 MT1XP80297 61 aa4.17□□□□□ -1.74
LAMB1-204ENST00000393561 RYR3Q15413 4870 aa4.17□□□□□ -1.74
LAMB1-204ENST00000393561 LRP1Q07954 4544 aaKnown RBP4.17□□□□□ -1.74
LAMB1-204ENST00000393561 SPRR2EP22531 72 aa4.16□□□□□ -1.74
LAMB1-204ENST00000393561 SPRR2BP35325 72 aa4.16□□□□□ -1.74
LAMB1-204ENST00000393561 SPRR2AP35326 72 aa4.16□□□□□ -1.74
LAMB1-204ENST00000393561 FAT3Q8TDW7 4589 aa4.15□□□□□ -1.74
LAMB1-204ENST00000393561 PKD1P98161 4303 aa4.13□□□□□ -1.75
LAMB1-204ENST00000393561 PKHD1P08F94 4074 aa4.13□□□□□ -1.75
LAMB1-204ENST00000393561 MT1BP07438 61 aa4.12□□□□□ -1.75
LAMB1-204ENST00000393561 HERC1Q15751 4861 aa4.11□□□□□ -1.75
LAMB1-204ENST00000393561 KRTAP17-1Q9BYP8 105 aa4.11□□□□□ -1.75
LAMB1-204ENST00000393561 LCE3BQ5TA77 95 aa4.08□□□□□ -1.76
LAMB1-204ENST00000393561 KMT2CQ8NEZ4 4911 aaKnown RBP4.08□□□□□ -1.76
LAMB1-204ENST00000393561 KRTAP9-8Q9BYQ0 159 aa4.07□□□□□ -1.76
LAMB1-204ENST00000393561 RYR2Q92736 4967 aa4.06□□□□□ -1.76
LAMB1-204ENST00000393561 MT1GP13640 62 aa4.05□□□□□ -1.76
LAMB1-204ENST00000393561 HSPG2P98160 4391 aa4.04□□□□□ -1.76
LAMB1-204ENST00000393561 SPRR2DP22532 72 aa4.03□□□□□ -1.76
LAMB1-204ENST00000393561 LCE2BO14633 110 aa4.02□□□□□ -1.77
LAMB1-204ENST00000393561 SPRR5A0A1B0GTR4 108 aa4.01□□□□□ -1.77
LAMB1-204ENST00000393561 KRTAP12-4P60329 112 aa4□□□□□ -1.77
LAMB1-204ENST00000393561 KRTAP9-3Q9BYQ3 159 aa4□□□□□ -1.77
LAMB1-204ENST00000393561 MYCBP2O75592 4640 aa3.99□□□□□ -1.77
LAMB1-204ENST00000393561 LCE2CQ5TA81 110 aa3.97□□□□□ -1.77
LAMB1-204ENST00000393561 KRTAP4-8A0A0G2JLE6 195 aa3.97□□□□□ -1.77
LAMB1-204ENST00000393561 KRTAP4-8Q9BYQ9 185 aa3.97□□□□□ -1.77
LAMB1-204ENST00000393561 KIAA1109Q2LD37 5005 aa3.97□□□□□ -1.77
LAMB1-204ENST00000393561 PKHD1L1Q86WI1 4243 aa3.92□□□□□ -1.78
LAMB1-204ENST00000393561 LCE3DQ9BYE3 92 aa3.9□□□□□ -1.79
LAMB1-204ENST00000393561 TNXBP22105 4242 aa3.87□□□□□ -1.79
LAMB1-204ENST00000393561 KRTAP19-3Q7Z4W3 81 aa3.85□□□□□ -1.79
LAMB1-204ENST00000393561 LCE3EQ5T5B0 92 aa3.84□□□□□ -1.79
LAMB1-204ENST00000393561 EPPK1P58107 5090 aaKnown RBP3.83□□□□□ -1.8
LAMB1-204ENST00000393561 MT1LQ93083 61 aa3.81□□□□□ -1.8
LAMB1-204ENST00000393561 HERC2O95714 4834 aa3.8□□□□□ -1.8
LAMB1-204ENST00000393561 BIRC6Q9NR09 4857 aa3.8□□□□□ -1.8
LAMB1-204ENST00000393561 LPAP08519 4548 aa3.78□□□□□ -1.8
LAMB1-204ENST00000393561 MT1EP04732 61 aa3.78□□□□□ -1.81
LAMB1-204ENST00000393561 KRTAP19-2Q3LHN2 52 aa3.76□□□□□ -1.81
LAMB1-204ENST00000393561 PCLOQ9Y6V0 5065 aa3.75□□□□□ -1.81
LAMB1-204ENST00000393561 KRTAP4-7Q9BYR0 210 aa3.74□□□□□ -1.81
LAMB1-204ENST00000393561 LRP2P98164 4655 aa3.72□□□□□ -1.81
LAMB1-204ENST00000393561 LCE2DQ5TA82 110 aaPredicted RBP3.68□□□□□ -1.82
LAMB1-204ENST00000393561 MT1MQ8N339 61 aa3.66□□□□□ -1.82
LAMB1-204ENST00000393561 ABCA13Q86UQ4 5058 aa3.65□□□□□ -1.83
LAMB1-204ENST00000393561 MT3P25713 68 aa3.64□□□□□ -1.83
LAMB1-204ENST00000393561 KRTAP19-6Q3LI70 58 aa3.64□□□□□ -1.83
LAMB1-204ENST00000393561 MUC17Q685J3 4493 aa3.63□□□□□ -1.83
LAMB1-204ENST00000393561 FLGP20930 4061 aaPredicted RBP3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms