RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 TRAV10A0A0B4J240 114 aa0.76□□□□□ -2.29
BRCA1-202ENST00000354071 TRBV6-4A0A1B0GX49 114 aa0.76□□□□□ -2.29
BRCA1-202ENST00000354071 C19orf84I3L1E1 186 aa0.76□□□□□ -2.29
BRCA1-202ENST00000354071 M0QY20 66 aa0.76□□□□□ -2.29
BRCA1-202ENST00000354071 PRLHP81277 87 aa0.76□□□□□ -2.29
BRCA1-202ENST00000354071 KRTAP13-3Q3SY46 172 aa0.76□□□□□ -2.29
BRCA1-202ENST00000354071 ZCCHC13Q8WW36 166 aaKnown RBP0.76□□□□□ -2.29
BRCA1-202ENST00000354071 ANAPC1Q9H1A4 1944 aa0.76□□□□□ -2.29
BRCA1-202ENST00000354071 LOC101927531A0A1B0GV80 90 aa0.76□□□□□ -2.29
BRCA1-202ENST00000354071 UQCR11O14957 56 aa0.76□□□□□ -2.29
BRCA1-202ENST00000354071 ERC2-IT1O76042 136 aa0.76□□□□□ -2.29
BRCA1-202ENST00000354071 IGLV3-1P01715 115 aa0.76□□□□□ -2.29
BRCA1-202ENST00000354071 DEFB136Q30KP8 78 aa0.76□□□□□ -2.29
BRCA1-202ENST00000354071 PHF5AQ7RTV0 110 aaKnown RBP0.76□□□□□ -2.29
BRCA1-202ENST00000354071 BPESC1Q9GZL8 116 aa0.76□□□□□ -2.29
BRCA1-202ENST00000354071 CRIP1P50238 77 aa0.76□□□□□ -2.29
BRCA1-202ENST00000354071 POLR2KP53803 58 aaKnown RBP0.76□□□□□ -2.29
BRCA1-202ENST00000354071 KRTAP12-1P59990 96 aa0.76□□□□□ -2.29
BRCA1-202ENST00000354071 DEFB1P60022 68 aa0.76□□□□□ -2.29
BRCA1-202ENST00000354071 TP53AIP1Q9HCN2 124 aa0.76□□□□□ -2.29
BRCA1-202ENST00000354071 C6orf48Q9UBA6 75 aa0.76□□□□□ -2.29
BRCA1-202ENST00000354071 NCOA6Q14686 2063 aaPredicted RBP0.75□□□□□ -2.29
BRCA1-202ENST00000354071 A0A087WSZ3 146 aa0.75□□□□□ -2.29
BRCA1-202ENST00000354071 TRAV22A0A0B4J277 110 aa0.75□□□□□ -2.29
BRCA1-202ENST00000354071 IGIPA6NJ69 53 aa0.75□□□□□ -2.29
BRCA1-202ENST00000354071 E7EUB6 86 aa0.75□□□□□ -2.29
BRCA1-202ENST00000354071 ANK1P16157 1881 aa0.75□□□□□ -2.29
BRCA1-202ENST00000354071 FLG2Q5D862 2391 aaPredicted RBP0.75□□□□□ -2.29
BRCA1-202ENST00000354071 LINC00959A0A1B0GUT2 108 aa0.75□□□□□ -2.29
BRCA1-202ENST00000354071 ELOF1P60002 83 aaKnown RBP0.75□□□□□ -2.29
BRCA1-202ENST00000354071 MIR22HGQ0VDD5 57 aa0.75□□□□□ -2.29
BRCA1-202ENST00000354071 FP248Q71RG6 208 aaPredicted RBP0.75□□□□□ -2.29
BRCA1-202ENST00000354071 Q8IZM0 81 aa0.75□□□□□ -2.29
BRCA1-202ENST00000354071 LINC01600Q96MT4 127 aa0.75□□□□□ -2.29
BRCA1-202ENST00000354071 Q1T7F1 81 aa0.75□□□□□ -2.29
BRCA1-202ENST00000354071 CDC42SE2Q9NRR3 84 aa0.75□□□□□ -2.29
BRCA1-202ENST00000354071 NUP98P52948 1817 aa0.75□□□□□ -2.29
BRCA1-202ENST00000354071 DEFB4AO15263 64 aa0.74□□□□□ -2.29
BRCA1-202ENST00000354071 KLKP1Q107X0 134 aa0.74□□□□□ -2.29
BRCA1-202ENST00000354071 SPRNQ5BIV9 151 aa0.74□□□□□ -2.29
BRCA1-202ENST00000354071 COA5Q86WW8 74 aa0.74□□□□□ -2.29
BRCA1-202ENST00000354071 CNFNQ9BYD5 112 aa0.74□□□□□ -2.29
BRCA1-202ENST00000354071 CDC42SE1Q9NRR8 79 aa0.74□□□□□ -2.29
BRCA1-202ENST00000354071 MUC17Q685J3 4493 aa0.74□□□□□ -2.29
BRCA1-202ENST00000354071 DEFB135Q30KP9 77 aa0.74□□□□□ -2.29
BRCA1-202ENST00000354071 LYPD5Q6UWN5 251 aa0.74□□□□□ -2.29
BRCA1-202ENST00000354071 UNQ6190/PRO20217Q6UXQ8 127 aa0.74□□□□□ -2.29
BRCA1-202ENST00000354071 EXPH5Q8NEV8 1989 aa0.74□□□□□ -2.29
BRCA1-202ENST00000354071 NUPR2A6NF83 97 aa0.74□□□□□ -2.29
BRCA1-202ENST00000354071 H7BZZ5 65 aa0.74□□□□□ -2.29
BRCA1-202ENST00000354071 AMELXQ99217 191 aa0.74□□□□□ -2.29
BRCA1-202ENST00000354071 LOC110117498A0A087WWA1 95 aa0.74□□□□□ -2.29
BRCA1-202ENST00000354071 A8MTW9 85 aa0.74□□□□□ -2.29
BRCA1-202ENST00000354071 COX6A2Q02221 97 aa0.74□□□□□ -2.29
BRCA1-202ENST00000354071 APLNQ9ULZ1 77 aa0.74□□□□□ -2.29
BRCA1-202ENST00000354071 CNBPP62633 177 aaKnown RBP0.73□□□□□ -2.29
BRCA1-202ENST00000354071 LCE1CQ5T751 118 aa0.73□□□□□ -2.29
BRCA1-202ENST00000354071 LCE1BQ5T7P3 118 aa0.73□□□□□ -2.29
BRCA1-202ENST00000354071 C4orf3Q8WVX3 66 aa0.73□□□□□ -2.29
BRCA1-202ENST00000354071 RGPD2P0DJD1 1756 aa0.73□□□□□ -2.29
BRCA1-202ENST00000354071 FOCADQ5VW36 1801 aa0.73□□□□□ -2.29
BRCA1-202ENST00000354071 TRBV7-4A0A0J9YYF1 115 aa0.73□□□□□ -2.29
BRCA1-202ENST00000354071 Q8N2B8 174 aa0.73□□□□□ -2.29
BRCA1-202ENST00000354071 DEFB131BA0A096LNP1 70 aa0.73□□□□□ -2.29
BRCA1-202ENST00000354071 DEFB114Q30KQ6 69 aa0.73□□□□□ -2.29
BRCA1-202ENST00000354071 SMR3AQ99954 134 aa0.73□□□□□ -2.29
BRCA1-202ENST00000354071 SRRM2Q9UQ35 2752 aaKnown RBP0.73□□□□□ -2.29
BRCA1-202ENST00000354071 EML5Q05BV3 1969 aa0.72□□□□□ -2.29
BRCA1-202ENST00000354071 KRTAP13-4Q3LI77 160 aa0.72□□□□□ -2.29
BRCA1-202ENST00000354071 PP632Q6XCG6 107 aa0.72□□□□□ -2.29
BRCA1-202ENST00000354071 DMAC1Q96GE9 116 aa0.72□□□□□ -2.29
BRCA1-202ENST00000354071 TANC1Q9C0D5 1861 aa0.72□□□□□ -2.29
BRCA1-202ENST00000354071 KIAA1549LQ6ZVL6 1849 aa0.72□□□□□ -2.29
BRCA1-202ENST00000354071 LINC01546A6NGU7 62 aa0.72□□□□□ -2.29
BRCA1-202ENST00000354071 CEP192Q8TEP8 1941 aa0.72□□□□□ -2.29
BRCA1-202ENST00000354071 RPL37AP61513 92 aaKnown RBP0.72□□□□□ -2.29
BRCA1-202ENST00000354071 CSAG1Q6PB30 78 aa0.72□□□□□ -2.29
BRCA1-202ENST00000354071 K7EQZ3 153 aa0.71□□□□□ -2.3
BRCA1-202ENST00000354071 LINC01556Q5JQF7 62 aa0.71□□□□□ -2.3
BRCA1-202ENST00000354071 LCE3AQ5TA76 89 aa0.71□□□□□ -2.3
BRCA1-202ENST00000354071 KRTAP13-1Q8IUC0 172 aa0.71□□□□□ -2.3
BRCA1-202ENST00000354071 MRPL34Q9BQ48 92 aaKnown RBP0.71□□□□□ -2.3
BRCA1-202ENST00000354071 C22orf24Q9Y442 160 aa0.71□□□□□ -2.3
BRCA1-202ENST00000354071 KRTAP26-1Q6PEX3 210 aa0.71□□□□□ -2.3
BRCA1-202ENST00000354071 A0A0D9SG42 100 aa0.7□□□□□ -2.3
BRCA1-202ENST00000354071 M0R2N4 97 aa0.7□□□□□ -2.3
BRCA1-202ENST00000354071 C10orf99Q6UWK7 81 aa0.7□□□□□ -2.3
BRCA1-202ENST00000354071 Q6ZRX8 168 aa0.7□□□□□ -2.3
BRCA1-202ENST00000354071 CR1P17927 2039 aa0.7□□□□□ -2.3
BRCA1-202ENST00000354071 LINC01558Q9Y6Z2 57 aa0.7□□□□□ -2.3
BRCA1-202ENST00000354071 HELZP42694 1942 aaKnown RBP0.7□□□□□ -2.3
BRCA1-202ENST00000354071 SPINK7P58062 85 aa0.7□□□□□ -2.3
BRCA1-202ENST00000354071 Q96NJ1 140 aa0.7□□□□□ -2.3
BRCA1-202ENST00000354071 IGLV5-48A0A075B6I7 105 aa0.7□□□□□ -2.3
BRCA1-202ENST00000354071 KRTAP12-3P60328 96 aa0.7□□□□□ -2.3
BRCA1-202ENST00000354071 ASB16-AS1Q495Z4 193 aa0.7□□□□□ -2.3
BRCA1-202ENST00000354071 Q5VV11 94 aa0.7□□□□□ -2.3
BRCA1-202ENST00000354071 PLXNA4Q9HCM2 1894 aa0.69□□□□□ -2.3
BRCA1-202ENST00000354071 A6NN06 94 aa0.69□□□□□ -2.3
BRCA1-202ENST00000354071 KCNQ1DNQ9H478 68 aa0.69□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms