RNA–Protein interactions for RNA: ENST00000380817.7

SBF1-202, Transcript of SET binding factor 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SBF1, Length 8,008 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBF1-202ENST00000380817 KRTAP19-4Q3LI73 84 aa5.85□□□□□ -1.47
SBF1-202ENST00000380817 HUWE1Q7Z6Z7 4374 aaKnown RBP5.84□□□□□ -1.47
SBF1-202ENST00000380817 ALMS1Q8TCU4 4167 aa5.84□□□□□ -1.48
SBF1-202ENST00000380817 KRTAP8-1Q8IUC2 63 aa5.83□□□□□ -1.48
SBF1-202ENST00000380817 KRTAP10-4P60372 401 aaPredicted RBP5.82□□□□□ -1.48
SBF1-202ENST00000380817 KRTAP4-5Q9BYR2 181 aa5.77□□□□□ -1.49
SBF1-202ENST00000380817 LORP23490 312 aaPredicted RBP5.73□□□□□ -1.49
SBF1-202ENST00000380817 DNAH1Q9P2D7 4330 aa5.71□□□□□ -1.5
SBF1-202ENST00000380817 DNAH9Q9NYC9 4486 aa5.6□□□□□ -1.51
SBF1-202ENST00000380817 SPRR2GQ9BYE4 73 aa5.58□□□□□ -1.52
SBF1-202ENST00000380817 DNAH2Q9P225 4427 aa5.54□□□□□ -1.52
SBF1-202ENST00000380817 KRTAP10-7P60409 375 aaPredicted RBP5.54□□□□□ -1.52
SBF1-202ENST00000380817 ANK2Q01484 3957 aa5.52□□□□□ -1.53
SBF1-202ENST00000380817 DNAH3Q8TD57 4116 aa5.48□□□□□ -1.53
SBF1-202ENST00000380817 FRAS1Q86XX4 4008 aa5.47□□□□□ -1.53
SBF1-202ENST00000380817 CMYA5Q8N3K9 4069 aa5.46□□□□□ -1.54
SBF1-202ENST00000380817 LCE3CQ5T5A8 94 aa5.45□□□□□ -1.54
SBF1-202ENST00000380817 DNAH7Q8WXX0 4024 aa5.44□□□□□ -1.54
SBF1-202ENST00000380817 DNAH10Q8IVF4 4471 aa5.37□□□□□ -1.55
SBF1-202ENST00000380817 PLECQ15149 4684 aaKnown RBP5.36□□□□□ -1.55
SBF1-202ENST00000380817 MT1HP80294 61 aa5.34□□□□□ -1.55
SBF1-202ENST00000380817 VPS13DQ5THJ4 4388 aa5.34□□□□□ -1.55
SBF1-202ENST00000380817 PRKDCP78527 4128 aaKnown RBP5.33□□□□□ -1.56
SBF1-202ENST00000380817 DNAH5Q8TE73 4624 aa5.32□□□□□ -1.56
SBF1-202ENST00000380817 LYSTQ99698 3801 aa5.32□□□□□ -1.56
SBF1-202ENST00000380817 VPS13BQ7Z7G8 4022 aa5.32□□□□□ -1.56
SBF1-202ENST00000380817 KRTAP19-5Q3LI72 72 aa5.3□□□□□ -1.56
SBF1-202ENST00000380817 MT2AP02795 61 aa5.28□□□□□ -1.56
SBF1-202ENST00000380817 KMT2AQ03164 3969 aa5.27□□□□□ -1.57
SBF1-202ENST00000380817 DNAH6Q9C0G6 4158 aa5.27□□□□□ -1.57
SBF1-202ENST00000380817 DNHD1Q96M86 4753 aa5.27□□□□□ -1.57
SBF1-202ENST00000380817 SPRR2FQ96RM1 72 aa5.26□□□□□ -1.57
SBF1-202ENST00000380817 KRTAP4-1Q9BYQ7 146 aa5.25□□□□□ -1.57
SBF1-202ENST00000380817 STARD9Q9P2P6 4700 aa5.24□□□□□ -1.57
SBF1-202ENST00000380817 DNAH11Q96DT5 4516 aa5.24□□□□□ -1.57
SBF1-202ENST00000380817 DNAH17Q9UFH2 4485 aa5.21□□□□□ -1.58
SBF1-202ENST00000380817 DNAH8Q96JB1 4490 aa5.21□□□□□ -1.58
SBF1-202ENST00000380817 HECTD4Q9Y4D8 3996 aa5.2□□□□□ -1.58
SBF1-202ENST00000380817 DYNC2H1Q8NCM8 4307 aaKnown RBP5.17□□□□□ -1.58
SBF1-202ENST00000380817 FAT2Q9NYQ8 4349 aa5.15□□□□□ -1.58
SBF1-202ENST00000380817 LRP1BQ9NZR2 4599 aa5.1□□□□□ -1.59
SBF1-202ENST00000380817 MT1FP04733 61 aa5.1□□□□□ -1.59
SBF1-202ENST00000380817 DYNC1H1Q14204 4646 aaKnown RBP5.08□□□□□ -1.6
SBF1-202ENST00000380817 KRTAP19-8Q3LI54 63 aa5.06□□□□□ -1.6
SBF1-202ENST00000380817 KRTAP12-4P60329 112 aa5.02□□□□□ -1.61
SBF1-202ENST00000380817 LCE3BQ5TA77 95 aa5□□□□□ -1.61
SBF1-202ENST00000380817 SPRR5A0A1B0GTR4 108 aa4.93□□□□□ -1.62
SBF1-202ENST00000380817 SPRR2EP22531 72 aa4.93□□□□□ -1.62
SBF1-202ENST00000380817 SPRR2BP35325 72 aa4.93□□□□□ -1.62
SBF1-202ENST00000380817 SPRR2AP35326 72 aa4.93□□□□□ -1.62
SBF1-202ENST00000380817 FAT1Q14517 4588 aa4.91□□□□□ -1.62
SBF1-202ENST00000380817 SACSQ9NZJ4 4579 aa4.9□□□□□ -1.62
SBF1-202ENST00000380817 FLGP20930 4061 aaPredicted RBP4.9□□□□□ -1.63
SBF1-202ENST00000380817 LCE2BO14633 110 aa4.89□□□□□ -1.63
SBF1-202ENST00000380817 MT1GP13640 62 aa4.87□□□□□ -1.63
SBF1-202ENST00000380817 LCE3DQ9BYE3 92 aa4.86□□□□□ -1.63
SBF1-202ENST00000380817 KRTAP19-1Q8IUB9 90 aa4.86□□□□□ -1.63
SBF1-202ENST00000380817 LRP1Q07954 4544 aaKnown RBP4.85□□□□□ -1.63
SBF1-202ENST00000380817 RYR1P21817 5038 aa4.84□□□□□ -1.63
SBF1-202ENST00000380817 MT1XP80297 61 aa4.82□□□□□ -1.64
SBF1-202ENST00000380817 SPRR2DP22532 72 aa4.81□□□□□ -1.64
SBF1-202ENST00000380817 LCE3EQ5T5B0 92 aa4.81□□□□□ -1.64
SBF1-202ENST00000380817 MT3P25713 68 aa4.8□□□□□ -1.64
SBF1-202ENST00000380817 RYR3Q15413 4870 aa4.77□□□□□ -1.65
SBF1-202ENST00000380817 APOBP04114 4563 aaKnown RBP4.76□□□□□ -1.65
SBF1-202ENST00000380817 PKHD1P08F94 4074 aa4.7□□□□□ -1.66
SBF1-202ENST00000380817 KRTAP17-1Q9BYP8 105 aa4.69□□□□□ -1.66
SBF1-202ENST00000380817 MT1LQ93083 61 aa4.69□□□□□ -1.66
SBF1-202ENST00000380817 RYR2Q92736 4967 aa4.69□□□□□ -1.66
SBF1-202ENST00000380817 KIAA1109Q2LD37 5005 aa4.66□□□□□ -1.66
SBF1-202ENST00000380817 KRTAP4-8A0A0G2JLE6 195 aa4.65□□□□□ -1.67
SBF1-202ENST00000380817 KRTAP4-8Q9BYQ9 185 aa4.65□□□□□ -1.67
SBF1-202ENST00000380817 HSPG2P98160 4391 aa4.64□□□□□ -1.67
SBF1-202ENST00000380817 MT1BP07438 61 aa4.63□□□□□ -1.67
SBF1-202ENST00000380817 FAT3Q8TDW7 4589 aa4.61□□□□□ -1.67
SBF1-202ENST00000380817 PKD1P98161 4303 aa4.6□□□□□ -1.67
SBF1-202ENST00000380817 KRTAP9-8Q9BYQ0 159 aa4.59□□□□□ -1.67
SBF1-202ENST00000380817 MYCBP2O75592 4640 aa4.58□□□□□ -1.68
SBF1-202ENST00000380817 KRTAP19-3Q7Z4W3 81 aa4.58□□□□□ -1.68
SBF1-202ENST00000380817 HYDINQ4G0P3 5121 aa4.57□□□□□ -1.68
SBF1-202ENST00000380817 PKHD1L1Q86WI1 4243 aa4.57□□□□□ -1.68
SBF1-202ENST00000380817 LPAP08519 4548 aa4.54□□□□□ -1.68
SBF1-202ENST00000380817 LCE2CQ5TA81 110 aa4.53□□□□□ -1.68
SBF1-202ENST00000380817 BIRC6Q9NR09 4857 aa4.51□□□□□ -1.69
SBF1-202ENST00000380817 HERC2O95714 4834 aa4.51□□□□□ -1.69
SBF1-202ENST00000380817 KRTAP9-3Q9BYQ3 159 aa4.49□□□□□ -1.69
SBF1-202ENST00000380817 KRTAP4-7Q9BYR0 210 aa4.48□□□□□ -1.69
SBF1-202ENST00000380817 TNXBP22105 4242 aa4.45□□□□□ -1.7
SBF1-202ENST00000380817 MT1EP04732 61 aa4.43□□□□□ -1.7
SBF1-202ENST00000380817 LCE2DQ5TA82 110 aaPredicted RBP4.42□□□□□ -1.7
SBF1-202ENST00000380817 PCLOQ9Y6V0 5065 aa4.37□□□□□ -1.71
SBF1-202ENST00000380817 KMT2CQ8NEZ4 4911 aaKnown RBP4.37□□□□□ -1.71
SBF1-202ENST00000380817 LRP2P98164 4655 aa4.36□□□□□ -1.71
SBF1-202ENST00000380817 PRM1P04553 51 aa4.35□□□□□ -1.71
SBF1-202ENST00000380817 MT4P47944 62 aa4.33□□□□□ -1.72
SBF1-202ENST00000380817 HERC1Q15751 4861 aa4.31□□□□□ -1.72
SBF1-202ENST00000380817 LOC100996750A0A140TA64 210 aa4.29□□□□□ -1.72
SBF1-202ENST00000380817 MT1MQ8N339 61 aa4.28□□□□□ -1.72
SBF1-202ENST00000380817 LCE1BQ5T7P3 118 aa4.22□□□□□ -1.73
SBF1-202ENST00000380817 KRTAP19-2Q3LHN2 52 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms