RNA–Protein interactions for RNA: ENST00000301364.9

TSR1-201, Transcript of TSR1, ribosome maturation factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSR1, Length 5,188 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-201ENST00000301364 DNAH5Q8TE73 4624 aa8.48□□□□□ -1.05
TSR1-201ENST00000301364 PLECQ15149 4684 aaKnown RBP8.45□□□□□ -1.06
TSR1-201ENST00000301364 LORP23490 312 aaPredicted RBP8.38□□□□□ -1.07
TSR1-201ENST00000301364 DNAH11Q96DT5 4516 aa8.37□□□□□ -1.07
TSR1-201ENST00000301364 KRTAP10-12P60413 245 aa8.36□□□□□ -1.07
TSR1-201ENST00000301364 DNAH10Q8IVF4 4471 aa8.35□□□□□ -1.07
TSR1-201ENST00000301364 DNAH17Q9UFH2 4485 aa8.34□□□□□ -1.07
TSR1-201ENST00000301364 VPS13DQ5THJ4 4388 aa8.34□□□□□ -1.07
TSR1-201ENST00000301364 INE1O15225 51 aa8.32□□□□□ -1.08
TSR1-201ENST00000301364 KRTAP12-3P60328 96 aa8.21□□□□□ -1.09
TSR1-201ENST00000301364 LCE3AQ5TA76 89 aa8.17□□□□□ -1.1
TSR1-201ENST00000301364 DNAH2Q9P225 4427 aa8.11□□□□□ -1.11
TSR1-201ENST00000301364 DYNC1H1Q14204 4646 aaKnown RBP8.09□□□□□ -1.12
TSR1-201ENST00000301364 STARD9Q9P2P6 4700 aa8.08□□□□□ -1.12
TSR1-201ENST00000301364 DNAH3Q8TD57 4116 aa8.06□□□□□ -1.12
TSR1-201ENST00000301364 DNAH8Q96JB1 4490 aa8.05□□□□□ -1.12
TSR1-201ENST00000301364 KRTAP4-1Q9BYQ7 146 aa8.05□□□□□ -1.12
TSR1-201ENST00000301364 DNHD1Q96M86 4753 aa8.04□□□□□ -1.12
TSR1-201ENST00000301364 LRP1BQ9NZR2 4599 aa8.04□□□□□ -1.12
TSR1-201ENST00000301364 FAT1Q14517 4588 aa8□□□□□ -1.13
TSR1-201ENST00000301364 SACSQ9NZJ4 4579 aa7.98□□□□□ -1.13
TSR1-201ENST00000301364 DYNC2H1Q8NCM8 4307 aaKnown RBP7.97□□□□□ -1.13
TSR1-201ENST00000301364 FAT2Q9NYQ8 4349 aa7.85□□□□□ -1.15
TSR1-201ENST00000301364 SPRR2GQ9BYE4 73 aa7.83□□□□□ -1.16
TSR1-201ENST00000301364 ANK2Q01484 3957 aa7.81□□□□□ -1.16
TSR1-201ENST00000301364 PRKDCP78527 4128 aaKnown RBP7.78□□□□□ -1.16
TSR1-201ENST00000301364 MT1HP80294 61 aa7.76□□□□□ -1.17
TSR1-201ENST00000301364 RYR1P21817 5038 aa7.75□□□□□ -1.17
TSR1-201ENST00000301364 KMT2AQ03164 3969 aa7.74□□□□□ -1.17
TSR1-201ENST00000301364 VPS13BQ7Z7G8 4022 aa7.71□□□□□ -1.17
TSR1-201ENST00000301364 MT2AP02795 61 aa7.71□□□□□ -1.18
TSR1-201ENST00000301364 CRCT1Q9UGL9 99 aa7.71□□□□□ -1.18
TSR1-201ENST00000301364 APOBP04114 4563 aaKnown RBP7.71□□□□□ -1.18
TSR1-201ENST00000301364 MT1FP04733 61 aa7.56□□□□□ -1.2
TSR1-201ENST00000301364 LYSTQ99698 3801 aa7.54□□□□□ -1.2
TSR1-201ENST00000301364 DNAH6Q9C0G6 4158 aa7.52□□□□□ -1.21
TSR1-201ENST00000301364 MYCBP2O75592 4640 aa7.52□□□□□ -1.21
TSR1-201ENST00000301364 KRTAP8-1Q8IUC2 63 aa7.51□□□□□ -1.21
TSR1-201ENST00000301364 HECTD4Q9Y4D8 3996 aa7.48□□□□□ -1.21
TSR1-201ENST00000301364 FRAS1Q86XX4 4008 aa7.48□□□□□ -1.21
TSR1-201ENST00000301364 CMYA5Q8N3K9 4069 aa7.46□□□□□ -1.21
TSR1-201ENST00000301364 KIAA1109Q2LD37 5005 aa7.45□□□□□ -1.22
TSR1-201ENST00000301364 KRTAP17-1Q9BYP8 105 aa7.43□□□□□ -1.22
TSR1-201ENST00000301364 DNAH7Q8WXX0 4024 aa7.4□□□□□ -1.23
TSR1-201ENST00000301364 RYR3Q15413 4870 aa7.39□□□□□ -1.23
TSR1-201ENST00000301364 FAT3Q8TDW7 4589 aa7.36□□□□□ -1.23
TSR1-201ENST00000301364 KRTAP19-1Q8IUB9 90 aa7.35□□□□□ -1.23
TSR1-201ENST00000301364 LRP1Q07954 4544 aaKnown RBP7.35□□□□□ -1.23
TSR1-201ENST00000301364 KRTAP10-5P60370 271 aa7.34□□□□□ -1.23
TSR1-201ENST00000301364 RYR2Q92736 4967 aa7.34□□□□□ -1.23
TSR1-201ENST00000301364 KRTAP19-5Q3LI72 72 aa7.32□□□□□ -1.24
TSR1-201ENST00000301364 KRTAP19-8Q3LI54 63 aa7.32□□□□□ -1.24
TSR1-201ENST00000301364 LCE3CQ5T5A8 94 aa7.29□□□□□ -1.24
TSR1-201ENST00000301364 KRTAP19-4Q3LI73 84 aa7.27□□□□□ -1.25
TSR1-201ENST00000301364 KRTAP10-7P60409 375 aaPredicted RBP7.12□□□□□ -1.27
TSR1-201ENST00000301364 SPRR5A0A1B0GTR4 108 aa7.1□□□□□ -1.27
TSR1-201ENST00000301364 MT1XP80297 61 aa7.09□□□□□ -1.27
TSR1-201ENST00000301364 HYDINQ4G0P3 5121 aa7.07□□□□□ -1.28
TSR1-201ENST00000301364 LRP2P98164 4655 aa7.05□□□□□ -1.28
TSR1-201ENST00000301364 MT1BP07438 61 aa7.04□□□□□ -1.28
TSR1-201ENST00000301364 KRTAP9-8Q9BYQ0 159 aa7.02□□□□□ -1.29
TSR1-201ENST00000301364 LCE2CQ5TA81 110 aa6.99□□□□□ -1.29
TSR1-201ENST00000301364 HSPG2P98160 4391 aa6.97□□□□□ -1.29
TSR1-201ENST00000301364 PKHD1P08F94 4074 aa6.95□□□□□ -1.3
TSR1-201ENST00000301364 HERC2O95714 4834 aa6.95□□□□□ -1.3
TSR1-201ENST00000301364 SPRR2FQ96RM1 72 aa6.92□□□□□ -1.3
TSR1-201ENST00000301364 PKD1P98161 4303 aa6.89□□□□□ -1.31
TSR1-201ENST00000301364 KRTAP19-2Q3LHN2 52 aa6.83□□□□□ -1.32
TSR1-201ENST00000301364 KRTAP9-3Q9BYQ3 159 aa6.83□□□□□ -1.32
TSR1-201ENST00000301364 HERC1Q15751 4861 aa6.8□□□□□ -1.32
TSR1-201ENST00000301364 PKHD1L1Q86WI1 4243 aa6.78□□□□□ -1.32
TSR1-201ENST00000301364 KMT2CQ8NEZ4 4911 aaKnown RBP6.75□□□□□ -1.33
TSR1-201ENST00000301364 BIRC6Q9NR09 4857 aa6.69□□□□□ -1.34
TSR1-201ENST00000301364 TNXBP22105 4242 aa6.69□□□□□ -1.34
TSR1-201ENST00000301364 LPAP08519 4548 aa6.69□□□□□ -1.34
TSR1-201ENST00000301364 KRTAP4-8A0A0G2JLE6 195 aa6.67□□□□□ -1.34
TSR1-201ENST00000301364 KRTAP4-8Q9BYQ9 185 aa6.67□□□□□ -1.34
TSR1-201ENST00000301364 MUC17Q685J3 4493 aa6.65□□□□□ -1.34
TSR1-201ENST00000301364 PCLOQ9Y6V0 5065 aa6.62□□□□□ -1.35
TSR1-201ENST00000301364 MT1GP13640 62 aa6.56□□□□□ -1.36
TSR1-201ENST00000301364 FLGP20930 4061 aaPredicted RBP6.56□□□□□ -1.36
TSR1-201ENST00000301364 KRTAP12-4P60329 112 aa6.51□□□□□ -1.37
TSR1-201ENST00000301364 LCE3BQ5TA77 95 aa6.48□□□□□ -1.37
TSR1-201ENST00000301364 LCE2BO14633 110 aa6.46□□□□□ -1.38
TSR1-201ENST00000301364 MT1LQ93083 61 aa6.4□□□□□ -1.39
TSR1-201ENST00000301364 SPRR2EP22531 72 aa6.38□□□□□ -1.39
TSR1-201ENST00000301364 SPRR2BP35325 72 aa6.38□□□□□ -1.39
TSR1-201ENST00000301364 SPRR2AP35326 72 aa6.38□□□□□ -1.39
TSR1-201ENST00000301364 MT1EP04732 61 aa6.34□□□□□ -1.39
TSR1-201ENST00000301364 KRTAP19-3Q7Z4W3 81 aa6.32□□□□□ -1.4
TSR1-201ENST00000301364 ABCA13Q86UQ4 5058 aa6.32□□□□□ -1.4
TSR1-201ENST00000301364 KRTAP4-7Q9BYR0 210 aa6.31□□□□□ -1.4
TSR1-201ENST00000301364 LCE3DQ9BYE3 92 aa6.24□□□□□ -1.41
TSR1-201ENST00000301364 EPPK1P58107 5090 aaKnown RBP6.22□□□□□ -1.41
TSR1-201ENST00000301364 LCE3EQ5T5B0 92 aa6.17□□□□□ -1.42
TSR1-201ENST00000301364 SPRR2DP22532 72 aa6.16□□□□□ -1.42
TSR1-201ENST00000301364 KRTAP19-6Q3LI70 58 aa6.09□□□□□ -1.43
TSR1-201ENST00000301364 MT1MQ8N339 61 aa6.09□□□□□ -1.44
TSR1-201ENST00000301364 FAT4Q6V0I7 4981 aa6.08□□□□□ -1.44
TSR1-201ENST00000301364 HMCN2Q8NDA2 5059 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms