RNA–Protein interactions for RNA: ENST00000309890.11

ATP2A3-201, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3, humanhuman

TSL 5 BASIC

Gene ATP2A3, Length 4,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3-201ENST00000309890 KRTAP23-1A1A580 65 aa7.85□□□□□ -1.15
ATP2A3-201ENST00000309890 DNAH11Q96DT5 4516 aa7.82□□□□□ -1.16
ATP2A3-201ENST00000309890 LORP23490 312 aaPredicted RBP7.81□□□□□ -1.16
ATP2A3-201ENST00000309890 ALMS1Q8TCU4 4167 aa7.79□□□□□ -1.16
ATP2A3-201ENST00000309890 DNAH10Q8IVF4 4471 aa7.76□□□□□ -1.17
ATP2A3-201ENST00000309890 KRTAP10-12P60413 245 aa7.75□□□□□ -1.17
ATP2A3-201ENST00000309890 INE1O15225 51 aa7.75□□□□□ -1.17
ATP2A3-201ENST00000309890 DNAH17Q9UFH2 4485 aa7.73□□□□□ -1.17
ATP2A3-201ENST00000309890 VPS13DQ5THJ4 4388 aa7.71□□□□□ -1.17
ATP2A3-201ENST00000309890 KRTAP12-3P60328 96 aa7.63□□□□□ -1.19
ATP2A3-201ENST00000309890 DNHD1Q96M86 4753 aa7.6□□□□□ -1.19
ATP2A3-201ENST00000309890 LCE3AQ5TA76 89 aa7.59□□□□□ -1.19
ATP2A3-201ENST00000309890 DNAH2Q9P225 4427 aa7.54□□□□□ -1.2
ATP2A3-201ENST00000309890 DYNC1H1Q14204 4646 aaKnown RBP7.52□□□□□ -1.21
ATP2A3-201ENST00000309890 STARD9Q9P2P6 4700 aa7.51□□□□□ -1.21
ATP2A3-201ENST00000309890 FAT1Q14517 4588 aa7.49□□□□□ -1.21
ATP2A3-201ENST00000309890 DNAH8Q96JB1 4490 aa7.49□□□□□ -1.21
ATP2A3-201ENST00000309890 LRP1BQ9NZR2 4599 aa7.47□□□□□ -1.21
ATP2A3-201ENST00000309890 KRTAP4-1Q9BYQ7 146 aa7.47□□□□□ -1.21
ATP2A3-201ENST00000309890 DNAH3Q8TD57 4116 aa7.39□□□□□ -1.23
ATP2A3-201ENST00000309890 SACSQ9NZJ4 4579 aa7.36□□□□□ -1.23
ATP2A3-201ENST00000309890 DYNC2H1Q8NCM8 4307 aaKnown RBP7.36□□□□□ -1.23
ATP2A3-201ENST00000309890 RYR1P21817 5038 aa7.27□□□□□ -1.25
ATP2A3-201ENST00000309890 SPRR2GQ9BYE4 73 aa7.25□□□□□ -1.25
ATP2A3-201ENST00000309890 ANK2Q01484 3957 aa7.24□□□□□ -1.25
ATP2A3-201ENST00000309890 FAT2Q9NYQ8 4349 aa7.24□□□□□ -1.25
ATP2A3-201ENST00000309890 PRKDCP78527 4128 aaKnown RBP7.24□□□□□ -1.25
ATP2A3-201ENST00000309890 CRCT1Q9UGL9 99 aa7.19□□□□□ -1.26
ATP2A3-201ENST00000309890 APOBP04114 4563 aaKnown RBP7.18□□□□□ -1.26
ATP2A3-201ENST00000309890 KMT2AQ03164 3969 aa7.18□□□□□ -1.26
ATP2A3-201ENST00000309890 VPS13BQ7Z7G8 4022 aa7.16□□□□□ -1.26
ATP2A3-201ENST00000309890 MT1HP80294 61 aa7.15□□□□□ -1.26
ATP2A3-201ENST00000309890 MT2AP02795 61 aa7.14□□□□□ -1.27
ATP2A3-201ENST00000309890 MYCBP2O75592 4640 aa7.11□□□□□ -1.27
ATP2A3-201ENST00000309890 LYSTQ99698 3801 aa7.04□□□□□ -1.28
ATP2A3-201ENST00000309890 KIAA1109Q2LD37 5005 aa7.03□□□□□ -1.28
ATP2A3-201ENST00000309890 MT1FP04733 61 aa7.01□□□□□ -1.29
ATP2A3-201ENST00000309890 KRTAP8-1Q8IUC2 63 aa7□□□□□ -1.29
ATP2A3-201ENST00000309890 FRAS1Q86XX4 4008 aa6.93□□□□□ -1.3
ATP2A3-201ENST00000309890 HECTD4Q9Y4D8 3996 aa6.91□□□□□ -1.3
ATP2A3-201ENST00000309890 LRP1Q07954 4544 aaKnown RBP6.9□□□□□ -1.31
ATP2A3-201ENST00000309890 KRTAP17-1Q9BYP8 105 aa6.9□□□□□ -1.31
ATP2A3-201ENST00000309890 CMYA5Q8N3K9 4069 aa6.88□□□□□ -1.31
ATP2A3-201ENST00000309890 DNAH6Q9C0G6 4158 aa6.87□□□□□ -1.31
ATP2A3-201ENST00000309890 RYR3Q15413 4870 aa6.86□□□□□ -1.31
ATP2A3-201ENST00000309890 KRTAP19-1Q8IUB9 90 aa6.84□□□□□ -1.31
ATP2A3-201ENST00000309890 KRTAP10-5P60370 271 aa6.84□□□□□ -1.31
ATP2A3-201ENST00000309890 RYR2Q92736 4967 aa6.81□□□□□ -1.32
ATP2A3-201ENST00000309890 FAT3Q8TDW7 4589 aa6.81□□□□□ -1.32
ATP2A3-201ENST00000309890 DNAH7Q8WXX0 4024 aa6.8□□□□□ -1.32
ATP2A3-201ENST00000309890 KRTAP19-5Q3LI72 72 aa6.79□□□□□ -1.32
ATP2A3-201ENST00000309890 KRTAP19-8Q3LI54 63 aa6.77□□□□□ -1.33
ATP2A3-201ENST00000309890 LCE3CQ5T5A8 94 aa6.76□□□□□ -1.33
ATP2A3-201ENST00000309890 KRTAP19-4Q3LI73 84 aa6.68□□□□□ -1.34
ATP2A3-201ENST00000309890 LRP2P98164 4655 aa6.65□□□□□ -1.35
ATP2A3-201ENST00000309890 SPRR5A0A1B0GTR4 108 aa6.64□□□□□ -1.35
ATP2A3-201ENST00000309890 KRTAP10-7P60409 375 aaPredicted RBP6.62□□□□□ -1.35
ATP2A3-201ENST00000309890 MT1XP80297 61 aa6.58□□□□□ -1.36
ATP2A3-201ENST00000309890 HYDINQ4G0P3 5121 aa6.58□□□□□ -1.36
ATP2A3-201ENST00000309890 MT1BP07438 61 aa6.53□□□□□ -1.36
ATP2A3-201ENST00000309890 HERC2O95714 4834 aa6.5□□□□□ -1.37
ATP2A3-201ENST00000309890 PKHD1P08F94 4074 aa6.49□□□□□ -1.37
ATP2A3-201ENST00000309890 KRTAP9-8Q9BYQ0 159 aa6.49□□□□□ -1.37
ATP2A3-201ENST00000309890 LCE2CQ5TA81 110 aa6.47□□□□□ -1.37
ATP2A3-201ENST00000309890 SPRR2FQ96RM1 72 aa6.44□□□□□ -1.38
ATP2A3-201ENST00000309890 HSPG2P98160 4391 aa6.42□□□□□ -1.38
ATP2A3-201ENST00000309890 PKD1P98161 4303 aa6.4□□□□□ -1.38
ATP2A3-201ENST00000309890 KRTAP19-2Q3LHN2 52 aa6.34□□□□□ -1.39
ATP2A3-201ENST00000309890 KMT2CQ8NEZ4 4911 aaKnown RBP6.32□□□□□ -1.4
ATP2A3-201ENST00000309890 PCLOQ9Y6V0 5065 aa6.31□□□□□ -1.4
ATP2A3-201ENST00000309890 KRTAP9-3Q9BYQ3 159 aa6.3□□□□□ -1.4
ATP2A3-201ENST00000309890 BIRC6Q9NR09 4857 aa6.28□□□□□ -1.4
ATP2A3-201ENST00000309890 HERC1Q15751 4861 aa6.25□□□□□ -1.41
ATP2A3-201ENST00000309890 MUC17Q685J3 4493 aa6.22□□□□□ -1.41
ATP2A3-201ENST00000309890 PKHD1L1Q86WI1 4243 aa6.21□□□□□ -1.41
ATP2A3-201ENST00000309890 LPAP08519 4548 aa6.21□□□□□ -1.41
ATP2A3-201ENST00000309890 KRTAP4-8A0A0G2JLE6 195 aa6.21□□□□□ -1.42
ATP2A3-201ENST00000309890 KRTAP4-8Q9BYQ9 185 aa6.21□□□□□ -1.42
ATP2A3-201ENST00000309890 TNXBP22105 4242 aa6.14□□□□□ -1.43
ATP2A3-201ENST00000309890 SYNE1Q8NF91 8797 aaKnown RBP6.11□□□□□ -1.43
ATP2A3-201ENST00000309890 EPPK1P58107 5090 aaKnown RBP6.11□□□□□ -1.43
ATP2A3-201ENST00000309890 KRTAP12-4P60329 112 aa6.09□□□□□ -1.43
ATP2A3-201ENST00000309890 FLGP20930 4061 aaPredicted RBP6.08□□□□□ -1.44
ATP2A3-201ENST00000309890 MT1GP13640 62 aa6.08□□□□□ -1.44
ATP2A3-201ENST00000309890 LCE3BQ5TA77 95 aa6.03□□□□□ -1.44
ATP2A3-201ENST00000309890 LCE2BO14633 110 aa5.98□□□□□ -1.45
ATP2A3-201ENST00000309890 SPRR2EP22531 72 aa5.95□□□□□ -1.46
ATP2A3-201ENST00000309890 SPRR2BP35325 72 aa5.95□□□□□ -1.46
ATP2A3-201ENST00000309890 SPRR2AP35326 72 aa5.95□□□□□ -1.46
ATP2A3-201ENST00000309890 ABCA13Q86UQ4 5058 aa5.94□□□□□ -1.46
ATP2A3-201ENST00000309890 MT1LQ93083 61 aa5.94□□□□□ -1.46
ATP2A3-201ENST00000309890 KRTAP4-7Q9BYR0 210 aa5.91□□□□□ -1.46
ATP2A3-201ENST00000309890 MT1EP04732 61 aa5.88□□□□□ -1.47
ATP2A3-201ENST00000309890 UBR4Q5T4S7 5183 aa5.86□□□□□ -1.47
ATP2A3-201ENST00000309890 FSIP2Q5CZC0 6907 aa5.85□□□□□ -1.47
ATP2A3-201ENST00000309890 KRTAP19-3Q7Z4W3 81 aa5.84□□□□□ -1.47
ATP2A3-201ENST00000309890 LCE3DQ9BYE3 92 aa5.8□□□□□ -1.48
ATP2A3-201ENST00000309890 LCE3EQ5T5B0 92 aa5.74□□□□□ -1.49
ATP2A3-201ENST00000309890 SPRR2DP22532 72 aa5.74□□□□□ -1.49
ATP2A3-201ENST00000309890 HMCN2Q8NDA2 5059 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms