RNA–Protein interactions for RNA: ENST00000286627.10

KCNMA1-201, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene KCNMA1, Length 6,194 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-201ENST00000286627 DNAH5Q8TE73 4624 aa6.93□□□□□ -1.3
KCNMA1-201ENST00000286627 DNAH9Q9NYC9 4486 aa6.89□□□□□ -1.31
KCNMA1-201ENST00000286627 VPS13CQ709C8 3753 aa6.85□□□□□ -1.31
KCNMA1-201ENST00000286627 PLECQ15149 4684 aaKnown RBP6.83□□□□□ -1.32
KCNMA1-201ENST00000286627 DNAH10Q8IVF4 4471 aa6.76□□□□□ -1.33
KCNMA1-201ENST00000286627 KRTAP4-1Q9BYQ7 146 aa6.75□□□□□ -1.33
KCNMA1-201ENST00000286627 DNAH11Q96DT5 4516 aa6.72□□□□□ -1.33
KCNMA1-201ENST00000286627 DNAH1Q9P2D7 4330 aa6.71□□□□□ -1.33
KCNMA1-201ENST00000286627 CSMD3Q7Z407 3707 aa6.67□□□□□ -1.34
KCNMA1-201ENST00000286627 KRTAP8-1Q8IUC2 63 aa6.67□□□□□ -1.34
KCNMA1-201ENST00000286627 MT1HP80294 61 aa6.65□□□□□ -1.35
KCNMA1-201ENST00000286627 DNHD1Q96M86 4753 aa6.64□□□□□ -1.35
KCNMA1-201ENST00000286627 KRTAP10-5P60370 271 aa6.62□□□□□ -1.35
KCNMA1-201ENST00000286627 DNAH2Q9P225 4427 aa6.61□□□□□ -1.35
KCNMA1-201ENST00000286627 DNAH17Q9UFH2 4485 aa6.6□□□□□ -1.35
KCNMA1-201ENST00000286627 SPRR2GQ9BYE4 73 aa6.6□□□□□ -1.35
KCNMA1-201ENST00000286627 MT2AP02795 61 aa6.59□□□□□ -1.35
KCNMA1-201ENST00000286627 VPS13DQ5THJ4 4388 aa6.59□□□□□ -1.35
KCNMA1-201ENST00000286627 DYNC1H1Q14204 4646 aaKnown RBP6.58□□□□□ -1.36
KCNMA1-201ENST00000286627 FAT1Q14517 4588 aa6.57□□□□□ -1.36
KCNMA1-201ENST00000286627 ZNF469Q96JG9 3925 aaPredicted RBP6.57□□□□□ -1.36
KCNMA1-201ENST00000286627 AKAP9Q99996 3911 aa6.52□□□□□ -1.37
KCNMA1-201ENST00000286627 LRP1BQ9NZR2 4599 aa6.47□□□□□ -1.37
KCNMA1-201ENST00000286627 RYR1P21817 5038 aa6.46□□□□□ -1.38
KCNMA1-201ENST00000286627 MT1FP04733 61 aa6.43□□□□□ -1.38
KCNMA1-201ENST00000286627 SACSQ9NZJ4 4579 aa6.4□□□□□ -1.38
KCNMA1-201ENST00000286627 DNAH8Q96JB1 4490 aa6.38□□□□□ -1.39
KCNMA1-201ENST00000286627 STARD9Q9P2P6 4700 aa6.35□□□□□ -1.39
KCNMA1-201ENST00000286627 DYNC2H1Q8NCM8 4307 aaKnown RBP6.34□□□□□ -1.39
KCNMA1-201ENST00000286627 FAT2Q9NYQ8 4349 aa6.33□□□□□ -1.4
KCNMA1-201ENST00000286627 SPRR2FQ96RM1 72 aa6.28□□□□□ -1.4
KCNMA1-201ENST00000286627 KRTAP19-5Q3LI72 72 aa6.25□□□□□ -1.41
KCNMA1-201ENST00000286627 APOBP04114 4563 aaKnown RBP6.23□□□□□ -1.41
KCNMA1-201ENST00000286627 KRTAP19-4Q3LI73 84 aa6.23□□□□□ -1.41
KCNMA1-201ENST00000286627 DNAH3Q8TD57 4116 aa6.23□□□□□ -1.41
KCNMA1-201ENST00000286627 LCE3CQ5T5A8 94 aa6.18□□□□□ -1.42
KCNMA1-201ENST00000286627 KRTAP19-8Q3LI54 63 aa6.16□□□□□ -1.42
KCNMA1-201ENST00000286627 KRTAP10-7P60409 375 aaPredicted RBP6.15□□□□□ -1.43
KCNMA1-201ENST00000286627 RYR3Q15413 4870 aa6.13□□□□□ -1.43
KCNMA1-201ENST00000286627 KIAA1109Q2LD37 5005 aa6.13□□□□□ -1.43
KCNMA1-201ENST00000286627 KRTAP19-1Q8IUB9 90 aa6.12□□□□□ -1.43
KCNMA1-201ENST00000286627 PRKDCP78527 4128 aaKnown RBP6.12□□□□□ -1.43
KCNMA1-201ENST00000286627 KRTAP17-1Q9BYP8 105 aa6.07□□□□□ -1.44
KCNMA1-201ENST00000286627 ANK2Q01484 3957 aa6.04□□□□□ -1.44
KCNMA1-201ENST00000286627 VPS13BQ7Z7G8 4022 aa6.03□□□□□ -1.44
KCNMA1-201ENST00000286627 MYCBP2O75592 4640 aa6.01□□□□□ -1.45
KCNMA1-201ENST00000286627 RYR2Q92736 4967 aa6.01□□□□□ -1.45
KCNMA1-201ENST00000286627 FAT3Q8TDW7 4589 aa5.98□□□□□ -1.45
KCNMA1-201ENST00000286627 KMT2AQ03164 3969 aa5.98□□□□□ -1.45
KCNMA1-201ENST00000286627 LRP1Q07954 4544 aaKnown RBP5.98□□□□□ -1.45
KCNMA1-201ENST00000286627 SPRR2EP22531 72 aa5.97□□□□□ -1.45
KCNMA1-201ENST00000286627 SPRR2BP35325 72 aa5.97□□□□□ -1.45
KCNMA1-201ENST00000286627 SPRR2AP35326 72 aa5.97□□□□□ -1.45
KCNMA1-201ENST00000286627 MT1XP80297 61 aa5.93□□□□□ -1.46
KCNMA1-201ENST00000286627 LYSTQ99698 3801 aa5.91□□□□□ -1.46
KCNMA1-201ENST00000286627 MT1BP07438 61 aa5.9□□□□□ -1.47
KCNMA1-201ENST00000286627 DNAH6Q9C0G6 4158 aa5.88□□□□□ -1.47
KCNMA1-201ENST00000286627 KRTAP9-8Q9BYQ0 159 aa5.88□□□□□ -1.47
KCNMA1-201ENST00000286627 DNAH7Q8WXX0 4024 aa5.8□□□□□ -1.48
KCNMA1-201ENST00000286627 HERC1Q15751 4861 aa5.8□□□□□ -1.48
KCNMA1-201ENST00000286627 LCE2CQ5TA81 110 aa5.79□□□□□ -1.48
KCNMA1-201ENST00000286627 HERC2O95714 4834 aa5.77□□□□□ -1.49
KCNMA1-201ENST00000286627 SPRR2DP22532 72 aa5.76□□□□□ -1.49
KCNMA1-201ENST00000286627 KRTAP9-3Q9BYQ3 159 aa5.75□□□□□ -1.49
KCNMA1-201ENST00000286627 CMYA5Q8N3K9 4069 aa5.74□□□□□ -1.49
KCNMA1-201ENST00000286627 LCE3BQ5TA77 95 aa5.73□□□□□ -1.49
KCNMA1-201ENST00000286627 HSPG2P98160 4391 aa5.72□□□□□ -1.49
KCNMA1-201ENST00000286627 PKD1P98161 4303 aa5.68□□□□□ -1.5
KCNMA1-201ENST00000286627 SPRR5A0A1B0GTR4 108 aa5.68□□□□□ -1.5
KCNMA1-201ENST00000286627 MT1GP13640 62 aa5.68□□□□□ -1.5
KCNMA1-201ENST00000286627 BIRC6Q9NR09 4857 aa5.68□□□□□ -1.5
KCNMA1-201ENST00000286627 HECTD4Q9Y4D8 3996 aa5.65□□□□□ -1.51
KCNMA1-201ENST00000286627 KRTAP4-8A0A0G2JLE6 195 aa5.65□□□□□ -1.51
KCNMA1-201ENST00000286627 KRTAP4-8Q9BYQ9 185 aa5.65□□□□□ -1.51
KCNMA1-201ENST00000286627 PCLOQ9Y6V0 5065 aa5.64□□□□□ -1.51
KCNMA1-201ENST00000286627 LRP2P98164 4655 aa5.64□□□□□ -1.51
KCNMA1-201ENST00000286627 LCE2BO14633 110 aa5.61□□□□□ -1.51
KCNMA1-201ENST00000286627 FRAS1Q86XX4 4008 aa5.59□□□□□ -1.51
KCNMA1-201ENST00000286627 KRTAP12-4P60329 112 aa5.55□□□□□ -1.52
KCNMA1-201ENST00000286627 KRTAP19-2Q3LHN2 52 aa5.53□□□□□ -1.52
KCNMA1-201ENST00000286627 HYDINQ4G0P3 5121 aa5.46□□□□□ -1.54
KCNMA1-201ENST00000286627 KRTAP19-3Q7Z4W3 81 aa5.44□□□□□ -1.54
KCNMA1-201ENST00000286627 PKHD1L1Q86WI1 4243 aa5.44□□□□□ -1.54
KCNMA1-201ENST00000286627 MT1LQ93083 61 aa5.4□□□□□ -1.55
KCNMA1-201ENST00000286627 LCE3DQ9BYE3 92 aa5.39□□□□□ -1.55
KCNMA1-201ENST00000286627 EPPK1P58107 5090 aaKnown RBP5.38□□□□□ -1.55
KCNMA1-201ENST00000286627 MT1EP04732 61 aa5.36□□□□□ -1.55
KCNMA1-201ENST00000286627 MUC17Q685J3 4493 aa5.35□□□□□ -1.55
KCNMA1-201ENST00000286627 PKHD1P08F94 4074 aa5.33□□□□□ -1.56
KCNMA1-201ENST00000286627 LCE3EQ5T5B0 92 aa5.32□□□□□ -1.56
KCNMA1-201ENST00000286627 KMT2CQ8NEZ4 4911 aaKnown RBP5.32□□□□□ -1.56
KCNMA1-201ENST00000286627 KRTAP4-7Q9BYR0 210 aa5.29□□□□□ -1.56
KCNMA1-201ENST00000286627 LPAP08519 4548 aa5.28□□□□□ -1.56
KCNMA1-201ENST00000286627 LCE2DQ5TA82 110 aaPredicted RBP5.28□□□□□ -1.56
KCNMA1-201ENST00000286627 ABCA13Q86UQ4 5058 aa5.26□□□□□ -1.57
KCNMA1-201ENST00000286627 MT4P47944 62 aa5.25□□□□□ -1.57
KCNMA1-201ENST00000286627 FLGP20930 4061 aaPredicted RBP5.24□□□□□ -1.57
KCNMA1-201ENST00000286627 KRTAP19-6Q3LI70 58 aa5.23□□□□□ -1.57
KCNMA1-201ENST00000286627 MT1MQ8N339 61 aa5.19□□□□□ -1.58
KCNMA1-201ENST00000286627 SYNE1Q8NF91 8797 aaKnown RBP5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms