RNA–Protein interactions for RNA: ENST00000362003.9

PCGF3-201, Transcript of polycomb group ring finger 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PCGF3, Length 5,685 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3-201ENST00000362003 DNAH2Q9P225 4427 aa7.31□□□□□ -1.24
PCGF3-201ENST00000362003 VPS13CQ709C8 3753 aa7.3□□□□□ -1.24
PCGF3-201ENST00000362003 DNAH1Q9P2D7 4330 aa7.29□□□□□ -1.24
PCGF3-201ENST00000362003 DNAH10Q8IVF4 4471 aa7.2□□□□□ -1.26
PCGF3-201ENST00000362003 DNAH5Q8TE73 4624 aa7.19□□□□□ -1.26
PCGF3-201ENST00000362003 DNAH17Q9UFH2 4485 aa7.16□□□□□ -1.26
PCGF3-201ENST00000362003 SRRM2Q9UQ35 2752 aaKnown RBP7.14□□□□□ -1.27
PCGF3-201ENST00000362003 VPS13DQ5THJ4 4388 aa7.13□□□□□ -1.27
PCGF3-201ENST00000362003 COL7A1Q02388 2944 aa7.13□□□□□ -1.27
PCGF3-201ENST00000362003 DNAH3Q8TD57 4116 aa7.12□□□□□ -1.27
PCGF3-201ENST00000362003 DNAH11Q96DT5 4516 aa7.12□□□□□ -1.27
PCGF3-201ENST00000362003 KRTAP4-1Q9BYQ7 146 aa7.1□□□□□ -1.27
PCGF3-201ENST00000362003 PLECQ15149 4684 aaKnown RBP7.1□□□□□ -1.27
PCGF3-201ENST00000362003 KRTAP8-1Q8IUC2 63 aa7.1□□□□□ -1.27
PCGF3-201ENST00000362003 MT1HP80294 61 aa7.08□□□□□ -1.28
PCGF3-201ENST00000362003 DYNC2H1Q8NCM8 4307 aaKnown RBP6.95□□□□□ -1.3
PCGF3-201ENST00000362003 ZNF469Q96JG9 3925 aaPredicted RBP6.95□□□□□ -1.3
PCGF3-201ENST00000362003 DYNC1H1Q14204 4646 aaKnown RBP6.93□□□□□ -1.3
PCGF3-201ENST00000362003 MT2AP02795 61 aa6.93□□□□□ -1.3
PCGF3-201ENST00000362003 FAT2Q9NYQ8 4349 aa6.93□□□□□ -1.3
PCGF3-201ENST00000362003 SPRR2GQ9BYE4 73 aa6.9□□□□□ -1.3
PCGF3-201ENST00000362003 DNAH6Q9C0G6 4158 aa6.88□□□□□ -1.31
PCGF3-201ENST00000362003 SACSQ9NZJ4 4579 aa6.86□□□□□ -1.31
PCGF3-201ENST00000362003 LRP1BQ9NZR2 4599 aa6.83□□□□□ -1.32
PCGF3-201ENST00000362003 KRTAP10-5P60370 271 aa6.81□□□□□ -1.32
PCGF3-201ENST00000362003 CSMD3Q7Z407 3707 aa6.8□□□□□ -1.32
PCGF3-201ENST00000362003 STARD9Q9P2P6 4700 aa6.79□□□□□ -1.32
PCGF3-201ENST00000362003 DNAH8Q96JB1 4490 aa6.78□□□□□ -1.32
PCGF3-201ENST00000362003 MT1FP04733 61 aa6.77□□□□□ -1.33
PCGF3-201ENST00000362003 ANK2Q01484 3957 aa6.75□□□□□ -1.33
PCGF3-201ENST00000362003 DNAH7Q8WXX0 4024 aa6.68□□□□□ -1.34
PCGF3-201ENST00000362003 PRKDCP78527 4128 aaKnown RBP6.68□□□□□ -1.34
PCGF3-201ENST00000362003 KRTAP19-5Q3LI72 72 aa6.62□□□□□ -1.35
PCGF3-201ENST00000362003 CMYA5Q8N3K9 4069 aa6.62□□□□□ -1.35
PCGF3-201ENST00000362003 DNHD1Q96M86 4753 aa6.59□□□□□ -1.35
PCGF3-201ENST00000362003 SPRR2FQ96RM1 72 aa6.56□□□□□ -1.36
PCGF3-201ENST00000362003 FAT1Q14517 4588 aa6.53□□□□□ -1.36
PCGF3-201ENST00000362003 KRTAP10-7P60409 375 aaPredicted RBP6.53□□□□□ -1.36
PCGF3-201ENST00000362003 LCE3CQ5T5A8 94 aa6.52□□□□□ -1.37
PCGF3-201ENST00000362003 VPS13BQ7Z7G8 4022 aa6.49□□□□□ -1.37
PCGF3-201ENST00000362003 KMT2AQ03164 3969 aa6.49□□□□□ -1.37
PCGF3-201ENST00000362003 APOBP04114 4563 aaKnown RBP6.48□□□□□ -1.37
PCGF3-201ENST00000362003 KRTAP19-4Q3LI73 84 aa6.47□□□□□ -1.37
PCGF3-201ENST00000362003 RYR1P21817 5038 aa6.45□□□□□ -1.38
PCGF3-201ENST00000362003 KRTAP19-8Q3LI54 63 aa6.42□□□□□ -1.38
PCGF3-201ENST00000362003 KRTAP17-1Q9BYP8 105 aa6.39□□□□□ -1.39
PCGF3-201ENST00000362003 FAT3Q8TDW7 4589 aa6.39□□□□□ -1.39
PCGF3-201ENST00000362003 RYR3Q15413 4870 aa6.37□□□□□ -1.39
PCGF3-201ENST00000362003 HERC1Q15751 4861 aa6.35□□□□□ -1.39
PCGF3-201ENST00000362003 KRTAP19-1Q8IUB9 90 aa6.32□□□□□ -1.4
PCGF3-201ENST00000362003 HECTD4Q9Y4D8 3996 aa6.3□□□□□ -1.4
PCGF3-201ENST00000362003 FRAS1Q86XX4 4008 aa6.29□□□□□ -1.4
PCGF3-201ENST00000362003 HSPG2P98160 4391 aa6.28□□□□□ -1.4
PCGF3-201ENST00000362003 RYR2Q92736 4967 aa6.25□□□□□ -1.41
PCGF3-201ENST00000362003 SPRR2EP22531 72 aa6.24□□□□□ -1.41
PCGF3-201ENST00000362003 SPRR2BP35325 72 aa6.24□□□□□ -1.41
PCGF3-201ENST00000362003 SPRR2AP35326 72 aa6.24□□□□□ -1.41
PCGF3-201ENST00000362003 MT1XP80297 61 aa6.23□□□□□ -1.41
PCGF3-201ENST00000362003 LRP1Q07954 4544 aaKnown RBP6.16□□□□□ -1.42
PCGF3-201ENST00000362003 MT1BP07438 61 aa6.16□□□□□ -1.42
PCGF3-201ENST00000362003 KRTAP9-8Q9BYQ0 159 aa6.15□□□□□ -1.42
PCGF3-201ENST00000362003 PKHD1L1Q86WI1 4243 aa6.11□□□□□ -1.43
PCGF3-201ENST00000362003 LYSTQ99698 3801 aa6.11□□□□□ -1.43
PCGF3-201ENST00000362003 MYCBP2O75592 4640 aa6.09□□□□□ -1.43
PCGF3-201ENST00000362003 SPRR2DP22532 72 aa6.05□□□□□ -1.44
PCGF3-201ENST00000362003 LCE2CQ5TA81 110 aa6.05□□□□□ -1.44
PCGF3-201ENST00000362003 KRTAP9-3Q9BYQ3 159 aa6.04□□□□□ -1.44
PCGF3-201ENST00000362003 LCE2BO14633 110 aa6□□□□□ -1.45
PCGF3-201ENST00000362003 MT1GP13640 62 aa5.99□□□□□ -1.45
PCGF3-201ENST00000362003 LCE3BQ5TA77 95 aa5.98□□□□□ -1.45
PCGF3-201ENST00000362003 PKD1P98161 4303 aa5.94□□□□□ -1.46
PCGF3-201ENST00000362003 KRTAP4-8A0A0G2JLE6 195 aa5.9□□□□□ -1.46
PCGF3-201ENST00000362003 KRTAP4-8Q9BYQ9 185 aa5.9□□□□□ -1.46
PCGF3-201ENST00000362003 BIRC6Q9NR09 4857 aa5.9□□□□□ -1.46
PCGF3-201ENST00000362003 KIAA1109Q2LD37 5005 aa5.87□□□□□ -1.47
PCGF3-201ENST00000362003 HYDINQ4G0P3 5121 aa5.86□□□□□ -1.47
PCGF3-201ENST00000362003 MUC17Q685J3 4493 aa5.85□□□□□ -1.47
PCGF3-201ENST00000362003 KRTAP12-4P60329 112 aa5.84□□□□□ -1.47
PCGF3-201ENST00000362003 TNXBP22105 4242 aa5.82□□□□□ -1.48
PCGF3-201ENST00000362003 SPRR5A0A1B0GTR4 108 aa5.82□□□□□ -1.48
PCGF3-201ENST00000362003 PKHD1P08F94 4074 aa5.74□□□□□ -1.49
PCGF3-201ENST00000362003 KRTAP19-2Q3LHN2 52 aa5.74□□□□□ -1.49
PCGF3-201ENST00000362003 KRTAP19-3Q7Z4W3 81 aa5.72□□□□□ -1.49
PCGF3-201ENST00000362003 HERC2O95714 4834 aa5.72□□□□□ -1.49
PCGF3-201ENST00000362003 LPAP08519 4548 aa5.71□□□□□ -1.5
PCGF3-201ENST00000362003 MT1LQ93083 61 aa5.65□□□□□ -1.5
PCGF3-201ENST00000362003 LCE3DQ9BYE3 92 aa5.64□□□□□ -1.51
PCGF3-201ENST00000362003 MT1EP04732 61 aa5.62□□□□□ -1.51
PCGF3-201ENST00000362003 LRP2P98164 4655 aa5.56□□□□□ -1.52
PCGF3-201ENST00000362003 FLGP20930 4061 aaPredicted RBP5.55□□□□□ -1.52
PCGF3-201ENST00000362003 PCLOQ9Y6V0 5065 aa5.55□□□□□ -1.52
PCGF3-201ENST00000362003 LCE3EQ5T5B0 92 aa5.54□□□□□ -1.52
PCGF3-201ENST00000362003 KRTAP4-7Q9BYR0 210 aa5.53□□□□□ -1.52
PCGF3-201ENST00000362003 KRTAP19-6Q3LI70 58 aa5.52□□□□□ -1.53
PCGF3-201ENST00000362003 LCE2DQ5TA82 110 aaPredicted RBP5.47□□□□□ -1.53
PCGF3-201ENST00000362003 MT1MQ8N339 61 aa5.45□□□□□ -1.54
PCGF3-201ENST00000362003 KMT2CQ8NEZ4 4911 aaKnown RBP5.42□□□□□ -1.54
PCGF3-201ENST00000362003 KRTAP9-2Q9BYQ4 174 aa5.39□□□□□ -1.55
PCGF3-201ENST00000362003 MT3P25713 68 aa5.32□□□□□ -1.56
PCGF3-201ENST00000362003 MT4P47944 62 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms