RNA–Protein interactions for RNA: ENST00000323871.9

PXN-203, Transcript of paxillin, humanhuman

TSL 2

Gene PXN, Length 5,457 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PXN-203ENST00000323871 TRRAPQ9Y4A5 3859 aa7.25□□□□□ -1.25
PXN-203ENST00000323871 DNAH2Q9P225 4427 aa7.24□□□□□ -1.25
PXN-203ENST00000323871 DNAH9Q9NYC9 4486 aa7.23□□□□□ -1.25
PXN-203ENST00000323871 KRTAP4-1Q9BYQ7 146 aa7.21□□□□□ -1.26
PXN-203ENST00000323871 DNAH10Q8IVF4 4471 aa7.2□□□□□ -1.26
PXN-203ENST00000323871 SPENQ96T58 3664 aaKnown RBP7.2□□□□□ -1.26
PXN-203ENST00000323871 MT2AP02795 61 aa7.18□□□□□ -1.26
PXN-203ENST00000323871 DNAH11Q96DT5 4516 aa7.18□□□□□ -1.26
PXN-203ENST00000323871 CSMD2Q7Z408 3487 aa7.17□□□□□ -1.26
PXN-203ENST00000323871 DNAH5Q8TE73 4624 aa7.16□□□□□ -1.26
PXN-203ENST00000323871 SPRR2GQ9BYE4 73 aa7.13□□□□□ -1.27
PXN-203ENST00000323871 BSNQ9UPA5 3926 aa7.13□□□□□ -1.27
PXN-203ENST00000323871 KRTAP10-5P60370 271 aa7.12□□□□□ -1.27
PXN-203ENST00000323871 PLECQ15149 4684 aaKnown RBP7.01□□□□□ -1.29
PXN-203ENST00000323871 MT1FP04733 61 aa6.97□□□□□ -1.29
PXN-203ENST00000323871 KRTAP10-7P60409 375 aaPredicted RBP6.96□□□□□ -1.29
PXN-203ENST00000323871 SPRR2FQ96RM1 72 aa6.96□□□□□ -1.3
PXN-203ENST00000323871 KRTAP19-4Q3LI73 84 aa6.93□□□□□ -1.3
PXN-203ENST00000323871 DNAH17Q9UFH2 4485 aa6.89□□□□□ -1.31
PXN-203ENST00000323871 DYNC1H1Q14204 4646 aaKnown RBP6.87□□□□□ -1.31
PXN-203ENST00000323871 VPS13DQ5THJ4 4388 aa6.87□□□□□ -1.31
PXN-203ENST00000323871 KRTAP19-5Q3LI72 72 aa6.81□□□□□ -1.32
PXN-203ENST00000323871 VPS13CQ709C8 3753 aa6.77□□□□□ -1.33
PXN-203ENST00000323871 FAT2Q9NYQ8 4349 aa6.75□□□□□ -1.33
PXN-203ENST00000323871 LCE3CQ5T5A8 94 aa6.71□□□□□ -1.34
PXN-203ENST00000323871 DYNC2H1Q8NCM8 4307 aaKnown RBP6.71□□□□□ -1.34
PXN-203ENST00000323871 SACSQ9NZJ4 4579 aa6.7□□□□□ -1.34
PXN-203ENST00000323871 AKAP9Q99996 3911 aa6.69□□□□□ -1.34
PXN-203ENST00000323871 LRP1BQ9NZR2 4599 aa6.68□□□□□ -1.34
PXN-203ENST00000323871 KRTAP19-8Q3LI54 63 aa6.65□□□□□ -1.35
PXN-203ENST00000323871 DNAH3Q8TD57 4116 aa6.63□□□□□ -1.35
PXN-203ENST00000323871 CSMD3Q7Z407 3707 aa6.63□□□□□ -1.35
PXN-203ENST00000323871 SPRR2EP22531 72 aa6.63□□□□□ -1.35
PXN-203ENST00000323871 SPRR2BP35325 72 aa6.63□□□□□ -1.35
PXN-203ENST00000323871 SPRR2AP35326 72 aa6.63□□□□□ -1.35
PXN-203ENST00000323871 DNHD1Q96M86 4753 aa6.62□□□□□ -1.35
PXN-203ENST00000323871 ZNF469Q96JG9 3925 aaPredicted RBP6.57□□□□□ -1.36
PXN-203ENST00000323871 HERC1Q15751 4861 aa6.57□□□□□ -1.36
PXN-203ENST00000323871 FAT1Q14517 4588 aa6.57□□□□□ -1.36
PXN-203ENST00000323871 RYR1P21817 5038 aa6.55□□□□□ -1.36
PXN-203ENST00000323871 DNAH8Q96JB1 4490 aa6.54□□□□□ -1.36
PXN-203ENST00000323871 DNAH6Q9C0G6 4158 aa6.51□□□□□ -1.37
PXN-203ENST00000323871 KRTAP19-1Q8IUB9 90 aa6.46□□□□□ -1.38
PXN-203ENST00000323871 SPRR2DP22532 72 aa6.45□□□□□ -1.38
PXN-203ENST00000323871 STARD9Q9P2P6 4700 aa6.44□□□□□ -1.38
PXN-203ENST00000323871 RYR3Q15413 4870 aa6.4□□□□□ -1.38
PXN-203ENST00000323871 LCE2BO14633 110 aa6.38□□□□□ -1.39
PXN-203ENST00000323871 LRP1Q07954 4544 aaKnown RBP6.38□□□□□ -1.39
PXN-203ENST00000323871 APOBP04114 4563 aaKnown RBP6.38□□□□□ -1.39
PXN-203ENST00000323871 FAT3Q8TDW7 4589 aa6.36□□□□□ -1.39
PXN-203ENST00000323871 MT1XP80297 61 aa6.36□□□□□ -1.39
PXN-203ENST00000323871 HSPG2P98160 4391 aa6.36□□□□□ -1.39
PXN-203ENST00000323871 KRTAP17-1Q9BYP8 105 aa6.33□□□□□ -1.4
PXN-203ENST00000323871 PRKDCP78527 4128 aaKnown RBP6.31□□□□□ -1.4
PXN-203ENST00000323871 ANK2Q01484 3957 aa6.31□□□□□ -1.4
PXN-203ENST00000323871 MT1BP07438 61 aa6.31□□□□□ -1.4
PXN-203ENST00000323871 KRTAP9-8Q9BYQ0 159 aa6.31□□□□□ -1.4
PXN-203ENST00000323871 DNAH7Q8WXX0 4024 aa6.3□□□□□ -1.4
PXN-203ENST00000323871 KRTAP12-4P60329 112 aa6.29□□□□□ -1.4
PXN-203ENST00000323871 SPRR5A0A1B0GTR4 108 aa6.28□□□□□ -1.4
PXN-203ENST00000323871 RYR2Q92736 4967 aa6.27□□□□□ -1.41
PXN-203ENST00000323871 MT1GP13640 62 aa6.26□□□□□ -1.41
PXN-203ENST00000323871 CMYA5Q8N3K9 4069 aa6.22□□□□□ -1.41
PXN-203ENST00000323871 KRTAP9-3Q9BYQ3 159 aa6.22□□□□□ -1.41
PXN-203ENST00000323871 LCE3BQ5TA77 95 aa6.18□□□□□ -1.42
PXN-203ENST00000323871 LCE2CQ5TA81 110 aa6.15□□□□□ -1.42
PXN-203ENST00000323871 MYCBP2O75592 4640 aa6.13□□□□□ -1.43
PXN-203ENST00000323871 VPS13BQ7Z7G8 4022 aa6.12□□□□□ -1.43
PXN-203ENST00000323871 BIRC6Q9NR09 4857 aa6.09□□□□□ -1.43
PXN-203ENST00000323871 PKHD1L1Q86WI1 4243 aa6.06□□□□□ -1.44
PXN-203ENST00000323871 KRTAP4-8A0A0G2JLE6 195 aa6.02□□□□□ -1.45
PXN-203ENST00000323871 KRTAP4-8Q9BYQ9 185 aa6.02□□□□□ -1.45
PXN-203ENST00000323871 KMT2AQ03164 3969 aa6.01□□□□□ -1.45
PXN-203ENST00000323871 KRTAP19-3Q7Z4W3 81 aa5.98□□□□□ -1.45
PXN-203ENST00000323871 FRAS1Q86XX4 4008 aa5.97□□□□□ -1.45
PXN-203ENST00000323871 PKD1P98161 4303 aa5.97□□□□□ -1.45
PXN-203ENST00000323871 KIAA1109Q2LD37 5005 aa5.96□□□□□ -1.46
PXN-203ENST00000323871 HERC2O95714 4834 aa5.9□□□□□ -1.46
PXN-203ENST00000323871 LCE3DQ9BYE3 92 aa5.89□□□□□ -1.47
PXN-203ENST00000323871 LCE2DQ5TA82 110 aaPredicted RBP5.87□□□□□ -1.47
PXN-203ENST00000323871 MT1LQ93083 61 aa5.83□□□□□ -1.48
PXN-203ENST00000323871 LCE3EQ5T5B0 92 aa5.8□□□□□ -1.48
PXN-203ENST00000323871 KRTAP19-6Q3LI70 58 aa5.8□□□□□ -1.48
PXN-203ENST00000323871 MT1EP04732 61 aa5.79□□□□□ -1.48
PXN-203ENST00000323871 KRTAP19-2Q3LHN2 52 aa5.77□□□□□ -1.49
PXN-203ENST00000323871 KRTAP9-2Q9BYQ4 174 aa5.77□□□□□ -1.49
PXN-203ENST00000323871 LYSTQ99698 3801 aa5.76□□□□□ -1.49
PXN-203ENST00000323871 PCLOQ9Y6V0 5065 aa5.75□□□□□ -1.49
PXN-203ENST00000323871 HECTD4Q9Y4D8 3996 aa5.72□□□□□ -1.49
PXN-203ENST00000323871 MT3P25713 68 aa5.65□□□□□ -1.51
PXN-203ENST00000323871 MT1MQ8N339 61 aa5.64□□□□□ -1.51
PXN-203ENST00000323871 MUC17Q685J3 4493 aa5.62□□□□□ -1.51
PXN-203ENST00000323871 MT4P47944 62 aa5.58□□□□□ -1.52
PXN-203ENST00000323871 KRTAP9-6A0A140TA67 174 aa5.57□□□□□ -1.52
PXN-203ENST00000323871 KRTAP4-7Q9BYR0 210 aa5.56□□□□□ -1.52
PXN-203ENST00000323871 LRP2P98164 4655 aa5.54□□□□□ -1.52
PXN-203ENST00000323871 LCE2AQ5TA79 106 aaPredicted RBP5.47□□□□□ -1.53
PXN-203ENST00000323871 HYDINQ4G0P3 5121 aa5.44□□□□□ -1.54
PXN-203ENST00000323871 PKHD1P08F94 4074 aa5.43□□□□□ -1.54
PXN-203ENST00000323871 KMT2CQ8NEZ4 4911 aaKnown RBP5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms