RNA–Protein interactions for RNA: ENST00000333039.2

NPTXR-201, Transcript of neuronal pentraxin receptor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPTXR, Length 5,784 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPTXR-201ENST00000333039 VPS13CQ709C8 3753 aa9.25□□□□□ -0.93
NPTXR-201ENST00000333039 DNAH9Q9NYC9 4486 aa9.17□□□□□ -0.94
NPTXR-201ENST00000333039 AKAP9Q99996 3911 aa9.04□□□□□ -0.96
NPTXR-201ENST00000333039 DNAH5Q8TE73 4624 aa9.04□□□□□ -0.96
NPTXR-201ENST00000333039 DNAH1Q9P2D7 4330 aa9.03□□□□□ -0.96
NPTXR-201ENST00000333039 KRTAP8-1Q8IUC2 63 aa8.96□□□□□ -0.97
NPTXR-201ENST00000333039 DNAH10Q8IVF4 4471 aa8.94□□□□□ -0.98
NPTXR-201ENST00000333039 DNAH2Q9P225 4427 aa8.93□□□□□ -0.98
NPTXR-201ENST00000333039 KRTAP4-1Q9BYQ7 146 aa8.92□□□□□ -0.98
NPTXR-201ENST00000333039 CSMD3Q7Z407 3707 aa8.9□□□□□ -0.98
NPTXR-201ENST00000333039 KRTAP10-5P60370 271 aa8.86□□□□□ -0.99
NPTXR-201ENST00000333039 PLECQ15149 4684 aaKnown RBP8.83□□□□□ -1
NPTXR-201ENST00000333039 MT1HP80294 61 aa8.82□□□□□ -1
NPTXR-201ENST00000333039 DNAH17Q9UFH2 4485 aa8.79□□□□□ -1
NPTXR-201ENST00000333039 DNAH11Q96DT5 4516 aa8.78□□□□□ -1
NPTXR-201ENST00000333039 VPS13DQ5THJ4 4388 aa8.72□□□□□ -1.01
NPTXR-201ENST00000333039 MT2AP02795 61 aa8.69□□□□□ -1.02
NPTXR-201ENST00000333039 ZNF469Q96JG9 3925 aaPredicted RBP8.66□□□□□ -1.02
NPTXR-201ENST00000333039 SPRR2GQ9BYE4 73 aa8.65□□□□□ -1.02
NPTXR-201ENST00000333039 DNAH3Q8TD57 4116 aa8.64□□□□□ -1.03
NPTXR-201ENST00000333039 DYNC1H1Q14204 4646 aaKnown RBP8.54□□□□□ -1.04
NPTXR-201ENST00000333039 MT1FP04733 61 aa8.51□□□□□ -1.05
NPTXR-201ENST00000333039 LRP1BQ9NZR2 4599 aa8.5□□□□□ -1.05
NPTXR-201ENST00000333039 SACSQ9NZJ4 4579 aa8.5□□□□□ -1.05
NPTXR-201ENST00000333039 FAT2Q9NYQ8 4349 aa8.49□□□□□ -1.05
NPTXR-201ENST00000333039 DYNC2H1Q8NCM8 4307 aaKnown RBP8.46□□□□□ -1.05
NPTXR-201ENST00000333039 DNAH8Q96JB1 4490 aa8.44□□□□□ -1.06
NPTXR-201ENST00000333039 KRTAP19-5Q3LI72 72 aa8.43□□□□□ -1.06
NPTXR-201ENST00000333039 STARD9Q9P2P6 4700 aa8.41□□□□□ -1.06
NPTXR-201ENST00000333039 FAT1Q14517 4588 aa8.34□□□□□ -1.07
NPTXR-201ENST00000333039 LCE3CQ5T5A8 94 aa8.31□□□□□ -1.08
NPTXR-201ENST00000333039 SPRR2FQ96RM1 72 aa8.3□□□□□ -1.08
NPTXR-201ENST00000333039 ANK2Q01484 3957 aa8.3□□□□□ -1.08
NPTXR-201ENST00000333039 DNHD1Q96M86 4753 aa8.27□□□□□ -1.09
NPTXR-201ENST00000333039 KRTAP10-7P60409 375 aaPredicted RBP8.26□□□□□ -1.09
NPTXR-201ENST00000333039 RYR1P21817 5038 aa8.18□□□□□ -1.1
NPTXR-201ENST00000333039 APOBP04114 4563 aaKnown RBP8.17□□□□□ -1.1
NPTXR-201ENST00000333039 PRKDCP78527 4128 aaKnown RBP8.13□□□□□ -1.11
NPTXR-201ENST00000333039 DNAH6Q9C0G6 4158 aa8.1□□□□□ -1.11
NPTXR-201ENST00000333039 VPS13BQ7Z7G8 4022 aa8.1□□□□□ -1.11
NPTXR-201ENST00000333039 DNAH7Q8WXX0 4024 aa8.08□□□□□ -1.12
NPTXR-201ENST00000333039 KMT2AQ03164 3969 aa8.07□□□□□ -1.12
NPTXR-201ENST00000333039 KRTAP19-4Q3LI73 84 aa8.04□□□□□ -1.12
NPTXR-201ENST00000333039 CMYA5Q8N3K9 4069 aa8.01□□□□□ -1.13
NPTXR-201ENST00000333039 KRTAP19-8Q3LI54 63 aa7.99□□□□□ -1.13
NPTXR-201ENST00000333039 KRTAP19-1Q8IUB9 90 aa7.96□□□□□ -1.13
NPTXR-201ENST00000333039 RYR3Q15413 4870 aa7.94□□□□□ -1.14
NPTXR-201ENST00000333039 KRTAP17-1Q9BYP8 105 aa7.92□□□□□ -1.14
NPTXR-201ENST00000333039 FRAS1Q86XX4 4008 aa7.9□□□□□ -1.15
NPTXR-201ENST00000333039 FAT3Q8TDW7 4589 aa7.89□□□□□ -1.15
NPTXR-201ENST00000333039 MT1XP80297 61 aa7.85□□□□□ -1.15
NPTXR-201ENST00000333039 SPRR2EP22531 72 aa7.8□□□□□ -1.16
NPTXR-201ENST00000333039 SPRR2BP35325 72 aa7.8□□□□□ -1.16
NPTXR-201ENST00000333039 SPRR2AP35326 72 aa7.8□□□□□ -1.16
NPTXR-201ENST00000333039 LYSTQ99698 3801 aa7.78□□□□□ -1.16
NPTXR-201ENST00000333039 MT1BP07438 61 aa7.73□□□□□ -1.17
NPTXR-201ENST00000333039 HECTD4Q9Y4D8 3996 aa7.73□□□□□ -1.17
NPTXR-201ENST00000333039 LRP1Q07954 4544 aaKnown RBP7.71□□□□□ -1.17
NPTXR-201ENST00000333039 LCE3BQ5TA77 95 aa7.71□□□□□ -1.17
NPTXR-201ENST00000333039 MT1GP13640 62 aa7.67□□□□□ -1.18
NPTXR-201ENST00000333039 KRTAP9-8Q9BYQ0 159 aa7.66□□□□□ -1.18
NPTXR-201ENST00000333039 RYR2Q92736 4967 aa7.66□□□□□ -1.18
NPTXR-201ENST00000333039 HERC1Q15751 4861 aa7.65□□□□□ -1.18
NPTXR-201ENST00000333039 MYCBP2O75592 4640 aa7.61□□□□□ -1.19
NPTXR-201ENST00000333039 HSPG2P98160 4391 aa7.56□□□□□ -1.2
NPTXR-201ENST00000333039 SPRR2DP22532 72 aa7.55□□□□□ -1.2
NPTXR-201ENST00000333039 KRTAP4-8A0A0G2JLE6 195 aa7.54□□□□□ -1.2
NPTXR-201ENST00000333039 KRTAP4-8Q9BYQ9 185 aa7.54□□□□□ -1.2
NPTXR-201ENST00000333039 KRTAP9-3Q9BYQ3 159 aa7.51□□□□□ -1.21
NPTXR-201ENST00000333039 LCE2BO14633 110 aa7.5□□□□□ -1.21
NPTXR-201ENST00000333039 KRTAP12-4P60329 112 aa7.5□□□□□ -1.21
NPTXR-201ENST00000333039 LCE2CQ5TA81 110 aa7.49□□□□□ -1.21
NPTXR-201ENST00000333039 SPRR5A0A1B0GTR4 108 aa7.46□□□□□ -1.21
NPTXR-201ENST00000333039 KIAA1109Q2LD37 5005 aa7.44□□□□□ -1.22
NPTXR-201ENST00000333039 PKHD1L1Q86WI1 4243 aa7.35□□□□□ -1.23
NPTXR-201ENST00000333039 PKD1P98161 4303 aa7.35□□□□□ -1.23
NPTXR-201ENST00000333039 LCE3DQ9BYE3 92 aa7.26□□□□□ -1.25
NPTXR-201ENST00000333039 HYDINQ4G0P3 5121 aa7.23□□□□□ -1.25
NPTXR-201ENST00000333039 KRTAP19-3Q7Z4W3 81 aa7.18□□□□□ -1.26
NPTXR-201ENST00000333039 LPAP08519 4548 aa7.18□□□□□ -1.26
NPTXR-201ENST00000333039 HERC2O95714 4834 aa7.16□□□□□ -1.26
NPTXR-201ENST00000333039 BIRC6Q9NR09 4857 aa7.15□□□□□ -1.27
NPTXR-201ENST00000333039 LCE3EQ5T5B0 92 aa7.14□□□□□ -1.27
NPTXR-201ENST00000333039 KRTAP4-7Q9BYR0 210 aa7.14□□□□□ -1.27
NPTXR-201ENST00000333039 MT1LQ93083 61 aa7.14□□□□□ -1.27
NPTXR-201ENST00000333039 LRP2P98164 4655 aa7.11□□□□□ -1.27
NPTXR-201ENST00000333039 KRTAP19-2Q3LHN2 52 aa7.09□□□□□ -1.27
NPTXR-201ENST00000333039 TNXBP22105 4242 aa7.08□□□□□ -1.28
NPTXR-201ENST00000333039 MT1EP04732 61 aa7.07□□□□□ -1.28
NPTXR-201ENST00000333039 PKHD1P08F94 4074 aa7.01□□□□□ -1.29
NPTXR-201ENST00000333039 PCLOQ9Y6V0 5065 aa7.01□□□□□ -1.29
NPTXR-201ENST00000333039 MUC17Q685J3 4493 aa6.93□□□□□ -1.3
NPTXR-201ENST00000333039 FLGP20930 4061 aaPredicted RBP6.88□□□□□ -1.31
NPTXR-201ENST00000333039 LCE2DQ5TA82 110 aaPredicted RBP6.87□□□□□ -1.31
NPTXR-201ENST00000333039 MT1MQ8N339 61 aa6.86□□□□□ -1.31
NPTXR-201ENST00000333039 KMT2CQ8NEZ4 4911 aaKnown RBP6.85□□□□□ -1.31
NPTXR-201ENST00000333039 KRTAP19-6Q3LI70 58 aa6.77□□□□□ -1.33
NPTXR-201ENST00000333039 LOC100996750A0A140TA64 210 aa6.76□□□□□ -1.33
NPTXR-201ENST00000333039 MT3P25713 68 aa6.73□□□□□ -1.33
NPTXR-201ENST00000333039 MT4P47944 62 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms