RNA–Protein interactions for RNA: ENST00000309415.7

SH3RF3-201, Transcript of SH3 domain containing ring finger 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SH3RF3, Length 5,803 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF3-201ENST00000309415 CUBNO60494 3623 aa8.33□□□□□ -1.08
SH3RF3-201ENST00000309415 SPENQ96T58 3664 aaKnown RBP8.32□□□□□ -1.08
SH3RF3-201ENST00000309415 MT2AP02795 61 aa8.3□□□□□ -1.08
SH3RF3-201ENST00000309415 DNAH5Q8TE73 4624 aa8.29□□□□□ -1.08
SH3RF3-201ENST00000309415 DNAH9Q9NYC9 4486 aa8.28□□□□□ -1.08
SH3RF3-201ENST00000309415 MUC3AQ02505 3323 aa8.24□□□□□ -1.09
SH3RF3-201ENST00000309415 DNAH1Q9P2D7 4330 aa8.24□□□□□ -1.09
SH3RF3-201ENST00000309415 SPRR2FQ96RM1 72 aa8.21□□□□□ -1.09
SH3RF3-201ENST00000309415 KRTAP10-7P60409 375 aaPredicted RBP8.16□□□□□ -1.1
SH3RF3-201ENST00000309415 SPRR2GQ9BYE4 73 aa8.15□□□□□ -1.1
SH3RF3-201ENST00000309415 DNAH11Q96DT5 4516 aa8.11□□□□□ -1.11
SH3RF3-201ENST00000309415 DNAH2Q9P225 4427 aa8.11□□□□□ -1.11
SH3RF3-201ENST00000309415 PLECQ15149 4684 aaKnown RBP8.1□□□□□ -1.11
SH3RF3-201ENST00000309415 DNAH10Q8IVF4 4471 aa8.1□□□□□ -1.11
SH3RF3-201ENST00000309415 MT1FP04733 61 aa8.09□□□□□ -1.11
SH3RF3-201ENST00000309415 BSNQ9UPA5 3926 aa8.05□□□□□ -1.12
SH3RF3-201ENST00000309415 KRTAP19-5Q3LI72 72 aa7.99□□□□□ -1.13
SH3RF3-201ENST00000309415 VPS13CQ709C8 3753 aa7.95□□□□□ -1.14
SH3RF3-201ENST00000309415 CSMD3Q7Z407 3707 aa7.83□□□□□ -1.16
SH3RF3-201ENST00000309415 LCE3CQ5T5A8 94 aa7.81□□□□□ -1.16
SH3RF3-201ENST00000309415 DYNC1H1Q14204 4646 aaKnown RBP7.8□□□□□ -1.16
SH3RF3-201ENST00000309415 DNAH17Q9UFH2 4485 aa7.8□□□□□ -1.16
SH3RF3-201ENST00000309415 SPRR2EP22531 72 aa7.8□□□□□ -1.16
SH3RF3-201ENST00000309415 SPRR2BP35325 72 aa7.8□□□□□ -1.16
SH3RF3-201ENST00000309415 SPRR2AP35326 72 aa7.8□□□□□ -1.16
SH3RF3-201ENST00000309415 VPS13DQ5THJ4 4388 aa7.78□□□□□ -1.16
SH3RF3-201ENST00000309415 AKAP9Q99996 3911 aa7.77□□□□□ -1.17
SH3RF3-201ENST00000309415 FAT2Q9NYQ8 4349 aa7.74□□□□□ -1.17
SH3RF3-201ENST00000309415 FAT1Q14517 4588 aa7.74□□□□□ -1.17
SH3RF3-201ENST00000309415 LRP1BQ9NZR2 4599 aa7.72□□□□□ -1.17
SH3RF3-201ENST00000309415 DNHD1Q96M86 4753 aa7.71□□□□□ -1.17
SH3RF3-201ENST00000309415 KRTAP19-4Q3LI73 84 aa7.69□□□□□ -1.18
SH3RF3-201ENST00000309415 RYR1P21817 5038 aa7.64□□□□□ -1.19
SH3RF3-201ENST00000309415 SACSQ9NZJ4 4579 aa7.63□□□□□ -1.19
SH3RF3-201ENST00000309415 DYNC2H1Q8NCM8 4307 aaKnown RBP7.61□□□□□ -1.19
SH3RF3-201ENST00000309415 DNAH3Q8TD57 4116 aa7.56□□□□□ -1.2
SH3RF3-201ENST00000309415 SPRR2DP22532 72 aa7.56□□□□□ -1.2
SH3RF3-201ENST00000309415 KRTAP19-8Q3LI54 63 aa7.53□□□□□ -1.2
SH3RF3-201ENST00000309415 ZNF469Q96JG9 3925 aaPredicted RBP7.48□□□□□ -1.21
SH3RF3-201ENST00000309415 STARD9Q9P2P6 4700 aa7.47□□□□□ -1.21
SH3RF3-201ENST00000309415 LCE2BO14633 110 aa7.45□□□□□ -1.22
SH3RF3-201ENST00000309415 DNAH8Q96JB1 4490 aa7.43□□□□□ -1.22
SH3RF3-201ENST00000309415 KRTAP19-1Q8IUB9 90 aa7.43□□□□□ -1.22
SH3RF3-201ENST00000309415 APOBP04114 4563 aaKnown RBP7.39□□□□□ -1.23
SH3RF3-201ENST00000309415 LCE3BQ5TA77 95 aa7.39□□□□□ -1.23
SH3RF3-201ENST00000309415 RYR3Q15413 4870 aa7.37□□□□□ -1.23
SH3RF3-201ENST00000309415 MT1XP80297 61 aa7.34□□□□□ -1.23
SH3RF3-201ENST00000309415 KRTAP12-4P60329 112 aa7.34□□□□□ -1.23
SH3RF3-201ENST00000309415 KRTAP17-1Q9BYP8 105 aa7.33□□□□□ -1.24
SH3RF3-201ENST00000309415 MT1GP13640 62 aa7.31□□□□□ -1.24
SH3RF3-201ENST00000309415 VPS13BQ7Z7G8 4022 aa7.28□□□□□ -1.24
SH3RF3-201ENST00000309415 FAT3Q8TDW7 4589 aa7.28□□□□□ -1.24
SH3RF3-201ENST00000309415 LRP1Q07954 4544 aaKnown RBP7.26□□□□□ -1.25
SH3RF3-201ENST00000309415 ANK2Q01484 3957 aa7.26□□□□□ -1.25
SH3RF3-201ENST00000309415 MT1BP07438 61 aa7.25□□□□□ -1.25
SH3RF3-201ENST00000309415 PRKDCP78527 4128 aaKnown RBP7.25□□□□□ -1.25
SH3RF3-201ENST00000309415 KRTAP9-8Q9BYQ0 159 aa7.23□□□□□ -1.25
SH3RF3-201ENST00000309415 HERC1Q15751 4861 aa7.23□□□□□ -1.25
SH3RF3-201ENST00000309415 DNAH6Q9C0G6 4158 aa7.2□□□□□ -1.26
SH3RF3-201ENST00000309415 DNAH7Q8WXX0 4024 aa7.19□□□□□ -1.26
SH3RF3-201ENST00000309415 KRTAP4-8A0A0G2JLE6 195 aa7.13□□□□□ -1.27
SH3RF3-201ENST00000309415 KRTAP4-8Q9BYQ9 185 aa7.13□□□□□ -1.27
SH3RF3-201ENST00000309415 KRTAP9-3Q9BYQ3 159 aa7.12□□□□□ -1.27
SH3RF3-201ENST00000309415 KMT2AQ03164 3969 aa7.1□□□□□ -1.27
SH3RF3-201ENST00000309415 CMYA5Q8N3K9 4069 aa7.04□□□□□ -1.28
SH3RF3-201ENST00000309415 RYR2Q92736 4967 aa7.02□□□□□ -1.28
SH3RF3-201ENST00000309415 LCE2CQ5TA81 110 aa7.01□□□□□ -1.29
SH3RF3-201ENST00000309415 HSPG2P98160 4391 aa6.97□□□□□ -1.29
SH3RF3-201ENST00000309415 LYSTQ99698 3801 aa6.93□□□□□ -1.3
SH3RF3-201ENST00000309415 LCE3DQ9BYE3 92 aa6.92□□□□□ -1.3
SH3RF3-201ENST00000309415 LCE2DQ5TA82 110 aaPredicted RBP6.91□□□□□ -1.3
SH3RF3-201ENST00000309415 KRTAP19-3Q7Z4W3 81 aa6.89□□□□□ -1.31
SH3RF3-201ENST00000309415 KIAA1109Q2LD37 5005 aa6.88□□□□□ -1.31
SH3RF3-201ENST00000309415 PKHD1L1Q86WI1 4243 aa6.87□□□□□ -1.31
SH3RF3-201ENST00000309415 BIRC6Q9NR09 4857 aa6.83□□□□□ -1.32
SH3RF3-201ENST00000309415 PKD1P98161 4303 aa6.83□□□□□ -1.32
SH3RF3-201ENST00000309415 MYCBP2O75592 4640 aa6.81□□□□□ -1.32
SH3RF3-201ENST00000309415 LCE3EQ5T5B0 92 aa6.79□□□□□ -1.32
SH3RF3-201ENST00000309415 FRAS1Q86XX4 4008 aa6.74□□□□□ -1.33
SH3RF3-201ENST00000309415 HERC2O95714 4834 aa6.71□□□□□ -1.33
SH3RF3-201ENST00000309415 MT1LQ93083 61 aa6.71□□□□□ -1.33
SH3RF3-201ENST00000309415 KRTAP9-2Q9BYQ4 174 aa6.68□□□□□ -1.34
SH3RF3-201ENST00000309415 MT1EP04732 61 aa6.67□□□□□ -1.34
SH3RF3-201ENST00000309415 PCLOQ9Y6V0 5065 aa6.67□□□□□ -1.34
SH3RF3-201ENST00000309415 MT4P47944 62 aa6.67□□□□□ -1.34
SH3RF3-201ENST00000309415 KRTAP4-7Q9BYR0 210 aa6.64□□□□□ -1.35
SH3RF3-201ENST00000309415 HECTD4Q9Y4D8 3996 aa6.6□□□□□ -1.35
SH3RF3-201ENST00000309415 SPRR5A0A1B0GTR4 108 aa6.59□□□□□ -1.35
SH3RF3-201ENST00000309415 KRTAP19-6Q3LI70 58 aa6.55□□□□□ -1.36
SH3RF3-201ENST00000309415 MT3P25713 68 aa6.54□□□□□ -1.36
SH3RF3-201ENST00000309415 KRTAP19-2Q3LHN2 52 aa6.52□□□□□ -1.37
SH3RF3-201ENST00000309415 MT1MQ8N339 61 aa6.52□□□□□ -1.37
SH3RF3-201ENST00000309415 LPAP08519 4548 aa6.43□□□□□ -1.38
SH3RF3-201ENST00000309415 LRP2P98164 4655 aa6.42□□□□□ -1.38
SH3RF3-201ENST00000309415 KRTAP9-6A0A140TA67 174 aa6.42□□□□□ -1.38
SH3RF3-201ENST00000309415 PKHD1P08F94 4074 aa6.37□□□□□ -1.39
SH3RF3-201ENST00000309415 LCE1BQ5T7P3 118 aa6.35□□□□□ -1.39
SH3RF3-201ENST00000309415 EPPK1P58107 5090 aaKnown RBP6.33□□□□□ -1.4
SH3RF3-201ENST00000309415 LCE1DQ5T752 114 aa6.32□□□□□ -1.4
SH3RF3-201ENST00000309415 HYDINQ4G0P3 5121 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms