RNA–Protein interactions for RNA: ENST00000317357.9

SOBP-201, Transcript of sine oculis binding protein homolog, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SOBP, Length 5,245 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOBP-201ENST00000317357 KRTAP23-1A1A580 65 aa8.72□□□□□ -1.01
SOBP-201ENST00000317357 DNAH10Q8IVF4 4471 aa8.67□□□□□ -1.02
SOBP-201ENST00000317357 PLECQ15149 4684 aaKnown RBP8.63□□□□□ -1.03
SOBP-201ENST00000317357 DNAH1Q9P2D7 4330 aa8.61□□□□□ -1.03
SOBP-201ENST00000317357 DNAH3Q8TD57 4116 aa8.61□□□□□ -1.03
SOBP-201ENST00000317357 LCE3AQ5TA76 89 aa8.57□□□□□ -1.04
SOBP-201ENST00000317357 ALMS1Q8TCU4 4167 aa8.55□□□□□ -1.04
SOBP-201ENST00000317357 CMYA5Q8N3K9 4069 aa8.55□□□□□ -1.04
SOBP-201ENST00000317357 CSMD3Q7Z407 3707 aa8.54□□□□□ -1.04
SOBP-201ENST00000317357 VPS13DQ5THJ4 4388 aa8.54□□□□□ -1.04
SOBP-201ENST00000317357 DNAH17Q9UFH2 4485 aa8.51□□□□□ -1.05
SOBP-201ENST00000317357 ANK2Q01484 3957 aa8.42□□□□□ -1.06
SOBP-201ENST00000317357 LORP23490 312 aaPredicted RBP8.41□□□□□ -1.06
SOBP-201ENST00000317357 DYNC2H1Q8NCM8 4307 aaKnown RBP8.38□□□□□ -1.07
SOBP-201ENST00000317357 STARD9Q9P2P6 4700 aa8.38□□□□□ -1.07
SOBP-201ENST00000317357 DNAH8Q96JB1 4490 aa8.34□□□□□ -1.07
SOBP-201ENST00000317357 KRTAP10-5P60370 271 aa8.33□□□□□ -1.08
SOBP-201ENST00000317357 DNAH2Q9P225 4427 aa8.3□□□□□ -1.08
SOBP-201ENST00000317357 DNAH11Q96DT5 4516 aa8.27□□□□□ -1.09
SOBP-201ENST00000317357 KRTAP8-1Q8IUC2 63 aa8.21□□□□□ -1.09
SOBP-201ENST00000317357 DNHD1Q96M86 4753 aa8.19□□□□□ -1.1
SOBP-201ENST00000317357 DNAH5Q8TE73 4624 aa8.18□□□□□ -1.1
SOBP-201ENST00000317357 LYSTQ99698 3801 aa8.17□□□□□ -1.1
SOBP-201ENST00000317357 PRKDCP78527 4128 aaKnown RBP8.14□□□□□ -1.11
SOBP-201ENST00000317357 KMT2AQ03164 3969 aa8.13□□□□□ -1.11
SOBP-201ENST00000317357 HECTD4Q9Y4D8 3996 aa8.1□□□□□ -1.11
SOBP-201ENST00000317357 DNAH6Q9C0G6 4158 aa8.1□□□□□ -1.11
SOBP-201ENST00000317357 DNAH7Q8WXX0 4024 aa8.07□□□□□ -1.12
SOBP-201ENST00000317357 FRAS1Q86XX4 4008 aa8.07□□□□□ -1.12
SOBP-201ENST00000317357 LRP1BQ9NZR2 4599 aa8.04□□□□□ -1.12
SOBP-201ENST00000317357 SACSQ9NZJ4 4579 aa7.97□□□□□ -1.13
SOBP-201ENST00000317357 DYNC1H1Q14204 4646 aaKnown RBP7.95□□□□□ -1.14
SOBP-201ENST00000317357 VPS13BQ7Z7G8 4022 aa7.91□□□□□ -1.14
SOBP-201ENST00000317357 FAT2Q9NYQ8 4349 aa7.87□□□□□ -1.15
SOBP-201ENST00000317357 MT1HP80294 61 aa7.83□□□□□ -1.16
SOBP-201ENST00000317357 KRTAP4-1Q9BYQ7 146 aa7.81□□□□□ -1.16
SOBP-201ENST00000317357 FAT1Q14517 4588 aa7.79□□□□□ -1.16
SOBP-201ENST00000317357 SPRR2GQ9BYE4 73 aa7.76□□□□□ -1.17
SOBP-201ENST00000317357 KRTAP19-4Q3LI73 84 aa7.75□□□□□ -1.17
SOBP-201ENST00000317357 MT2AP02795 61 aa7.71□□□□□ -1.18
SOBP-201ENST00000317357 RYR1P21817 5038 aa7.71□□□□□ -1.18
SOBP-201ENST00000317357 KRTAP10-7P60409 375 aaPredicted RBP7.67□□□□□ -1.18
SOBP-201ENST00000317357 HYDINQ4G0P3 5121 aa7.61□□□□□ -1.19
SOBP-201ENST00000317357 KRTAP19-5Q3LI72 72 aa7.6□□□□□ -1.19
SOBP-201ENST00000317357 APOBP04114 4563 aaKnown RBP7.6□□□□□ -1.19
SOBP-201ENST00000317357 PKD1P98161 4303 aa7.58□□□□□ -1.2
SOBP-201ENST00000317357 SPRR2FQ96RM1 72 aa7.55□□□□□ -1.2
SOBP-201ENST00000317357 LCE3CQ5T5A8 94 aa7.55□□□□□ -1.2
SOBP-201ENST00000317357 MT1FP04733 61 aa7.5□□□□□ -1.21
SOBP-201ENST00000317357 FAT3Q8TDW7 4589 aa7.48□□□□□ -1.21
SOBP-201ENST00000317357 PKHD1L1Q86WI1 4243 aa7.41□□□□□ -1.22
SOBP-201ENST00000317357 KIAA1109Q2LD37 5005 aa7.41□□□□□ -1.22
SOBP-201ENST00000317357 RYR3Q15413 4870 aa7.4□□□□□ -1.22
SOBP-201ENST00000317357 PKHD1P08F94 4074 aa7.4□□□□□ -1.23
SOBP-201ENST00000317357 RYR2Q92736 4967 aa7.38□□□□□ -1.23
SOBP-201ENST00000317357 KRTAP17-1Q9BYP8 105 aa7.34□□□□□ -1.23
SOBP-201ENST00000317357 LRP1Q07954 4544 aaKnown RBP7.33□□□□□ -1.24
SOBP-201ENST00000317357 MYCBP2O75592 4640 aa7.25□□□□□ -1.25
SOBP-201ENST00000317357 HSPG2P98160 4391 aa7.22□□□□□ -1.25
SOBP-201ENST00000317357 BIRC6Q9NR09 4857 aa7.2□□□□□ -1.26
SOBP-201ENST00000317357 KRTAP19-8Q3LI54 63 aa7.19□□□□□ -1.26
SOBP-201ENST00000317357 TNXBP22105 4242 aa7.18□□□□□ -1.26
SOBP-201ENST00000317357 LCE3BQ5TA77 95 aa7.11□□□□□ -1.27
SOBP-201ENST00000317357 HERC2O95714 4834 aa7.08□□□□□ -1.28
SOBP-201ENST00000317357 KRTAP12-4P60329 112 aa7.07□□□□□ -1.28
SOBP-201ENST00000317357 KRTAP19-1Q8IUB9 90 aa7.07□□□□□ -1.28
SOBP-201ENST00000317357 SPRR2EP22531 72 aa7.06□□□□□ -1.28
SOBP-201ENST00000317357 SPRR2BP35325 72 aa7.06□□□□□ -1.28
SOBP-201ENST00000317357 SPRR2AP35326 72 aa7.06□□□□□ -1.28
SOBP-201ENST00000317357 MT1GP13640 62 aa6.95□□□□□ -1.3
SOBP-201ENST00000317357 LRP2P98164 4655 aa6.94□□□□□ -1.3
SOBP-201ENST00000317357 MT1XP80297 61 aa6.94□□□□□ -1.3
SOBP-201ENST00000317357 HERC1Q15751 4861 aa6.93□□□□□ -1.3
SOBP-201ENST00000317357 KMT2CQ8NEZ4 4911 aaKnown RBP6.92□□□□□ -1.3
SOBP-201ENST00000317357 LCE2BO14633 110 aa6.87□□□□□ -1.31
SOBP-201ENST00000317357 SPRR2DP22532 72 aa6.87□□□□□ -1.31
SOBP-201ENST00000317357 KRTAP9-8Q9BYQ0 159 aa6.84□□□□□ -1.31
SOBP-201ENST00000317357 LPAP08519 4548 aa6.84□□□□□ -1.32
SOBP-201ENST00000317357 PCLOQ9Y6V0 5065 aa6.83□□□□□ -1.32
SOBP-201ENST00000317357 MT1BP07438 61 aa6.8□□□□□ -1.32
SOBP-201ENST00000317357 SPRR5A0A1B0GTR4 108 aa6.8□□□□□ -1.32
SOBP-201ENST00000317357 LCE2CQ5TA81 110 aa6.8□□□□□ -1.32
SOBP-201ENST00000317357 LCE3DQ9BYE3 92 aa6.76□□□□□ -1.33
SOBP-201ENST00000317357 LCE2DQ5TA82 110 aaPredicted RBP6.76□□□□□ -1.33
SOBP-201ENST00000317357 KRTAP4-8A0A0G2JLE6 195 aa6.76□□□□□ -1.33
SOBP-201ENST00000317357 KRTAP4-8Q9BYQ9 185 aa6.76□□□□□ -1.33
SOBP-201ENST00000317357 KRTAP9-3Q9BYQ3 159 aa6.71□□□□□ -1.34
SOBP-201ENST00000317357 KRTAP19-2Q3LHN2 52 aa6.69□□□□□ -1.34
SOBP-201ENST00000317357 LCE3EQ5T5B0 92 aa6.67□□□□□ -1.34
SOBP-201ENST00000317357 MUC17Q685J3 4493 aa6.58□□□□□ -1.36
SOBP-201ENST00000317357 SYNE1Q8NF91 8797 aaKnown RBP6.55□□□□□ -1.36
SOBP-201ENST00000317357 EPPK1P58107 5090 aaKnown RBP6.54□□□□□ -1.36
SOBP-201ENST00000317357 KRTAP19-3Q7Z4W3 81 aa6.49□□□□□ -1.37
SOBP-201ENST00000317357 FLGP20930 4061 aaPredicted RBP6.48□□□□□ -1.37
SOBP-201ENST00000317357 MT1LQ93083 61 aa6.45□□□□□ -1.38
SOBP-201ENST00000317357 KRTAP4-7Q9BYR0 210 aa6.45□□□□□ -1.38
SOBP-201ENST00000317357 ABCA13Q86UQ4 5058 aa6.43□□□□□ -1.38
SOBP-201ENST00000317357 KRTAP9-2Q9BYQ4 174 aa6.43□□□□□ -1.38
SOBP-201ENST00000317357 MT1EP04732 61 aa6.28□□□□□ -1.4
SOBP-201ENST00000317357 MT3P25713 68 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms