RNA–Protein interactions for RNA: ENST00000348911.10

SBF1-201, Transcript of SET binding factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SBF1, Length 6,045 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBF1-201ENST00000348911 KRTAP23-1A1A580 65 aa6.64□□□□□ -1.35
SBF1-201ENST00000348911 KRTAP4-5Q9BYR2 181 aa6.64□□□□□ -1.35
SBF1-201ENST00000348911 DNAH1Q9P2D7 4330 aa6.6□□□□□ -1.35
SBF1-201ENST00000348911 ZNF469Q96JG9 3925 aaPredicted RBP6.59□□□□□ -1.35
SBF1-201ENST00000348911 LCE3AQ5TA76 89 aa6.58□□□□□ -1.36
SBF1-201ENST00000348911 KRTAP12-3P60328 96 aa6.57□□□□□ -1.36
SBF1-201ENST00000348911 DNAH5Q8TE73 4624 aa6.51□□□□□ -1.37
SBF1-201ENST00000348911 PLECQ15149 4684 aaKnown RBP6.49□□□□□ -1.37
SBF1-201ENST00000348911 DNAH10Q8IVF4 4471 aa6.47□□□□□ -1.37
SBF1-201ENST00000348911 DNAH17Q9UFH2 4485 aa6.44□□□□□ -1.38
SBF1-201ENST00000348911 DNAH11Q96DT5 4516 aa6.4□□□□□ -1.39
SBF1-201ENST00000348911 VPS13DQ5THJ4 4388 aa6.38□□□□□ -1.39
SBF1-201ENST00000348911 DNAH2Q9P225 4427 aa6.37□□□□□ -1.39
SBF1-201ENST00000348911 DNAH3Q8TD57 4116 aa6.34□□□□□ -1.39
SBF1-201ENST00000348911 KRTAP10-5P60370 271 aa6.32□□□□□ -1.4
SBF1-201ENST00000348911 KRTAP4-1Q9BYQ7 146 aa6.27□□□□□ -1.4
SBF1-201ENST00000348911 DNAH8Q96JB1 4490 aa6.26□□□□□ -1.41
SBF1-201ENST00000348911 SACSQ9NZJ4 4579 aa6.19□□□□□ -1.42
SBF1-201ENST00000348911 STARD9Q9P2P6 4700 aa6.18□□□□□ -1.42
SBF1-201ENST00000348911 LRP1BQ9NZR2 4599 aa6.17□□□□□ -1.42
SBF1-201ENST00000348911 DYNC1H1Q14204 4646 aaKnown RBP6.17□□□□□ -1.42
SBF1-201ENST00000348911 ANK2Q01484 3957 aa6.15□□□□□ -1.42
SBF1-201ENST00000348911 DYNC2H1Q8NCM8 4307 aaKnown RBP6.14□□□□□ -1.43
SBF1-201ENST00000348911 FAT2Q9NYQ8 4349 aa6.08□□□□□ -1.44
SBF1-201ENST00000348911 DNHD1Q96M86 4753 aa6.08□□□□□ -1.44
SBF1-201ENST00000348911 FAT1Q14517 4588 aa6.08□□□□□ -1.44
SBF1-201ENST00000348911 SPRR2GQ9BYE4 73 aa6.07□□□□□ -1.44
SBF1-201ENST00000348911 MT1HP80294 61 aa6.07□□□□□ -1.44
SBF1-201ENST00000348911 MT2AP02795 61 aa6.01□□□□□ -1.45
SBF1-201ENST00000348911 KRTAP8-1Q8IUC2 63 aa6□□□□□ -1.45
SBF1-201ENST00000348911 KMT2AQ03164 3969 aa5.99□□□□□ -1.45
SBF1-201ENST00000348911 VPS13BQ7Z7G8 4022 aa5.99□□□□□ -1.45
SBF1-201ENST00000348911 FRAS1Q86XX4 4008 aa5.97□□□□□ -1.45
SBF1-201ENST00000348911 APOBP04114 4563 aaKnown RBP5.95□□□□□ -1.46
SBF1-201ENST00000348911 MT1FP04733 61 aa5.92□□□□□ -1.46
SBF1-201ENST00000348911 PRKDCP78527 4128 aaKnown RBP5.9□□□□□ -1.46
SBF1-201ENST00000348911 CMYA5Q8N3K9 4069 aa5.86□□□□□ -1.47
SBF1-201ENST00000348911 KRTAP19-5Q3LI72 72 aa5.86□□□□□ -1.47
SBF1-201ENST00000348911 RYR1P21817 5038 aa5.85□□□□□ -1.47
SBF1-201ENST00000348911 DNAH6Q9C0G6 4158 aa5.84□□□□□ -1.47
SBF1-201ENST00000348911 LCE3CQ5T5A8 94 aa5.82□□□□□ -1.48
SBF1-201ENST00000348911 DNAH7Q8WXX0 4024 aa5.82□□□□□ -1.48
SBF1-201ENST00000348911 HECTD4Q9Y4D8 3996 aa5.8□□□□□ -1.48
SBF1-201ENST00000348911 LYSTQ99698 3801 aa5.78□□□□□ -1.48
SBF1-201ENST00000348911 FAT3Q8TDW7 4589 aa5.7□□□□□ -1.5
SBF1-201ENST00000348911 MYCBP2O75592 4640 aa5.68□□□□□ -1.5
SBF1-201ENST00000348911 KRTAP17-1Q9BYP8 105 aa5.67□□□□□ -1.5
SBF1-201ENST00000348911 KRTAP19-1Q8IUB9 90 aa5.67□□□□□ -1.5
SBF1-201ENST00000348911 KRTAP10-7P60409 375 aaPredicted RBP5.65□□□□□ -1.5
SBF1-201ENST00000348911 RYR3Q15413 4870 aa5.63□□□□□ -1.51
SBF1-201ENST00000348911 KRTAP19-8Q3LI54 63 aa5.62□□□□□ -1.51
SBF1-201ENST00000348911 LRP1Q07954 4544 aaKnown RBP5.57□□□□□ -1.52
SBF1-201ENST00000348911 KRTAP19-4Q3LI73 84 aa5.57□□□□□ -1.52
SBF1-201ENST00000348911 MT1XP80297 61 aa5.54□□□□□ -1.52
SBF1-201ENST00000348911 SPRR5A0A1B0GTR4 108 aa5.54□□□□□ -1.52
SBF1-201ENST00000348911 SPRR2FQ96RM1 72 aa5.54□□□□□ -1.52
SBF1-201ENST00000348911 KIAA1109Q2LD37 5005 aa5.51□□□□□ -1.53
SBF1-201ENST00000348911 RYR2Q92736 4967 aa5.5□□□□□ -1.53
SBF1-201ENST00000348911 MT1BP07438 61 aa5.45□□□□□ -1.54
SBF1-201ENST00000348911 HYDINQ4G0P3 5121 aa5.39□□□□□ -1.55
SBF1-201ENST00000348911 KRTAP9-8Q9BYQ0 159 aa5.39□□□□□ -1.55
SBF1-201ENST00000348911 HSPG2P98160 4391 aa5.36□□□□□ -1.55
SBF1-201ENST00000348911 LCE2CQ5TA81 110 aa5.32□□□□□ -1.56
SBF1-201ENST00000348911 LRP2P98164 4655 aa5.3□□□□□ -1.56
SBF1-201ENST00000348911 LCE3BQ5TA77 95 aa5.3□□□□□ -1.56
SBF1-201ENST00000348911 PKHD1L1Q86WI1 4243 aa5.3□□□□□ -1.56
SBF1-201ENST00000348911 MT1GP13640 62 aa5.29□□□□□ -1.56
SBF1-201ENST00000348911 KRTAP4-8A0A0G2JLE6 195 aa5.28□□□□□ -1.56
SBF1-201ENST00000348911 KRTAP4-8Q9BYQ9 185 aa5.28□□□□□ -1.56
SBF1-201ENST00000348911 KRTAP12-4P60329 112 aa5.28□□□□□ -1.56
SBF1-201ENST00000348911 PKHD1P08F94 4074 aa5.27□□□□□ -1.57
SBF1-201ENST00000348911 HERC1Q15751 4861 aa5.27□□□□□ -1.57
SBF1-201ENST00000348911 PKD1P98161 4303 aa5.27□□□□□ -1.57
SBF1-201ENST00000348911 LPAP08519 4548 aa5.25□□□□□ -1.57
SBF1-201ENST00000348911 KRTAP9-3Q9BYQ3 159 aa5.25□□□□□ -1.57
SBF1-201ENST00000348911 TNXBP22105 4242 aa5.22□□□□□ -1.57
SBF1-201ENST00000348911 HERC2O95714 4834 aa5.15□□□□□ -1.59
SBF1-201ENST00000348911 SPRR2EP22531 72 aa5.13□□□□□ -1.59
SBF1-201ENST00000348911 SPRR2BP35325 72 aa5.13□□□□□ -1.59
SBF1-201ENST00000348911 SPRR2AP35326 72 aa5.13□□□□□ -1.59
SBF1-201ENST00000348911 KRTAP19-2Q3LHN2 52 aa5.13□□□□□ -1.59
SBF1-201ENST00000348911 KMT2CQ8NEZ4 4911 aaKnown RBP5.12□□□□□ -1.59
SBF1-201ENST00000348911 KRTAP4-7Q9BYR0 210 aa5.06□□□□□ -1.6
SBF1-201ENST00000348911 LCE3DQ9BYE3 92 aa5.02□□□□□ -1.61
SBF1-201ENST00000348911 MT1LQ93083 61 aa5.01□□□□□ -1.61
SBF1-201ENST00000348911 FLGP20930 4061 aaPredicted RBP5.01□□□□□ -1.61
SBF1-201ENST00000348911 MUC17Q685J3 4493 aa5□□□□□ -1.61
SBF1-201ENST00000348911 LCE2BO14633 110 aa4.98□□□□□ -1.61
SBF1-201ENST00000348911 SPRR2DP22532 72 aa4.97□□□□□ -1.61
SBF1-201ENST00000348911 LCE3EQ5T5B0 92 aa4.96□□□□□ -1.62
SBF1-201ENST00000348911 BIRC6Q9NR09 4857 aa4.95□□□□□ -1.62
SBF1-201ENST00000348911 MT1EP04732 61 aa4.95□□□□□ -1.62
SBF1-201ENST00000348911 KRTAP19-3Q7Z4W3 81 aa4.95□□□□□ -1.62
SBF1-201ENST00000348911 PCLOQ9Y6V0 5065 aa4.94□□□□□ -1.62
SBF1-201ENST00000348911 LOC100996750A0A140TA64 210 aa4.77□□□□□ -1.65
SBF1-201ENST00000348911 MT1MQ8N339 61 aa4.77□□□□□ -1.65
SBF1-201ENST00000348911 EPPK1P58107 5090 aaKnown RBP4.76□□□□□ -1.65
SBF1-201ENST00000348911 ABCA13Q86UQ4 5058 aa4.7□□□□□ -1.66
SBF1-201ENST00000348911 KRTAP4-3Q9BYR4 195 aa4.7□□□□□ -1.66
SBF1-201ENST00000348911 PRM1P04553 51 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms