RNA–Protein interactions for RNA: ENST00000328495.9

CCDC144A-201, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 2

Gene CCDC144A, Length 3,375 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-201ENST00000328495 COX7B2Q8TF08 81 aa0.21□□□□□ -2.38
CCDC144A-201ENST00000328495 NINQ8N4C6 2090 aa0.2□□□□□ -2.38
CCDC144A-201ENST00000328495 CTXND1A0A1B0GTU2 59 aa0.2□□□□□ -2.38
CCDC144A-201ENST00000328495 ARPC5O15511 151 aa0.2□□□□□ -2.38
CCDC144A-201ENST00000328495 CCL3L1P16619 93 aa0.2□□□□□ -2.38
CCDC144A-201ENST00000328495 PLGLAQ15195 96 aa0.2□□□□□ -2.38
CCDC144A-201ENST00000328495 DEFB112Q30KQ8 113 aa0.2□□□□□ -2.38
CCDC144A-201ENST00000328495 LINC01590Q5TEZ4 76 aa0.2□□□□□ -2.38
CCDC144A-201ENST00000328495 MYO7BQ6PIF6 2116 aa0.2□□□□□ -2.38
CCDC144A-201ENST00000328495 C5orf56Q8N8D9 126 aa0.2□□□□□ -2.38
CCDC144A-201ENST00000328495 M0R135 149 aa0.2□□□□□ -2.38
CCDC144A-201ENST00000328495 APOC2P02655 101 aa0.2□□□□□ -2.38
CCDC144A-201ENST00000328495 CKS1BP61024 79 aa0.2□□□□□ -2.38
CCDC144A-201ENST00000328495 ZNF720Q7Z2F6 126 aa0.2□□□□□ -2.38
CCDC144A-201ENST00000328495 SPRR2GQ9BYE4 73 aa0.2□□□□□ -2.38
CCDC144A-201ENST00000328495 FXYD6Q9H0Q3 95 aa0.2□□□□□ -2.38
CCDC144A-201ENST00000328495 A0A0D9SG42 100 aa0.2□□□□□ -2.38
CCDC144A-201ENST00000328495 SPINK8P0C7L1 97 aa0.2□□□□□ -2.38
CCDC144A-201ENST00000328495 ATXN8Q156A1 80 aa0.2□□□□□ -2.38
CCDC144A-201ENST00000328495 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.2□□□□□ -2.38
CCDC144A-201ENST00000328495 FAUP35544 74 aaKnown RBP0.19□□□□□ -2.38
CCDC144A-201ENST00000328495 Q8IZM0 81 aa0.19□□□□□ -2.38
CCDC144A-201ENST00000328495 UNC13CQ8NB66 2214 aa0.19□□□□□ -2.38
CCDC144A-201ENST00000328495 SMIM11BQ8TCY0 68 aa0.19□□□□□ -2.38
CCDC144A-201ENST00000328495 S100A16Q96FQ6 103 aaKnown RBP0.19□□□□□ -2.38
CCDC144A-201ENST00000328495 USMG5Q96IX5 58 aa0.19□□□□□ -2.38
CCDC144A-201ENST00000328495 PRO1854Q9UHT4 67 aa0.19□□□□□ -2.38
CCDC144A-201ENST00000328495 C7orf77A4D0Y5 90 aa0.19□□□□□ -2.38
CCDC144A-201ENST00000328495 FAM223BA6NKX1 122 aa0.19□□□□□ -2.38
CCDC144A-201ENST00000328495 AKAIN1P0CW23 69 aa0.19□□□□□ -2.38
CCDC144A-201ENST00000328495 NPC2P61916 151 aa0.19□□□□□ -2.38
CCDC144A-201ENST00000328495 LINC00208Q96KT6 92 aa0.19□□□□□ -2.38
CCDC144A-201ENST00000328495 FAM24AA6NFZ4 105 aa0.19□□□□□ -2.38
CCDC144A-201ENST00000328495 M0QZ58 72 aa0.19□□□□□ -2.38
CCDC144A-201ENST00000328495 ACYP2P14621 99 aa0.19□□□□□ -2.38
CCDC144A-201ENST00000328495 COX14Q96I36 57 aa0.19□□□□□ -2.38
CCDC144A-201ENST00000328495 M0R2Z0 102 aa0.18□□□□□ -2.38
CCDC144A-201ENST00000328495 SNCGO76070 127 aa0.18□□□□□ -2.38
CCDC144A-201ENST00000328495 NDUFA4L2Q9NRX3 87 aa0.18□□□□□ -2.38
CCDC144A-201ENST00000328495 A0A1B0GWA3 101 aa0.18□□□□□ -2.38
CCDC144A-201ENST00000328495 F8VRH5 84 aa0.18□□□□□ -2.38
CCDC144A-201ENST00000328495 SFTA3P0C7M3 94 aa0.18□□□□□ -2.38
CCDC144A-201ENST00000328495 SMIM13P0DJ93 91 aa0.18□□□□□ -2.38
CCDC144A-201ENST00000328495 CSAG1Q6PB30 78 aa0.18□□□□□ -2.38
CCDC144A-201ENST00000328495 KRTAP19-3Q7Z4W3 81 aa0.18□□□□□ -2.38
CCDC144A-201ENST00000328495 SPTSSAQ969W0 71 aa0.18□□□□□ -2.38
CCDC144A-201ENST00000328495 FAM103A1Q9BTL3 118 aaKnown RBP0.18□□□□□ -2.38
CCDC144A-201ENST00000328495 VAMP8Q9BV40 100 aa0.18□□□□□ -2.38
CCDC144A-201ENST00000328495 SYNE1Q8NF91 8797 aaKnown RBP0.17□□□□□ -2.38
CCDC144A-201ENST00000328495 TRAV21A0A0B4J279 112 aa0.17□□□□□ -2.38
CCDC144A-201ENST00000328495 APOC3P02656 99 aa0.17□□□□□ -2.38
CCDC144A-201ENST00000328495 ARMS2P0C7Q2 107 aa0.17□□□□□ -2.38
CCDC144A-201ENST00000328495 COX7BP24311 80 aa0.17□□□□□ -2.38
CCDC144A-201ENST00000328495 HRCT1Q6UXD1 115 aa0.17□□□□□ -2.38
CCDC144A-201ENST00000328495 TMEM167AQ8TBQ9 72 aa0.17□□□□□ -2.38
CCDC144A-201ENST00000328495 MT1LQ93083 61 aa0.17□□□□□ -2.38
CCDC144A-201ENST00000328495 NBDYA0A0U1RRE5 68 aa0.17□□□□□ -2.38
CCDC144A-201ENST00000328495 UBE2DNLQ8IWF7 75 aa0.17□□□□□ -2.38
CCDC144A-201ENST00000328495 SPCS1Q9Y6A9 102 aa0.17□□□□□ -2.38
CCDC144A-201ENST00000328495 C3orf79P0CE67 100 aa0.17□□□□□ -2.38
CCDC144A-201ENST00000328495 R4GMQ9 66 aa0.17□□□□□ -2.38
CCDC144A-201ENST00000328495 A0A1B0GV90 55 aa0.16□□□□□ -2.38
CCDC144A-201ENST00000328495 H0Y9P7 68 aa0.16□□□□□ -2.38
CCDC144A-201ENST00000328495 CD52P31358 61 aa0.16□□□□□ -2.38
CCDC144A-201ENST00000328495 PRCDQ00LT1 54 aa0.16□□□□□ -2.38
CCDC144A-201ENST00000328495 MT1MQ8N339 61 aa0.16□□□□□ -2.38
CCDC144A-201ENST00000328495 MMP24-AS1A0A0U1RRL7 71 aa0.16□□□□□ -2.38
CCDC144A-201ENST00000328495 MGPP08493 103 aa0.16□□□□□ -2.38
CCDC144A-201ENST00000328495 DEFB136Q30KP8 78 aa0.16□□□□□ -2.38
CCDC144A-201ENST00000328495 SPTBP11277 2137 aa0.16□□□□□ -2.38
CCDC144A-201ENST00000328495 ETDCA0A1B0GVM5 59 aa0.15□□□□□ -2.38
CCDC144A-201ENST00000328495 PRH1P02810 166 aa0.15□□□□□ -2.38
CCDC144A-201ENST00000328495 M0R1W7 72 aa0.15□□□□□ -2.39
CCDC144A-201ENST00000328495 GNGT1P63211 74 aa0.15□□□□□ -2.39
CCDC144A-201ENST00000328495 SPINK4O60575 86 aa0.15□□□□□ -2.39
CCDC144A-201ENST00000328495 MINOS1Q5TGZ0 78 aa0.15□□□□□ -2.39
CCDC144A-201ENST00000328495 C20orf197Q8N268 126 aa0.15□□□□□ -2.39
CCDC144A-201ENST00000328495 SPTSSBQ8NFR3 76 aa0.15□□□□□ -2.39
CCDC144A-201ENST00000328495 MT-ATP8P03928 68 aa0.14□□□□□ -2.39
CCDC144A-201ENST00000328495 ETDBQ3ZM63 59 aa0.14□□□□□ -2.39
CCDC144A-201ENST00000328495 UBL5Q9BZL1 73 aa0.14□□□□□ -2.39
CCDC144A-201ENST00000328495 SMIM3Q9BZL3 60 aa0.14□□□□□ -2.39
CCDC144A-201ENST00000328495 NOP10Q9NPE3 64 aaKnown RBP0.14□□□□□ -2.39
CCDC144A-201ENST00000328495 G3V318 75 aa0.14□□□□□ -2.39
CCDC144A-201ENST00000328495 M0R3E3 92 aa0.14□□□□□ -2.39
CCDC144A-201ENST00000328495 PIGYQ3MUY2 71 aa0.14□□□□□ -2.39
CCDC144A-201ENST00000328495 MT1XP80297 61 aa0.14□□□□□ -2.39
CCDC144A-201ENST00000328495 ADIRFQ15847 76 aa0.14□□□□□ -2.39
CCDC144A-201ENST00000328495 CLPSL2Q6UWE3 100 aa0.14□□□□□ -2.39
CCDC144A-201ENST00000328495 MRPL34Q9BQ48 92 aaKnown RBP0.14□□□□□ -2.39
CCDC144A-201ENST00000328495 NDUFA12Q9UI09 145 aa0.14□□□□□ -2.39
CCDC144A-201ENST00000328495 PRO0255Q9UI72 69 aa0.14□□□□□ -2.39
CCDC144A-201ENST00000328495 RPS27P42677 84 aaKnown RBP0.13□□□□□ -2.39
CCDC144A-201ENST00000328495 MEIG1Q5JSS6 88 aa0.13□□□□□ -2.39
CCDC144A-201ENST00000328495 NCBP2-AS2Q69YL0 99 aa0.13□□□□□ -2.39
CCDC144A-201ENST00000328495 RPS27LQ71UM5 84 aaKnown RBP0.13□□□□□ -2.39
CCDC144A-201ENST00000328495 SSBP3-AS1Q7Z2R9 100 aa0.13□□□□□ -2.39
CCDC144A-201ENST00000328495 M0QY20 66 aa0.13□□□□□ -2.39
CCDC144A-201ENST00000328495 HMGN4O00479 90 aa0.13□□□□□ -2.39
CCDC144A-201ENST00000328495 CATR1Q13166 79 aa0.13□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms