RNA–Protein interactions for RNA: ENST00000341329.7

RHBDD1-201, Transcript of rhomboid domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHBDD1, Length 4,883 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD1-201ENST00000341329 VPS13DQ5THJ4 4388 aa5.21□□□□□ -1.58
RHBDD1-201ENST00000341329 ZNF469Q96JG9 3925 aaPredicted RBP5.2□□□□□ -1.58
RHBDD1-201ENST00000341329 DNAH10Q8IVF4 4471 aa5.2□□□□□ -1.58
RHBDD1-201ENST00000341329 DNAH5Q8TE73 4624 aa5.19□□□□□ -1.58
RHBDD1-201ENST00000341329 PLECQ15149 4684 aaKnown RBP5.18□□□□□ -1.58
RHBDD1-201ENST00000341329 DNAH2Q9P225 4427 aa5.17□□□□□ -1.58
RHBDD1-201ENST00000341329 KRTAP4-5Q9BYR2 181 aa5.16□□□□□ -1.58
RHBDD1-201ENST00000341329 LORP23490 312 aaPredicted RBP5.15□□□□□ -1.59
RHBDD1-201ENST00000341329 DNAH11Q96DT5 4516 aa5.13□□□□□ -1.59
RHBDD1-201ENST00000341329 KRTAP12-3P60328 96 aa5.12□□□□□ -1.59
RHBDD1-201ENST00000341329 DNAH3Q8TD57 4116 aa5.08□□□□□ -1.6
RHBDD1-201ENST00000341329 LCE3AQ5TA76 89 aa5.07□□□□□ -1.6
RHBDD1-201ENST00000341329 CSMD3Q7Z407 3707 aa5.04□□□□□ -1.6
RHBDD1-201ENST00000341329 DYNC2H1Q8NCM8 4307 aaKnown RBP5□□□□□ -1.61
RHBDD1-201ENST00000341329 DNAH8Q96JB1 4490 aa4.99□□□□□ -1.61
RHBDD1-201ENST00000341329 SACSQ9NZJ4 4579 aa4.99□□□□□ -1.61
RHBDD1-201ENST00000341329 DYNC1H1Q14204 4646 aaKnown RBP4.96□□□□□ -1.61
RHBDD1-201ENST00000341329 KRTAP4-1Q9BYQ7 146 aa4.95□□□□□ -1.62
RHBDD1-201ENST00000341329 SPRR2GQ9BYE4 73 aa4.95□□□□□ -1.62
RHBDD1-201ENST00000341329 STARD9Q9P2P6 4700 aa4.94□□□□□ -1.62
RHBDD1-201ENST00000341329 LRP1BQ9NZR2 4599 aa4.93□□□□□ -1.62
RHBDD1-201ENST00000341329 FAT2Q9NYQ8 4349 aa4.87□□□□□ -1.63
RHBDD1-201ENST00000341329 DNAH6Q9C0G6 4158 aa4.84□□□□□ -1.63
RHBDD1-201ENST00000341329 ANK2Q01484 3957 aa4.83□□□□□ -1.64
RHBDD1-201ENST00000341329 MT1HP80294 61 aa4.82□□□□□ -1.64
RHBDD1-201ENST00000341329 FAT1Q14517 4588 aa4.81□□□□□ -1.64
RHBDD1-201ENST00000341329 MT2AP02795 61 aa4.79□□□□□ -1.64
RHBDD1-201ENST00000341329 DNHD1Q96M86 4753 aa4.77□□□□□ -1.65
RHBDD1-201ENST00000341329 KRTAP19-4Q3LI73 84 aa4.76□□□□□ -1.65
RHBDD1-201ENST00000341329 KRTAP8-1Q8IUC2 63 aa4.75□□□□□ -1.65
RHBDD1-201ENST00000341329 VPS13BQ7Z7G8 4022 aa4.72□□□□□ -1.65
RHBDD1-201ENST00000341329 APOBP04114 4563 aaKnown RBP4.72□□□□□ -1.65
RHBDD1-201ENST00000341329 PRKDCP78527 4128 aaKnown RBP4.72□□□□□ -1.65
RHBDD1-201ENST00000341329 KMT2AQ03164 3969 aa4.69□□□□□ -1.66
RHBDD1-201ENST00000341329 MT1FP04733 61 aa4.68□□□□□ -1.66
RHBDD1-201ENST00000341329 CMYA5Q8N3K9 4069 aa4.64□□□□□ -1.67
RHBDD1-201ENST00000341329 RYR1P21817 5038 aa4.64□□□□□ -1.67
RHBDD1-201ENST00000341329 HECTD4Q9Y4D8 3996 aa4.64□□□□□ -1.67
RHBDD1-201ENST00000341329 DNAH7Q8WXX0 4024 aa4.64□□□□□ -1.67
RHBDD1-201ENST00000341329 KRTAP19-8Q3LI54 63 aa4.63□□□□□ -1.67
RHBDD1-201ENST00000341329 CRCT1Q9UGL9 99 aa4.63□□□□□ -1.67
RHBDD1-201ENST00000341329 LYSTQ99698 3801 aa4.61□□□□□ -1.67
RHBDD1-201ENST00000341329 KRTAP19-1Q8IUB9 90 aa4.58□□□□□ -1.68
RHBDD1-201ENST00000341329 FAT3Q8TDW7 4589 aa4.58□□□□□ -1.68
RHBDD1-201ENST00000341329 LCE3CQ5T5A8 94 aa4.57□□□□□ -1.68
RHBDD1-201ENST00000341329 RYR2Q92736 4967 aa4.57□□□□□ -1.68
RHBDD1-201ENST00000341329 SPRR5A0A1B0GTR4 108 aa4.56□□□□□ -1.68
RHBDD1-201ENST00000341329 FRAS1Q86XX4 4008 aa4.54□□□□□ -1.68
RHBDD1-201ENST00000341329 KRTAP19-5Q3LI72 72 aa4.54□□□□□ -1.68
RHBDD1-201ENST00000341329 KRTAP17-1Q9BYP8 105 aa4.52□□□□□ -1.69
RHBDD1-201ENST00000341329 LCE2DQ5TA82 110 aaPredicted RBP4.51□□□□□ -1.69
RHBDD1-201ENST00000341329 MYCBP2O75592 4640 aa4.5□□□□□ -1.69
RHBDD1-201ENST00000341329 KRTAP10-5P60370 271 aa4.5□□□□□ -1.69
RHBDD1-201ENST00000341329 HSPG2P98160 4391 aa4.5□□□□□ -1.69
RHBDD1-201ENST00000341329 RYR3Q15413 4870 aa4.5□□□□□ -1.69
RHBDD1-201ENST00000341329 KIAA1109Q2LD37 5005 aa4.44□□□□□ -1.7
RHBDD1-201ENST00000341329 MT1XP80297 61 aa4.43□□□□□ -1.7
RHBDD1-201ENST00000341329 LRP1Q07954 4544 aaKnown RBP4.41□□□□□ -1.7
RHBDD1-201ENST00000341329 KRTAP10-7P60409 375 aaPredicted RBP4.39□□□□□ -1.71
RHBDD1-201ENST00000341329 MT1BP07438 61 aa4.39□□□□□ -1.71
RHBDD1-201ENST00000341329 HERC1Q15751 4861 aa4.37□□□□□ -1.71
RHBDD1-201ENST00000341329 KRTAP9-8Q9BYQ0 159 aa4.37□□□□□ -1.71
RHBDD1-201ENST00000341329 LCE2CQ5TA81 110 aa4.35□□□□□ -1.71
RHBDD1-201ENST00000341329 PKHD1L1Q86WI1 4243 aa4.32□□□□□ -1.72
RHBDD1-201ENST00000341329 KRTAP19-2Q3LHN2 52 aa4.3□□□□□ -1.72
RHBDD1-201ENST00000341329 PKD1P98161 4303 aa4.29□□□□□ -1.72
RHBDD1-201ENST00000341329 HYDINQ4G0P3 5121 aa4.27□□□□□ -1.73
RHBDD1-201ENST00000341329 KRTAP9-3Q9BYQ3 159 aa4.26□□□□□ -1.73
RHBDD1-201ENST00000341329 LRP2P98164 4655 aa4.24□□□□□ -1.73
RHBDD1-201ENST00000341329 SPRR2FQ96RM1 72 aa4.23□□□□□ -1.73
RHBDD1-201ENST00000341329 PKHD1P08F94 4074 aa4.21□□□□□ -1.74
RHBDD1-201ENST00000341329 TNXBP22105 4242 aa4.18□□□□□ -1.74
RHBDD1-201ENST00000341329 HERC2O95714 4834 aa4.17□□□□□ -1.74
RHBDD1-201ENST00000341329 MUC17Q685J3 4493 aa4.13□□□□□ -1.75
RHBDD1-201ENST00000341329 MT1GP13640 62 aa4.12□□□□□ -1.75
RHBDD1-201ENST00000341329 BIRC6Q9NR09 4857 aa4.11□□□□□ -1.75
RHBDD1-201ENST00000341329 FLGP20930 4061 aaPredicted RBP4.08□□□□□ -1.76
RHBDD1-201ENST00000341329 KMT2CQ8NEZ4 4911 aaKnown RBP4.07□□□□□ -1.76
RHBDD1-201ENST00000341329 KRTAP4-8A0A0G2JLE6 195 aa4.05□□□□□ -1.76
RHBDD1-201ENST00000341329 KRTAP4-8Q9BYQ9 185 aa4.05□□□□□ -1.76
RHBDD1-201ENST00000341329 KRTAP12-4P60329 112 aa4.04□□□□□ -1.76
RHBDD1-201ENST00000341329 MT1LQ93083 61 aa4.02□□□□□ -1.77
RHBDD1-201ENST00000341329 LPAP08519 4548 aa4□□□□□ -1.77
RHBDD1-201ENST00000341329 LCE2BO14633 110 aa3.98□□□□□ -1.77
RHBDD1-201ENST00000341329 MT1EP04732 61 aa3.97□□□□□ -1.77
RHBDD1-201ENST00000341329 LCE3BQ5TA77 95 aa3.96□□□□□ -1.78
RHBDD1-201ENST00000341329 PCLOQ9Y6V0 5065 aa3.95□□□□□ -1.78
RHBDD1-201ENST00000341329 KRTAP19-3Q7Z4W3 81 aa3.95□□□□□ -1.78
RHBDD1-201ENST00000341329 SPRR2EP22531 72 aa3.92□□□□□ -1.78
RHBDD1-201ENST00000341329 SPRR2BP35325 72 aa3.92□□□□□ -1.78
RHBDD1-201ENST00000341329 SPRR2AP35326 72 aa3.92□□□□□ -1.78
RHBDD1-201ENST00000341329 LCE3DQ9BYE3 92 aa3.89□□□□□ -1.79
RHBDD1-201ENST00000341329 LCE3EQ5T5B0 92 aa3.87□□□□□ -1.79
RHBDD1-201ENST00000341329 KRTAP19-6Q3LI70 58 aa3.84□□□□□ -1.8
RHBDD1-201ENST00000341329 KRTAP4-7Q9BYR0 210 aa3.82□□□□□ -1.8
RHBDD1-201ENST00000341329 SPRR2DP22532 72 aa3.8□□□□□ -1.8
RHBDD1-201ENST00000341329 MT1MQ8N339 61 aa3.8□□□□□ -1.8
RHBDD1-201ENST00000341329 ABCA13Q86UQ4 5058 aa3.79□□□□□ -1.8
RHBDD1-201ENST00000341329 KRTAP19-7Q3SYF9 63 aa3.76□□□□□ -1.81
RHBDD1-201ENST00000341329 KRTAP2-3P0C7H8 128 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms