RNA–Protein interactions for RNA: ENST00000302787.2

LETM1-201, Transcript of leucine zipper and EF-hand containing transmembrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LETM1, Length 5,462 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM1-201ENST00000302787 LCE3AQ5TA76 89 aa9.01□□□□□ -0.97
LETM1-201ENST00000302787 CRCT1Q9UGL9 99 aa8.94□□□□□ -0.98
LETM1-201ENST00000302787 DNAH5Q8TE73 4624 aa8.93□□□□□ -0.98
LETM1-201ENST00000302787 CSMD3Q7Z407 3707 aa8.92□□□□□ -0.98
LETM1-201ENST00000302787 DNAH1Q9P2D7 4330 aa8.91□□□□□ -0.98
LETM1-201ENST00000302787 AKAP9Q99996 3911 aa8.84□□□□□ -0.99
LETM1-201ENST00000302787 DNAH10Q8IVF4 4471 aa8.83□□□□□ -1
LETM1-201ENST00000302787 PLECQ15149 4684 aaKnown RBP8.79□□□□□ -1
LETM1-201ENST00000302787 ZNF469Q96JG9 3925 aaPredicted RBP8.75□□□□□ -1.01
LETM1-201ENST00000302787 DNAH11Q96DT5 4516 aa8.71□□□□□ -1.02
LETM1-201ENST00000302787 DNAH17Q9UFH2 4485 aa8.71□□□□□ -1.02
LETM1-201ENST00000302787 DNAH2Q9P225 4427 aa8.69□□□□□ -1.02
LETM1-201ENST00000302787 VPS13DQ5THJ4 4388 aa8.65□□□□□ -1.02
LETM1-201ENST00000302787 KRTAP4-1Q9BYQ7 146 aa8.64□□□□□ -1.03
LETM1-201ENST00000302787 DYNC1H1Q14204 4646 aaKnown RBP8.48□□□□□ -1.05
LETM1-201ENST00000302787 MT1HP80294 61 aa8.43□□□□□ -1.06
LETM1-201ENST00000302787 DNAH3Q8TD57 4116 aa8.43□□□□□ -1.06
LETM1-201ENST00000302787 KRTAP8-1Q8IUC2 63 aa8.43□□□□□ -1.06
LETM1-201ENST00000302787 LRP1BQ9NZR2 4599 aa8.41□□□□□ -1.06
LETM1-201ENST00000302787 SACSQ9NZJ4 4579 aa8.38□□□□□ -1.07
LETM1-201ENST00000302787 KRTAP10-5P60370 271 aa8.36□□□□□ -1.07
LETM1-201ENST00000302787 SPRR2GQ9BYE4 73 aa8.36□□□□□ -1.07
LETM1-201ENST00000302787 STARD9Q9P2P6 4700 aa8.35□□□□□ -1.07
LETM1-201ENST00000302787 MT2AP02795 61 aa8.35□□□□□ -1.07
LETM1-201ENST00000302787 DNAH8Q96JB1 4490 aa8.34□□□□□ -1.07
LETM1-201ENST00000302787 FAT1Q14517 4588 aa8.33□□□□□ -1.08
LETM1-201ENST00000302787 DNHD1Q96M86 4753 aa8.33□□□□□ -1.08
LETM1-201ENST00000302787 DYNC2H1Q8NCM8 4307 aaKnown RBP8.32□□□□□ -1.08
LETM1-201ENST00000302787 FAT2Q9NYQ8 4349 aa8.28□□□□□ -1.08
LETM1-201ENST00000302787 MT1FP04733 61 aa8.19□□□□□ -1.1
LETM1-201ENST00000302787 ANK2Q01484 3957 aa8.17□□□□□ -1.1
LETM1-201ENST00000302787 RYR1P21817 5038 aa8.16□□□□□ -1.1
LETM1-201ENST00000302787 APOBP04114 4563 aaKnown RBP8.12□□□□□ -1.11
LETM1-201ENST00000302787 KRTAP19-5Q3LI72 72 aa8.06□□□□□ -1.12
LETM1-201ENST00000302787 VPS13BQ7Z7G8 4022 aa8.01□□□□□ -1.13
LETM1-201ENST00000302787 KMT2AQ03164 3969 aa7.99□□□□□ -1.13
LETM1-201ENST00000302787 PRKDCP78527 4128 aaKnown RBP7.98□□□□□ -1.13
LETM1-201ENST00000302787 LCE3CQ5T5A8 94 aa7.96□□□□□ -1.13
LETM1-201ENST00000302787 DNAH6Q9C0G6 4158 aa7.86□□□□□ -1.15
LETM1-201ENST00000302787 RYR3Q15413 4870 aa7.83□□□□□ -1.16
LETM1-201ENST00000302787 DNAH7Q8WXX0 4024 aa7.81□□□□□ -1.16
LETM1-201ENST00000302787 SPRR2FQ96RM1 72 aa7.8□□□□□ -1.16
LETM1-201ENST00000302787 FRAS1Q86XX4 4008 aa7.79□□□□□ -1.16
LETM1-201ENST00000302787 LYSTQ99698 3801 aa7.78□□□□□ -1.16
LETM1-201ENST00000302787 KRTAP17-1Q9BYP8 105 aa7.78□□□□□ -1.16
LETM1-201ENST00000302787 KRTAP19-1Q8IUB9 90 aa7.78□□□□□ -1.16
LETM1-201ENST00000302787 KRTAP10-7P60409 375 aaPredicted RBP7.75□□□□□ -1.17
LETM1-201ENST00000302787 KRTAP19-8Q3LI54 63 aa7.75□□□□□ -1.17
LETM1-201ENST00000302787 MYCBP2O75592 4640 aa7.75□□□□□ -1.17
LETM1-201ENST00000302787 FAT3Q8TDW7 4589 aa7.74□□□□□ -1.17
LETM1-201ENST00000302787 CMYA5Q8N3K9 4069 aa7.73□□□□□ -1.17
LETM1-201ENST00000302787 KRTAP19-4Q3LI73 84 aa7.71□□□□□ -1.18
LETM1-201ENST00000302787 HECTD4Q9Y4D8 3996 aa7.67□□□□□ -1.18
LETM1-201ENST00000302787 RYR2Q92736 4967 aa7.62□□□□□ -1.19
LETM1-201ENST00000302787 MT1XP80297 61 aa7.6□□□□□ -1.19
LETM1-201ENST00000302787 KIAA1109Q2LD37 5005 aa7.6□□□□□ -1.19
LETM1-201ENST00000302787 LRP1Q07954 4544 aaKnown RBP7.58□□□□□ -1.2
LETM1-201ENST00000302787 MT1BP07438 61 aa7.5□□□□□ -1.21
LETM1-201ENST00000302787 KRTAP9-8Q9BYQ0 159 aa7.44□□□□□ -1.22
LETM1-201ENST00000302787 SPRR5A0A1B0GTR4 108 aa7.38□□□□□ -1.23
LETM1-201ENST00000302787 HERC1Q15751 4861 aa7.38□□□□□ -1.23
LETM1-201ENST00000302787 HSPG2P98160 4391 aa7.35□□□□□ -1.23
LETM1-201ENST00000302787 LCE2CQ5TA81 110 aa7.32□□□□□ -1.24
LETM1-201ENST00000302787 LCE3BQ5TA77 95 aa7.31□□□□□ -1.24
LETM1-201ENST00000302787 MT1GP13640 62 aa7.3□□□□□ -1.24
LETM1-201ENST00000302787 KRTAP4-8A0A0G2JLE6 195 aa7.28□□□□□ -1.24
LETM1-201ENST00000302787 KRTAP4-8Q9BYQ9 185 aa7.28□□□□□ -1.24
LETM1-201ENST00000302787 SPRR2EP22531 72 aa7.27□□□□□ -1.25
LETM1-201ENST00000302787 SPRR2BP35325 72 aa7.27□□□□□ -1.25
LETM1-201ENST00000302787 SPRR2AP35326 72 aa7.27□□□□□ -1.25
LETM1-201ENST00000302787 KRTAP9-3Q9BYQ3 159 aa7.26□□□□□ -1.25
LETM1-201ENST00000302787 HYDINQ4G0P3 5121 aa7.26□□□□□ -1.25
LETM1-201ENST00000302787 PKD1P98161 4303 aa7.26□□□□□ -1.25
LETM1-201ENST00000302787 LRP2P98164 4655 aa7.21□□□□□ -1.26
LETM1-201ENST00000302787 KRTAP12-4P60329 112 aa7.2□□□□□ -1.26
LETM1-201ENST00000302787 HERC2O95714 4834 aa7.19□□□□□ -1.26
LETM1-201ENST00000302787 LPAP08519 4548 aa7.07□□□□□ -1.28
LETM1-201ENST00000302787 PKHD1L1Q86WI1 4243 aa7.07□□□□□ -1.28
LETM1-201ENST00000302787 PKHD1P08F94 4074 aa7.07□□□□□ -1.28
LETM1-201ENST00000302787 BIRC6Q9NR09 4857 aa7.04□□□□□ -1.28
LETM1-201ENST00000302787 LCE2BO14633 110 aa7.03□□□□□ -1.28
LETM1-201ENST00000302787 SPRR2DP22532 72 aa7.02□□□□□ -1.29
LETM1-201ENST00000302787 KRTAP19-2Q3LHN2 52 aa7□□□□□ -1.29
LETM1-201ENST00000302787 PCLOQ9Y6V0 5065 aa7□□□□□ -1.29
LETM1-201ENST00000302787 TNXBP22105 4242 aa6.95□□□□□ -1.3
LETM1-201ENST00000302787 KMT2CQ8NEZ4 4911 aaKnown RBP6.93□□□□□ -1.3
LETM1-201ENST00000302787 LCE3DQ9BYE3 92 aa6.92□□□□□ -1.3
LETM1-201ENST00000302787 KRTAP4-7Q9BYR0 210 aa6.91□□□□□ -1.3
LETM1-201ENST00000302787 MT1LQ93083 61 aa6.89□□□□□ -1.31
LETM1-201ENST00000302787 KRTAP19-3Q7Z4W3 81 aa6.87□□□□□ -1.31
LETM1-201ENST00000302787 MUC17Q685J3 4493 aa6.84□□□□□ -1.31
LETM1-201ENST00000302787 MT1EP04732 61 aa6.82□□□□□ -1.32
LETM1-201ENST00000302787 LCE3EQ5T5B0 92 aa6.82□□□□□ -1.32
LETM1-201ENST00000302787 FLGP20930 4061 aaPredicted RBP6.81□□□□□ -1.32
LETM1-201ENST00000302787 MT1MQ8N339 61 aa6.6□□□□□ -1.35
LETM1-201ENST00000302787 ABCA13Q86UQ4 5058 aa6.57□□□□□ -1.36
LETM1-201ENST00000302787 LOC100996750A0A140TA64 210 aa6.51□□□□□ -1.37
LETM1-201ENST00000302787 EPPK1P58107 5090 aaKnown RBP6.5□□□□□ -1.37
LETM1-201ENST00000302787 KRTAP19-6Q3LI70 58 aa6.49□□□□□ -1.37
LETM1-201ENST00000302787 KRTAP4-3Q9BYR4 195 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 164.5 ms