RNA–Protein interactions for RNA: ENST00000309415.7

SH3RF3-201, Transcript of SH3 domain containing ring finger 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SH3RF3, Length 5,803 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF3-201ENST00000309415 CUBNO60494 3623 aa8.33□□□□□ -1.08
SH3RF3-201ENST00000309415 SPENQ96T58 3664 aaKnown RBP8.32□□□□□ -1.08
SH3RF3-201ENST00000309415 MT2AP02795 61 aa8.3□□□□□ -1.08
SH3RF3-201ENST00000309415 DNAH5Q8TE73 4624 aa8.29□□□□□ -1.08
SH3RF3-201ENST00000309415 DNAH9Q9NYC9 4486 aa8.28□□□□□ -1.08
SH3RF3-201ENST00000309415 MUC3AQ02505 3323 aa8.24□□□□□ -1.09
SH3RF3-201ENST00000309415 DNAH1Q9P2D7 4330 aa8.24□□□□□ -1.09
SH3RF3-201ENST00000309415 SPRR2FQ96RM1 72 aa8.21□□□□□ -1.09
SH3RF3-201ENST00000309415 KRTAP10-7P60409 375 aaPredicted RBP8.16□□□□□ -1.1
SH3RF3-201ENST00000309415 SPRR2GQ9BYE4 73 aa8.15□□□□□ -1.1
SH3RF3-201ENST00000309415 DNAH11Q96DT5 4516 aa8.11□□□□□ -1.11
SH3RF3-201ENST00000309415 DNAH2Q9P225 4427 aa8.11□□□□□ -1.11
SH3RF3-201ENST00000309415 PLECQ15149 4684 aaKnown RBP8.1□□□□□ -1.11
SH3RF3-201ENST00000309415 DNAH10Q8IVF4 4471 aa8.1□□□□□ -1.11
SH3RF3-201ENST00000309415 MT1FP04733 61 aa8.09□□□□□ -1.11
SH3RF3-201ENST00000309415 BSNQ9UPA5 3926 aa8.05□□□□□ -1.12
SH3RF3-201ENST00000309415 KRTAP19-5Q3LI72 72 aa7.99□□□□□ -1.13
SH3RF3-201ENST00000309415 VPS13CQ709C8 3753 aa7.95□□□□□ -1.14
SH3RF3-201ENST00000309415 CSMD3Q7Z407 3707 aa7.83□□□□□ -1.16
SH3RF3-201ENST00000309415 LCE3CQ5T5A8 94 aa7.81□□□□□ -1.16
SH3RF3-201ENST00000309415 DYNC1H1Q14204 4646 aaKnown RBP7.8□□□□□ -1.16
SH3RF3-201ENST00000309415 DNAH17Q9UFH2 4485 aa7.8□□□□□ -1.16
SH3RF3-201ENST00000309415 SPRR2EP22531 72 aa7.8□□□□□ -1.16
SH3RF3-201ENST00000309415 SPRR2BP35325 72 aa7.8□□□□□ -1.16
SH3RF3-201ENST00000309415 SPRR2AP35326 72 aa7.8□□□□□ -1.16
SH3RF3-201ENST00000309415 VPS13DQ5THJ4 4388 aa7.78□□□□□ -1.16
SH3RF3-201ENST00000309415 AKAP9Q99996 3911 aa7.77□□□□□ -1.17
SH3RF3-201ENST00000309415 FAT2Q9NYQ8 4349 aa7.74□□□□□ -1.17
SH3RF3-201ENST00000309415 FAT1Q14517 4588 aa7.74□□□□□ -1.17
SH3RF3-201ENST00000309415 LRP1BQ9NZR2 4599 aa7.72□□□□□ -1.17
SH3RF3-201ENST00000309415 DNHD1Q96M86 4753 aa7.71□□□□□ -1.17
SH3RF3-201ENST00000309415 KRTAP19-4Q3LI73 84 aa7.69□□□□□ -1.18
SH3RF3-201ENST00000309415 RYR1P21817 5038 aa7.64□□□□□ -1.19
SH3RF3-201ENST00000309415 SACSQ9NZJ4 4579 aa7.63□□□□□ -1.19
SH3RF3-201ENST00000309415 DYNC2H1Q8NCM8 4307 aaKnown RBP7.61□□□□□ -1.19
SH3RF3-201ENST00000309415 DNAH3Q8TD57 4116 aa7.56□□□□□ -1.2
SH3RF3-201ENST00000309415 SPRR2DP22532 72 aa7.56□□□□□ -1.2
SH3RF3-201ENST00000309415 KRTAP19-8Q3LI54 63 aa7.53□□□□□ -1.2
SH3RF3-201ENST00000309415 ZNF469Q96JG9 3925 aaPredicted RBP7.48□□□□□ -1.21
SH3RF3-201ENST00000309415 STARD9Q9P2P6 4700 aa7.47□□□□□ -1.21
SH3RF3-201ENST00000309415 LCE2BO14633 110 aa7.45□□□□□ -1.22
SH3RF3-201ENST00000309415 DNAH8Q96JB1 4490 aa7.43□□□□□ -1.22
SH3RF3-201ENST00000309415 KRTAP19-1Q8IUB9 90 aa7.43□□□□□ -1.22
SH3RF3-201ENST00000309415 APOBP04114 4563 aaKnown RBP7.39□□□□□ -1.23
SH3RF3-201ENST00000309415 LCE3BQ5TA77 95 aa7.39□□□□□ -1.23
SH3RF3-201ENST00000309415 RYR3Q15413 4870 aa7.37□□□□□ -1.23
SH3RF3-201ENST00000309415 MT1XP80297 61 aa7.34□□□□□ -1.23
SH3RF3-201ENST00000309415 KRTAP12-4P60329 112 aa7.34□□□□□ -1.23
SH3RF3-201ENST00000309415 KRTAP17-1Q9BYP8 105 aa7.33□□□□□ -1.24
SH3RF3-201ENST00000309415 MT1GP13640 62 aa7.31□□□□□ -1.24
SH3RF3-201ENST00000309415 VPS13BQ7Z7G8 4022 aa7.28□□□□□ -1.24
SH3RF3-201ENST00000309415 FAT3Q8TDW7 4589 aa7.28□□□□□ -1.24
SH3RF3-201ENST00000309415 LRP1Q07954 4544 aaKnown RBP7.26□□□□□ -1.25
SH3RF3-201ENST00000309415 ANK2Q01484 3957 aa7.26□□□□□ -1.25
SH3RF3-201ENST00000309415 MT1BP07438 61 aa7.25□□□□□ -1.25
SH3RF3-201ENST00000309415 PRKDCP78527 4128 aaKnown RBP7.25□□□□□ -1.25
SH3RF3-201ENST00000309415 KRTAP9-8Q9BYQ0 159 aa7.23□□□□□ -1.25
SH3RF3-201ENST00000309415 HERC1Q15751 4861 aa7.23□□□□□ -1.25
SH3RF3-201ENST00000309415 DNAH6Q9C0G6 4158 aa7.2□□□□□ -1.26
SH3RF3-201ENST00000309415 DNAH7Q8WXX0 4024 aa7.19□□□□□ -1.26
SH3RF3-201ENST00000309415 KRTAP4-8A0A0G2JLE6 195 aa7.13□□□□□ -1.27
SH3RF3-201ENST00000309415 KRTAP4-8Q9BYQ9 185 aa7.13□□□□□ -1.27
SH3RF3-201ENST00000309415 KRTAP9-3Q9BYQ3 159 aa7.12□□□□□ -1.27
SH3RF3-201ENST00000309415 KMT2AQ03164 3969 aa7.1□□□□□ -1.27
SH3RF3-201ENST00000309415 CMYA5Q8N3K9 4069 aa7.04□□□□□ -1.28
SH3RF3-201ENST00000309415 RYR2Q92736 4967 aa7.02□□□□□ -1.28
SH3RF3-201ENST00000309415 LCE2CQ5TA81 110 aa7.01□□□□□ -1.29
SH3RF3-201ENST00000309415 HSPG2P98160 4391 aa6.97□□□□□ -1.29
SH3RF3-201ENST00000309415 LYSTQ99698 3801 aa6.93□□□□□ -1.3
SH3RF3-201ENST00000309415 LCE3DQ9BYE3 92 aa6.92□□□□□ -1.3
SH3RF3-201ENST00000309415 LCE2DQ5TA82 110 aaPredicted RBP6.91□□□□□ -1.3
SH3RF3-201ENST00000309415 KRTAP19-3Q7Z4W3 81 aa6.89□□□□□ -1.31
SH3RF3-201ENST00000309415 KIAA1109Q2LD37 5005 aa6.88□□□□□ -1.31
SH3RF3-201ENST00000309415 PKHD1L1Q86WI1 4243 aa6.87□□□□□ -1.31
SH3RF3-201ENST00000309415 BIRC6Q9NR09 4857 aa6.83□□□□□ -1.32
SH3RF3-201ENST00000309415 PKD1P98161 4303 aa6.83□□□□□ -1.32
SH3RF3-201ENST00000309415 MYCBP2O75592 4640 aa6.81□□□□□ -1.32
SH3RF3-201ENST00000309415 LCE3EQ5T5B0 92 aa6.79□□□□□ -1.32
SH3RF3-201ENST00000309415 FRAS1Q86XX4 4008 aa6.74□□□□□ -1.33
SH3RF3-201ENST00000309415 HERC2O95714 4834 aa6.71□□□□□ -1.33
SH3RF3-201ENST00000309415 MT1LQ93083 61 aa6.71□□□□□ -1.33
SH3RF3-201ENST00000309415 KRTAP9-2Q9BYQ4 174 aa6.68□□□□□ -1.34
SH3RF3-201ENST00000309415 MT1EP04732 61 aa6.67□□□□□ -1.34
SH3RF3-201ENST00000309415 PCLOQ9Y6V0 5065 aa6.67□□□□□ -1.34
SH3RF3-201ENST00000309415 MT4P47944 62 aa6.67□□□□□ -1.34
SH3RF3-201ENST00000309415 KRTAP4-7Q9BYR0 210 aa6.64□□□□□ -1.35
SH3RF3-201ENST00000309415 HECTD4Q9Y4D8 3996 aa6.6□□□□□ -1.35
SH3RF3-201ENST00000309415 SPRR5A0A1B0GTR4 108 aa6.59□□□□□ -1.35
SH3RF3-201ENST00000309415 KRTAP19-6Q3LI70 58 aa6.55□□□□□ -1.36
SH3RF3-201ENST00000309415 MT3P25713 68 aa6.54□□□□□ -1.36
SH3RF3-201ENST00000309415 KRTAP19-2Q3LHN2 52 aa6.52□□□□□ -1.37
SH3RF3-201ENST00000309415 MT1MQ8N339 61 aa6.52□□□□□ -1.37
SH3RF3-201ENST00000309415 LPAP08519 4548 aa6.43□□□□□ -1.38
SH3RF3-201ENST00000309415 LRP2P98164 4655 aa6.42□□□□□ -1.38
SH3RF3-201ENST00000309415 KRTAP9-6A0A140TA67 174 aa6.42□□□□□ -1.38
SH3RF3-201ENST00000309415 PKHD1P08F94 4074 aa6.37□□□□□ -1.39
SH3RF3-201ENST00000309415 LCE1BQ5T7P3 118 aa6.35□□□□□ -1.39
SH3RF3-201ENST00000309415 EPPK1P58107 5090 aaKnown RBP6.33□□□□□ -1.4
SH3RF3-201ENST00000309415 LCE1DQ5T752 114 aa6.32□□□□□ -1.4
SH3RF3-201ENST00000309415 HYDINQ4G0P3 5121 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms