RNA–Protein interactions for RNA: ENST00000320892.10

RNF144A-201, Transcript of ring finger protein 144A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF144A, Length 5,743 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144A-201ENST00000320892 KRTAP10-5P60370 271 aa7.56□□□□□ -1.2
RNF144A-201ENST00000320892 KRTAP23-1A1A580 65 aa7.54□□□□□ -1.2
RNF144A-201ENST00000320892 KRTAP8-1Q8IUC2 63 aa7.44□□□□□ -1.22
RNF144A-201ENST00000320892 ALMS1Q8TCU4 4167 aa7.38□□□□□ -1.23
RNF144A-201ENST00000320892 DNAH5Q8TE73 4624 aa7.37□□□□□ -1.23
RNF144A-201ENST00000320892 KRTAP4-1Q9BYQ7 146 aa7.32□□□□□ -1.24
RNF144A-201ENST00000320892 ZNF469Q96JG9 3925 aaPredicted RBP7.29□□□□□ -1.24
RNF144A-201ENST00000320892 DNAH9Q9NYC9 4486 aa7.25□□□□□ -1.25
RNF144A-201ENST00000320892 DNAH10Q8IVF4 4471 aa7.22□□□□□ -1.25
RNF144A-201ENST00000320892 PLECQ15149 4684 aaKnown RBP7.21□□□□□ -1.25
RNF144A-201ENST00000320892 DNAH1Q9P2D7 4330 aa7.2□□□□□ -1.26
RNF144A-201ENST00000320892 MT1HP80294 61 aa7.17□□□□□ -1.26
RNF144A-201ENST00000320892 FAT1Q14517 4588 aa7.15□□□□□ -1.26
RNF144A-201ENST00000320892 DNAH11Q96DT5 4516 aa7.14□□□□□ -1.27
RNF144A-201ENST00000320892 AKAP9Q99996 3911 aa7.12□□□□□ -1.27
RNF144A-201ENST00000320892 MT2AP02795 61 aa7.1□□□□□ -1.27
RNF144A-201ENST00000320892 DNAH2Q9P225 4427 aa7.03□□□□□ -1.28
RNF144A-201ENST00000320892 KRTAP19-5Q3LI72 72 aa7□□□□□ -1.29
RNF144A-201ENST00000320892 SPRR2GQ9BYE4 73 aa6.99□□□□□ -1.29
RNF144A-201ENST00000320892 MT1FP04733 61 aa6.98□□□□□ -1.29
RNF144A-201ENST00000320892 DNAH8Q96JB1 4490 aa6.96□□□□□ -1.29
RNF144A-201ENST00000320892 SPRR2FQ96RM1 72 aa6.94□□□□□ -1.3
RNF144A-201ENST00000320892 DYNC1H1Q14204 4646 aaKnown RBP6.9□□□□□ -1.31
RNF144A-201ENST00000320892 DNAH17Q9UFH2 4485 aa6.9□□□□□ -1.31
RNF144A-201ENST00000320892 DNHD1Q96M86 4753 aa6.89□□□□□ -1.31
RNF144A-201ENST00000320892 LRP1BQ9NZR2 4599 aa6.87□□□□□ -1.31
RNF144A-201ENST00000320892 RYR1P21817 5038 aa6.86□□□□□ -1.31
RNF144A-201ENST00000320892 KRTAP10-7P60409 375 aaPredicted RBP6.85□□□□□ -1.31
RNF144A-201ENST00000320892 LCE3CQ5T5A8 94 aa6.85□□□□□ -1.31
RNF144A-201ENST00000320892 VPS13DQ5THJ4 4388 aa6.83□□□□□ -1.32
RNF144A-201ENST00000320892 SACSQ9NZJ4 4579 aa6.79□□□□□ -1.32
RNF144A-201ENST00000320892 STARD9Q9P2P6 4700 aa6.7□□□□□ -1.34
RNF144A-201ENST00000320892 FAT2Q9NYQ8 4349 aa6.7□□□□□ -1.34
RNF144A-201ENST00000320892 APOBP04114 4563 aaKnown RBP6.69□□□□□ -1.34
RNF144A-201ENST00000320892 ANK2Q01484 3957 aa6.65□□□□□ -1.34
RNF144A-201ENST00000320892 VPS13BQ7Z7G8 4022 aa6.63□□□□□ -1.35
RNF144A-201ENST00000320892 DYNC2H1Q8NCM8 4307 aaKnown RBP6.6□□□□□ -1.35
RNF144A-201ENST00000320892 DNAH3Q8TD57 4116 aa6.6□□□□□ -1.35
RNF144A-201ENST00000320892 MYCBP2O75592 4640 aa6.54□□□□□ -1.36
RNF144A-201ENST00000320892 LCE3BQ5TA77 95 aa6.54□□□□□ -1.36
RNF144A-201ENST00000320892 KRTAP19-1Q8IUB9 90 aa6.51□□□□□ -1.37
RNF144A-201ENST00000320892 KMT2AQ03164 3969 aa6.48□□□□□ -1.37
RNF144A-201ENST00000320892 LYSTQ99698 3801 aa6.48□□□□□ -1.37
RNF144A-201ENST00000320892 SPRR2EP22531 72 aa6.45□□□□□ -1.38
RNF144A-201ENST00000320892 SPRR2BP35325 72 aa6.45□□□□□ -1.38
RNF144A-201ENST00000320892 SPRR2AP35326 72 aa6.45□□□□□ -1.38
RNF144A-201ENST00000320892 MT1GP13640 62 aa6.44□□□□□ -1.38
RNF144A-201ENST00000320892 RYR3Q15413 4870 aa6.43□□□□□ -1.38
RNF144A-201ENST00000320892 KRTAP17-1Q9BYP8 105 aa6.43□□□□□ -1.38
RNF144A-201ENST00000320892 KRTAP19-8Q3LI54 63 aa6.41□□□□□ -1.38
RNF144A-201ENST00000320892 MT1XP80297 61 aa6.41□□□□□ -1.38
RNF144A-201ENST00000320892 PRKDCP78527 4128 aaKnown RBP6.4□□□□□ -1.39
RNF144A-201ENST00000320892 CMYA5Q8N3K9 4069 aa6.39□□□□□ -1.39
RNF144A-201ENST00000320892 KRTAP12-4P60329 112 aa6.36□□□□□ -1.39
RNF144A-201ENST00000320892 KRTAP4-8A0A0G2JLE6 195 aa6.34□□□□□ -1.39
RNF144A-201ENST00000320892 KRTAP4-8Q9BYQ9 185 aa6.34□□□□□ -1.39
RNF144A-201ENST00000320892 FRAS1Q86XX4 4008 aa6.33□□□□□ -1.4
RNF144A-201ENST00000320892 FAT3Q8TDW7 4589 aa6.33□□□□□ -1.4
RNF144A-201ENST00000320892 KRTAP19-4Q3LI73 84 aa6.32□□□□□ -1.4
RNF144A-201ENST00000320892 MT1BP07438 61 aa6.29□□□□□ -1.4
RNF144A-201ENST00000320892 LRP1Q07954 4544 aaKnown RBP6.29□□□□□ -1.4
RNF144A-201ENST00000320892 KIAA1109Q2LD37 5005 aa6.25□□□□□ -1.41
RNF144A-201ENST00000320892 SPRR2DP22532 72 aa6.22□□□□□ -1.41
RNF144A-201ENST00000320892 KRTAP9-8Q9BYQ0 159 aa6.2□□□□□ -1.42
RNF144A-201ENST00000320892 DNAH7Q8WXX0 4024 aa6.18□□□□□ -1.42
RNF144A-201ENST00000320892 LCE2BO14633 110 aa6.17□□□□□ -1.42
RNF144A-201ENST00000320892 DNAH6Q9C0G6 4158 aa6.13□□□□□ -1.43
RNF144A-201ENST00000320892 LCE3DQ9BYE3 92 aa6.08□□□□□ -1.44
RNF144A-201ENST00000320892 KRTAP4-7Q9BYR0 210 aa6.06□□□□□ -1.44
RNF144A-201ENST00000320892 KRTAP9-3Q9BYQ3 159 aa6.05□□□□□ -1.44
RNF144A-201ENST00000320892 SPRR5A0A1B0GTR4 108 aa6.05□□□□□ -1.44
RNF144A-201ENST00000320892 RYR2Q92736 4967 aa6.04□□□□□ -1.44
RNF144A-201ENST00000320892 LCE2CQ5TA81 110 aa6.02□□□□□ -1.45
RNF144A-201ENST00000320892 LRP2P98164 4655 aa6□□□□□ -1.45
RNF144A-201ENST00000320892 HECTD4Q9Y4D8 3996 aa5.97□□□□□ -1.45
RNF144A-201ENST00000320892 LCE3EQ5T5B0 92 aa5.96□□□□□ -1.45
RNF144A-201ENST00000320892 PKD1P98161 4303 aa5.96□□□□□ -1.46
RNF144A-201ENST00000320892 LPAP08519 4548 aa5.9□□□□□ -1.46
RNF144A-201ENST00000320892 HERC2O95714 4834 aa5.9□□□□□ -1.46
RNF144A-201ENST00000320892 HERC1Q15751 4861 aa5.88□□□□□ -1.47
RNF144A-201ENST00000320892 PCLOQ9Y6V0 5065 aa5.87□□□□□ -1.47
RNF144A-201ENST00000320892 KRTAP19-3Q7Z4W3 81 aa5.86□□□□□ -1.47
RNF144A-201ENST00000320892 MT1LQ93083 61 aa5.84□□□□□ -1.48
RNF144A-201ENST00000320892 HSPG2P98160 4391 aa5.84□□□□□ -1.48
RNF144A-201ENST00000320892 HYDINQ4G0P3 5121 aa5.83□□□□□ -1.48
RNF144A-201ENST00000320892 MT1EP04732 61 aa5.76□□□□□ -1.49
RNF144A-201ENST00000320892 LCE2DQ5TA82 110 aaPredicted RBP5.71□□□□□ -1.49
RNF144A-201ENST00000320892 PKHD1P08F94 4074 aa5.71□□□□□ -1.5
RNF144A-201ENST00000320892 LOC100996750A0A140TA64 210 aa5.71□□□□□ -1.5
RNF144A-201ENST00000320892 KMT2CQ8NEZ4 4911 aaKnown RBP5.71□□□□□ -1.5
RNF144A-201ENST00000320892 PKHD1L1Q86WI1 4243 aa5.68□□□□□ -1.5
RNF144A-201ENST00000320892 EPPK1P58107 5090 aaKnown RBP5.66□□□□□ -1.5
RNF144A-201ENST00000320892 KRTAP19-2Q3LHN2 52 aa5.65□□□□□ -1.51
RNF144A-201ENST00000320892 KRTAP4-3Q9BYR4 195 aa5.64□□□□□ -1.51
RNF144A-201ENST00000320892 BIRC6Q9NR09 4857 aa5.64□□□□□ -1.51
RNF144A-201ENST00000320892 MT4P47944 62 aa5.63□□□□□ -1.51
RNF144A-201ENST00000320892 PRM1P04553 51 aa5.63□□□□□ -1.51
RNF144A-201ENST00000320892 SYNE1Q8NF91 8797 aaKnown RBP5.62□□□□□ -1.51
RNF144A-201ENST00000320892 MT1MQ8N339 61 aa5.61□□□□□ -1.51
RNF144A-201ENST00000320892 MT3P25713 68 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms