RNA–Protein interactions for RNA: ENST00000277541.6

NOTCH1-201, Transcript of notch 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH1, Length 9,371 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH1-201ENST00000277541 CRCT1Q9UGL9 99 aa5.83□□□□□ -1.48
NOTCH1-201ENST00000277541 DNAH3Q8TD57 4116 aa5.79□□□□□ -1.48
NOTCH1-201ENST00000277541 CMYA5Q8N3K9 4069 aa5.78□□□□□ -1.48
NOTCH1-201ENST00000277541 HUWE1Q7Z6Z7 4374 aaKnown RBP5.76□□□□□ -1.49
NOTCH1-201ENST00000277541 HECTD4Q9Y4D8 3996 aa5.73□□□□□ -1.49
NOTCH1-201ENST00000277541 KRTAP10-4P60372 401 aaPredicted RBP5.72□□□□□ -1.49
NOTCH1-201ENST00000277541 DNAH7Q8WXX0 4024 aa5.71□□□□□ -1.49
NOTCH1-201ENST00000277541 DNAH2Q9P225 4427 aa5.67□□□□□ -1.5
NOTCH1-201ENST00000277541 ANK2Q01484 3957 aa5.62□□□□□ -1.51
NOTCH1-201ENST00000277541 LORP23490 312 aaPredicted RBP5.6□□□□□ -1.51
NOTCH1-201ENST00000277541 KRTAP10-5P60370 271 aa5.59□□□□□ -1.51
NOTCH1-201ENST00000277541 VPS13BQ7Z7G8 4022 aa5.55□□□□□ -1.52
NOTCH1-201ENST00000277541 FRAS1Q86XX4 4008 aa5.55□□□□□ -1.52
NOTCH1-201ENST00000277541 DNAH1Q9P2D7 4330 aa5.54□□□□□ -1.52
NOTCH1-201ENST00000277541 KMT2AQ03164 3969 aa5.51□□□□□ -1.53
NOTCH1-201ENST00000277541 KRTAP4-5Q9BYR2 181 aa5.49□□□□□ -1.53
NOTCH1-201ENST00000277541 KRTAP8-1Q8IUC2 63 aa5.48□□□□□ -1.53
NOTCH1-201ENST00000277541 KRTAP19-4Q3LI73 84 aa5.47□□□□□ -1.53
NOTCH1-201ENST00000277541 DNAH6Q9C0G6 4158 aa5.47□□□□□ -1.53
NOTCH1-201ENST00000277541 SPRR2GQ9BYE4 73 aa5.31□□□□□ -1.56
NOTCH1-201ENST00000277541 DNAH10Q8IVF4 4471 aa5.27□□□□□ -1.57
NOTCH1-201ENST00000277541 LCE3CQ5T5A8 94 aa5.26□□□□□ -1.57
NOTCH1-201ENST00000277541 DNAH9Q9NYC9 4486 aa5.26□□□□□ -1.57
NOTCH1-201ENST00000277541 KRTAP19-5Q3LI72 72 aa5.18□□□□□ -1.58
NOTCH1-201ENST00000277541 MT1HP80294 61 aa5.18□□□□□ -1.58
NOTCH1-201ENST00000277541 FAT2Q9NYQ8 4349 aa5.15□□□□□ -1.58
NOTCH1-201ENST00000277541 KRTAP10-7P60409 375 aaPredicted RBP5.15□□□□□ -1.59
NOTCH1-201ENST00000277541 KRTAP4-1Q9BYQ7 146 aa5.15□□□□□ -1.59
NOTCH1-201ENST00000277541 DNAH11Q96DT5 4516 aa5.14□□□□□ -1.59
NOTCH1-201ENST00000277541 PRKDCP78527 4128 aaKnown RBP5.13□□□□□ -1.59
NOTCH1-201ENST00000277541 DNAH8Q96JB1 4490 aa5.11□□□□□ -1.59
NOTCH1-201ENST00000277541 MT2AP02795 61 aa5.1□□□□□ -1.59
NOTCH1-201ENST00000277541 DYNC2H1Q8NCM8 4307 aaKnown RBP5.1□□□□□ -1.59
NOTCH1-201ENST00000277541 STARD9Q9P2P6 4700 aa5.07□□□□□ -1.6
NOTCH1-201ENST00000277541 PLECQ15149 4684 aaKnown RBP5.05□□□□□ -1.6
NOTCH1-201ENST00000277541 VPS13DQ5THJ4 4388 aa5.04□□□□□ -1.6
NOTCH1-201ENST00000277541 DNAH5Q8TE73 4624 aa5.03□□□□□ -1.6
NOTCH1-201ENST00000277541 SPRR2FQ96RM1 72 aa5.01□□□□□ -1.61
NOTCH1-201ENST00000277541 FLGP20930 4061 aaPredicted RBP4.99□□□□□ -1.61
NOTCH1-201ENST00000277541 MT1FP04733 61 aa4.99□□□□□ -1.61
NOTCH1-201ENST00000277541 DNAH17Q9UFH2 4485 aa4.95□□□□□ -1.62
NOTCH1-201ENST00000277541 SPRR5A0A1B0GTR4 108 aa4.87□□□□□ -1.63
NOTCH1-201ENST00000277541 KRTAP12-4P60329 112 aa4.84□□□□□ -1.63
NOTCH1-201ENST00000277541 LCE3BQ5TA77 95 aa4.82□□□□□ -1.64
NOTCH1-201ENST00000277541 KRTAP19-8Q3LI54 63 aa4.79□□□□□ -1.64
NOTCH1-201ENST00000277541 LRP1BQ9NZR2 4599 aa4.77□□□□□ -1.65
NOTCH1-201ENST00000277541 PKHD1P08F94 4074 aa4.75□□□□□ -1.65
NOTCH1-201ENST00000277541 KRTAP19-1Q8IUB9 90 aa4.75□□□□□ -1.65
NOTCH1-201ENST00000277541 PKHD1L1Q86WI1 4243 aa4.74□□□□□ -1.65
NOTCH1-201ENST00000277541 MT1XP80297 61 aa4.74□□□□□ -1.65
NOTCH1-201ENST00000277541 SPRR2EP22531 72 aa4.67□□□□□ -1.66
NOTCH1-201ENST00000277541 SPRR2BP35325 72 aa4.67□□□□□ -1.66
NOTCH1-201ENST00000277541 SPRR2AP35326 72 aa4.67□□□□□ -1.66
NOTCH1-201ENST00000277541 MT1GP13640 62 aa4.65□□□□□ -1.67
NOTCH1-201ENST00000277541 DYNC1H1Q14204 4646 aaKnown RBP4.64□□□□□ -1.67
NOTCH1-201ENST00000277541 FAT1Q14517 4588 aa4.63□□□□□ -1.67
NOTCH1-201ENST00000277541 PKD1P98161 4303 aa4.62□□□□□ -1.67
NOTCH1-201ENST00000277541 LRP1Q07954 4544 aaKnown RBP4.61□□□□□ -1.67
NOTCH1-201ENST00000277541 LCE3DQ9BYE3 92 aa4.6□□□□□ -1.67
NOTCH1-201ENST00000277541 APOBP04114 4563 aaKnown RBP4.59□□□□□ -1.67
NOTCH1-201ENST00000277541 LCE2BO14633 110 aa4.58□□□□□ -1.68
NOTCH1-201ENST00000277541 SACSQ9NZJ4 4579 aa4.58□□□□□ -1.68
NOTCH1-201ENST00000277541 SPRR2DP22532 72 aa4.54□□□□□ -1.68
NOTCH1-201ENST00000277541 LCE3EQ5T5B0 92 aa4.54□□□□□ -1.68
NOTCH1-201ENST00000277541 MT1BP07438 61 aa4.52□□□□□ -1.69
NOTCH1-201ENST00000277541 TNXBP22105 4242 aa4.49□□□□□ -1.69
NOTCH1-201ENST00000277541 KRTAP9-8Q9BYQ0 159 aa4.47□□□□□ -1.69
NOTCH1-201ENST00000277541 MYCBP2O75592 4640 aa4.46□□□□□ -1.69
NOTCH1-201ENST00000277541 KRTAP4-8A0A0G2JLE6 195 aa4.41□□□□□ -1.7
NOTCH1-201ENST00000277541 KRTAP4-8Q9BYQ9 185 aa4.41□□□□□ -1.7
NOTCH1-201ENST00000277541 MT3P25713 68 aa4.41□□□□□ -1.7
NOTCH1-201ENST00000277541 MT1LQ93083 61 aa4.39□□□□□ -1.71
NOTCH1-201ENST00000277541 KRTAP9-3Q9BYQ3 159 aa4.37□□□□□ -1.71
NOTCH1-201ENST00000277541 FAT3Q8TDW7 4589 aa4.37□□□□□ -1.71
NOTCH1-201ENST00000277541 KRTAP19-3Q7Z4W3 81 aa4.34□□□□□ -1.71
NOTCH1-201ENST00000277541 HSPG2P98160 4391 aa4.32□□□□□ -1.72
NOTCH1-201ENST00000277541 DNHD1Q96M86 4753 aa4.29□□□□□ -1.72
NOTCH1-201ENST00000277541 PRM1P04553 51 aa4.28□□□□□ -1.72
NOTCH1-201ENST00000277541 LCE2CQ5TA81 110 aa4.27□□□□□ -1.73
NOTCH1-201ENST00000277541 MT1EP04732 61 aa4.26□□□□□ -1.73
NOTCH1-201ENST00000277541 RYR1P21817 5038 aa4.25□□□□□ -1.73
NOTCH1-201ENST00000277541 RYR3Q15413 4870 aa4.25□□□□□ -1.73
NOTCH1-201ENST00000277541 KRTAP17-1Q9BYP8 105 aa4.24□□□□□ -1.73
NOTCH1-201ENST00000277541 KRTAP4-7Q9BYR0 210 aa4.22□□□□□ -1.73
NOTCH1-201ENST00000277541 MT1MQ8N339 61 aa4.13□□□□□ -1.75
NOTCH1-201ENST00000277541 LCE2DQ5TA82 110 aaPredicted RBP4.13□□□□□ -1.75
NOTCH1-201ENST00000277541 LPAP08519 4548 aa4.12□□□□□ -1.75
NOTCH1-201ENST00000277541 LRP2P98164 4655 aa4.12□□□□□ -1.75
NOTCH1-201ENST00000277541 LOC100996750A0A140TA64 210 aa4.06□□□□□ -1.76
NOTCH1-201ENST00000277541 KRTAP2-3P0C7H8 128 aa4.04□□□□□ -1.76
NOTCH1-201ENST00000277541 KRTAP2-4Q9BYR9 128 aa4.04□□□□□ -1.76
NOTCH1-201ENST00000277541 KRTAP2-1Q9BYU5 128 aa4.04□□□□□ -1.76
NOTCH1-201ENST00000277541 KRTAP19-2Q3LHN2 52 aa4.04□□□□□ -1.76
NOTCH1-201ENST00000277541 MT4P47944 62 aa3.98□□□□□ -1.77
NOTCH1-201ENST00000277541 MUC17Q685J3 4493 aa3.98□□□□□ -1.77
NOTCH1-201ENST00000277541 KRTAP19-6Q3LI70 58 aa3.96□□□□□ -1.78
NOTCH1-201ENST00000277541 KMT2CQ8NEZ4 4911 aaKnown RBP3.95□□□□□ -1.78
NOTCH1-201ENST00000277541 LCE1DQ5T752 114 aa3.92□□□□□ -1.78
NOTCH1-201ENST00000277541 LCE1BQ5T7P3 118 aa3.91□□□□□ -1.78
NOTCH1-201ENST00000277541 KRTAP4-3Q9BYR4 195 aa3.9□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 118.5 ms