RNA–Protein interactions for RNA: ENST00000173898.11

TRO-201, Transcript of trophinin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRO, Length 4,647 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRO-201ENST00000173898 PLECQ15149 4684 aaKnown RBP5.12□□□□□ -1.59
TRO-201ENST00000173898 DNAH9Q9NYC9 4486 aa5.11□□□□□ -1.59
TRO-201ENST00000173898 DNHD1Q96M86 4753 aa5.11□□□□□ -1.59
TRO-201ENST00000173898 LCE3AQ5TA76 89 aa5.11□□□□□ -1.59
TRO-201ENST00000173898 KRTAP23-1A1A580 65 aa5.09□□□□□ -1.59
TRO-201ENST00000173898 INE1O15225 51 aa5.09□□□□□ -1.59
TRO-201ENST00000173898 CRCT1Q9UGL9 99 aa5.09□□□□□ -1.59
TRO-201ENST00000173898 DNAH11Q96DT5 4516 aa5.08□□□□□ -1.6
TRO-201ENST00000173898 FAT1Q14517 4588 aa5.04□□□□□ -1.6
TRO-201ENST00000173898 DNAH1Q9P2D7 4330 aa5.02□□□□□ -1.61
TRO-201ENST00000173898 DNAH10Q8IVF4 4471 aa5.01□□□□□ -1.61
TRO-201ENST00000173898 KRTAP4-1Q9BYQ7 146 aa5□□□□□ -1.61
TRO-201ENST00000173898 ANK2Q01484 3957 aa4.95□□□□□ -1.62
TRO-201ENST00000173898 ALMS1Q8TCU4 4167 aa4.95□□□□□ -1.62
TRO-201ENST00000173898 DNAH8Q96JB1 4490 aa4.93□□□□□ -1.62
TRO-201ENST00000173898 RYR1P21817 5038 aa4.93□□□□□ -1.62
TRO-201ENST00000173898 DYNC1H1Q14204 4646 aaKnown RBP4.91□□□□□ -1.62
TRO-201ENST00000173898 CMYA5Q8N3K9 4069 aa4.89□□□□□ -1.63
TRO-201ENST00000173898 VPS13DQ5THJ4 4388 aa4.86□□□□□ -1.63
TRO-201ENST00000173898 LRP1BQ9NZR2 4599 aa4.86□□□□□ -1.63
TRO-201ENST00000173898 DNAH17Q9UFH2 4485 aa4.85□□□□□ -1.63
TRO-201ENST00000173898 MT1HP80294 61 aa4.83□□□□□ -1.64
TRO-201ENST00000173898 STARD9Q9P2P6 4700 aa4.81□□□□□ -1.64
TRO-201ENST00000173898 DNAH2Q9P225 4427 aa4.81□□□□□ -1.64
TRO-201ENST00000173898 MT2AP02795 61 aa4.81□□□□□ -1.64
TRO-201ENST00000173898 SACSQ9NZJ4 4579 aa4.8□□□□□ -1.64
TRO-201ENST00000173898 KRTAP8-1Q8IUC2 63 aa4.8□□□□□ -1.64
TRO-201ENST00000173898 DNAH3Q8TD57 4116 aa4.79□□□□□ -1.64
TRO-201ENST00000173898 SPRR2GQ9BYE4 73 aa4.79□□□□□ -1.64
TRO-201ENST00000173898 MYCBP2O75592 4640 aa4.75□□□□□ -1.65
TRO-201ENST00000173898 KRTAP10-5P60370 271 aa4.74□□□□□ -1.65
TRO-201ENST00000173898 KIAA1109Q2LD37 5005 aa4.74□□□□□ -1.65
TRO-201ENST00000173898 MT1FP04733 61 aa4.72□□□□□ -1.65
TRO-201ENST00000173898 LYSTQ99698 3801 aa4.7□□□□□ -1.66
TRO-201ENST00000173898 PRKDCP78527 4128 aaKnown RBP4.7□□□□□ -1.66
TRO-201ENST00000173898 APOBP04114 4563 aaKnown RBP4.69□□□□□ -1.66
TRO-201ENST00000173898 FAT2Q9NYQ8 4349 aa4.66□□□□□ -1.66
TRO-201ENST00000173898 DYNC2H1Q8NCM8 4307 aaKnown RBP4.64□□□□□ -1.67
TRO-201ENST00000173898 VPS13BQ7Z7G8 4022 aa4.63□□□□□ -1.67
TRO-201ENST00000173898 DNAH7Q8WXX0 4024 aa4.62□□□□□ -1.67
TRO-201ENST00000173898 KMT2AQ03164 3969 aa4.6□□□□□ -1.67
TRO-201ENST00000173898 RYR3Q15413 4870 aa4.6□□□□□ -1.67
TRO-201ENST00000173898 KRTAP19-5Q3LI72 72 aa4.58□□□□□ -1.68
TRO-201ENST00000173898 KRTAP17-1Q9BYP8 105 aa4.57□□□□□ -1.68
TRO-201ENST00000173898 FAT3Q8TDW7 4589 aa4.57□□□□□ -1.68
TRO-201ENST00000173898 LRP1Q07954 4544 aaKnown RBP4.54□□□□□ -1.68
TRO-201ENST00000173898 KRTAP19-1Q8IUB9 90 aa4.53□□□□□ -1.68
TRO-201ENST00000173898 LCE3CQ5T5A8 94 aa4.5□□□□□ -1.69
TRO-201ENST00000173898 SPRR2FQ96RM1 72 aa4.48□□□□□ -1.69
TRO-201ENST00000173898 KRTAP19-8Q3LI54 63 aa4.45□□□□□ -1.7
TRO-201ENST00000173898 KRTAP10-7P60409 375 aaPredicted RBP4.44□□□□□ -1.7
TRO-201ENST00000173898 RYR2Q92736 4967 aa4.41□□□□□ -1.7
TRO-201ENST00000173898 HYDINQ4G0P3 5121 aa4.41□□□□□ -1.7
TRO-201ENST00000173898 LRP2P98164 4655 aa4.41□□□□□ -1.7
TRO-201ENST00000173898 HERC2O95714 4834 aa4.39□□□□□ -1.71
TRO-201ENST00000173898 HECTD4Q9Y4D8 3996 aa4.39□□□□□ -1.71
TRO-201ENST00000173898 MT1XP80297 61 aa4.36□□□□□ -1.71
TRO-201ENST00000173898 DNAH6Q9C0G6 4158 aa4.36□□□□□ -1.71
TRO-201ENST00000173898 KRTAP19-4Q3LI73 84 aa4.36□□□□□ -1.71
TRO-201ENST00000173898 FRAS1Q86XX4 4008 aa4.35□□□□□ -1.71
TRO-201ENST00000173898 MT1BP07438 61 aa4.33□□□□□ -1.72
TRO-201ENST00000173898 KRTAP9-8Q9BYQ0 159 aa4.31□□□□□ -1.72
TRO-201ENST00000173898 KMT2CQ8NEZ4 4911 aaKnown RBP4.29□□□□□ -1.72
TRO-201ENST00000173898 PKHD1P08F94 4074 aa4.28□□□□□ -1.72
TRO-201ENST00000173898 PCLOQ9Y6V0 5065 aa4.27□□□□□ -1.73
TRO-201ENST00000173898 LCE2CQ5TA81 110 aa4.26□□□□□ -1.73
TRO-201ENST00000173898 PKD1P98161 4303 aa4.25□□□□□ -1.73
TRO-201ENST00000173898 KRTAP4-8A0A0G2JLE6 195 aa4.23□□□□□ -1.73
TRO-201ENST00000173898 KRTAP4-8Q9BYQ9 185 aa4.23□□□□□ -1.73
TRO-201ENST00000173898 KRTAP9-3Q9BYQ3 159 aa4.2□□□□□ -1.74
TRO-201ENST00000173898 SPRR5A0A1B0GTR4 108 aa4.19□□□□□ -1.74
TRO-201ENST00000173898 SYNE1Q8NF91 8797 aaKnown RBP4.18□□□□□ -1.74
TRO-201ENST00000173898 MT1GP13640 62 aa4.16□□□□□ -1.74
TRO-201ENST00000173898 LCE3BQ5TA77 95 aa4.15□□□□□ -1.74
TRO-201ENST00000173898 HERC1Q15751 4861 aa4.15□□□□□ -1.75
TRO-201ENST00000173898 BIRC6Q9NR09 4857 aa4.15□□□□□ -1.75
TRO-201ENST00000173898 HSPG2P98160 4391 aa4.13□□□□□ -1.75
TRO-201ENST00000173898 EPPK1P58107 5090 aaKnown RBP4.12□□□□□ -1.75
TRO-201ENST00000173898 SPRR2EP22531 72 aa4.12□□□□□ -1.75
TRO-201ENST00000173898 SPRR2BP35325 72 aa4.12□□□□□ -1.75
TRO-201ENST00000173898 SPRR2AP35326 72 aa4.12□□□□□ -1.75
TRO-201ENST00000173898 KRTAP12-4P60329 112 aa4.11□□□□□ -1.75
TRO-201ENST00000173898 KRTAP19-2Q3LHN2 52 aa4.09□□□□□ -1.75
TRO-201ENST00000173898 LPAP08519 4548 aa4.08□□□□□ -1.76
TRO-201ENST00000173898 ABCA13Q86UQ4 5058 aa4.03□□□□□ -1.76
TRO-201ENST00000173898 LCE2BO14633 110 aa4.02□□□□□ -1.77
TRO-201ENST00000173898 MUC17Q685J3 4493 aa4□□□□□ -1.77
TRO-201ENST00000173898 KRTAP4-7Q9BYR0 210 aa4□□□□□ -1.77
TRO-201ENST00000173898 SPRR2DP22532 72 aa3.97□□□□□ -1.77
TRO-201ENST00000173898 UBR4Q5T4S7 5183 aa3.95□□□□□ -1.78
TRO-201ENST00000173898 MT1LQ93083 61 aa3.95□□□□□ -1.78
TRO-201ENST00000173898 KRTAP19-3Q7Z4W3 81 aa3.94□□□□□ -1.78
TRO-201ENST00000173898 LCE3DQ9BYE3 92 aa3.93□□□□□ -1.78
TRO-201ENST00000173898 FSIP2Q5CZC0 6907 aa3.93□□□□□ -1.78
TRO-201ENST00000173898 PKHD1L1Q86WI1 4243 aa3.92□□□□□ -1.78
TRO-201ENST00000173898 MT1EP04732 61 aa3.91□□□□□ -1.78
TRO-201ENST00000173898 FLGP20930 4061 aaPredicted RBP3.88□□□□□ -1.79
TRO-201ENST00000173898 LCE3EQ5T5B0 92 aa3.87□□□□□ -1.79
TRO-201ENST00000173898 TNXBP22105 4242 aa3.87□□□□□ -1.79
TRO-201ENST00000173898 FAT4Q6V0I7 4981 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms