RNA–Protein interactions for RNA: ENST00000040877.1

TARBP1-201, Transcript of TAR (HIV-1) RNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TARBP1, Length 5,130 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARBP1-201ENST00000040877 DNAH5Q8TE73 4624 aa9.75□□□□□ -0.85
TARBP1-201ENST00000040877 CRCT1Q9UGL9 99 aa9.73□□□□□ -0.85
TARBP1-201ENST00000040877 VPS13CQ709C8 3753 aa9.63□□□□□ -0.87
TARBP1-201ENST00000040877 DNAH10Q8IVF4 4471 aa9.58□□□□□ -0.88
TARBP1-201ENST00000040877 PLECQ15149 4684 aaKnown RBP9.57□□□□□ -0.88
TARBP1-201ENST00000040877 DNAH11Q96DT5 4516 aa9.57□□□□□ -0.88
TARBP1-201ENST00000040877 DNAH1Q9P2D7 4330 aa9.55□□□□□ -0.88
TARBP1-201ENST00000040877 KRTAP8-1Q8IUC2 63 aa9.53□□□□□ -0.88
TARBP1-201ENST00000040877 KRTAP4-1Q9BYQ7 146 aa9.51□□□□□ -0.89
TARBP1-201ENST00000040877 ZNF469Q96JG9 3925 aaPredicted RBP9.49□□□□□ -0.89
TARBP1-201ENST00000040877 MT1HP80294 61 aa9.48□□□□□ -0.89
TARBP1-201ENST00000040877 DNAH2Q9P225 4427 aa9.4□□□□□ -0.9
TARBP1-201ENST00000040877 SPRR2GQ9BYE4 73 aa9.36□□□□□ -0.91
TARBP1-201ENST00000040877 MT2AP02795 61 aa9.36□□□□□ -0.91
TARBP1-201ENST00000040877 CSMD3Q7Z407 3707 aa9.34□□□□□ -0.91
TARBP1-201ENST00000040877 DNHD1Q96M86 4753 aa9.33□□□□□ -0.92
TARBP1-201ENST00000040877 VPS13DQ5THJ4 4388 aa9.32□□□□□ -0.92
TARBP1-201ENST00000040877 DNAH17Q9UFH2 4485 aa9.31□□□□□ -0.92
TARBP1-201ENST00000040877 DYNC1H1Q14204 4646 aaKnown RBP9.25□□□□□ -0.93
TARBP1-201ENST00000040877 AKAP9Q99996 3911 aa9.24□□□□□ -0.93
TARBP1-201ENST00000040877 FAT1Q14517 4588 aa9.11□□□□□ -0.95
TARBP1-201ENST00000040877 MT1FP04733 61 aa9.11□□□□□ -0.95
TARBP1-201ENST00000040877 LRP1BQ9NZR2 4599 aa9.11□□□□□ -0.95
TARBP1-201ENST00000040877 KRTAP10-5P60370 271 aa9.08□□□□□ -0.96
TARBP1-201ENST00000040877 RYR1P21817 5038 aa9.05□□□□□ -0.96
TARBP1-201ENST00000040877 SACSQ9NZJ4 4579 aa9□□□□□ -0.97
TARBP1-201ENST00000040877 DYNC2H1Q8NCM8 4307 aaKnown RBP9□□□□□ -0.97
TARBP1-201ENST00000040877 FAT2Q9NYQ8 4349 aa8.99□□□□□ -0.97
TARBP1-201ENST00000040877 KRTAP19-4Q3LI73 84 aa8.95□□□□□ -0.98
TARBP1-201ENST00000040877 STARD9Q9P2P6 4700 aa8.93□□□□□ -0.98
TARBP1-201ENST00000040877 DNAH3Q8TD57 4116 aa8.85□□□□□ -0.99
TARBP1-201ENST00000040877 DNAH8Q96JB1 4490 aa8.82□□□□□ -1
TARBP1-201ENST00000040877 SPRR2FQ96RM1 72 aa8.82□□□□□ -1
TARBP1-201ENST00000040877 KRTAP19-5Q3LI72 72 aa8.82□□□□□ -1
TARBP1-201ENST00000040877 KRTAP10-7P60409 375 aaPredicted RBP8.79□□□□□ -1
TARBP1-201ENST00000040877 KRTAP19-8Q3LI54 63 aa8.74□□□□□ -1.01
TARBP1-201ENST00000040877 APOBP04114 4563 aaKnown RBP8.73□□□□□ -1.01
TARBP1-201ENST00000040877 LCE3CQ5T5A8 94 aa8.71□□□□□ -1.01
TARBP1-201ENST00000040877 RYR3Q15413 4870 aa8.67□□□□□ -1.02
TARBP1-201ENST00000040877 KRTAP19-1Q8IUB9 90 aa8.62□□□□□ -1.03
TARBP1-201ENST00000040877 PRKDCP78527 4128 aaKnown RBP8.62□□□□□ -1.03
TARBP1-201ENST00000040877 ANK2Q01484 3957 aa8.59□□□□□ -1.03
TARBP1-201ENST00000040877 KIAA1109Q2LD37 5005 aa8.55□□□□□ -1.04
TARBP1-201ENST00000040877 KRTAP17-1Q9BYP8 105 aa8.54□□□□□ -1.04
TARBP1-201ENST00000040877 RYR2Q92736 4967 aa8.53□□□□□ -1.04
TARBP1-201ENST00000040877 DNAH6Q9C0G6 4158 aa8.49□□□□□ -1.05
TARBP1-201ENST00000040877 FAT3Q8TDW7 4589 aa8.47□□□□□ -1.05
TARBP1-201ENST00000040877 VPS13BQ7Z7G8 4022 aa8.45□□□□□ -1.06
TARBP1-201ENST00000040877 LRP1Q07954 4544 aaKnown RBP8.45□□□□□ -1.06
TARBP1-201ENST00000040877 MT1XP80297 61 aa8.38□□□□□ -1.07
TARBP1-201ENST00000040877 KMT2AQ03164 3969 aa8.37□□□□□ -1.07
TARBP1-201ENST00000040877 HERC1Q15751 4861 aa8.36□□□□□ -1.07
TARBP1-201ENST00000040877 KRTAP9-8Q9BYQ0 159 aa8.34□□□□□ -1.07
TARBP1-201ENST00000040877 MT1BP07438 61 aa8.33□□□□□ -1.08
TARBP1-201ENST00000040877 SPRR2EP22531 72 aa8.28□□□□□ -1.08
TARBP1-201ENST00000040877 SPRR2BP35325 72 aa8.28□□□□□ -1.08
TARBP1-201ENST00000040877 SPRR2AP35326 72 aa8.28□□□□□ -1.08
TARBP1-201ENST00000040877 DNAH7Q8WXX0 4024 aa8.28□□□□□ -1.08
TARBP1-201ENST00000040877 MYCBP2O75592 4640 aa8.26□□□□□ -1.09
TARBP1-201ENST00000040877 LYSTQ99698 3801 aa8.25□□□□□ -1.09
TARBP1-201ENST00000040877 HSPG2P98160 4391 aa8.21□□□□□ -1.09
TARBP1-201ENST00000040877 LCE2CQ5TA81 110 aa8.2□□□□□ -1.1
TARBP1-201ENST00000040877 KRTAP9-3Q9BYQ3 159 aa8.17□□□□□ -1.1
TARBP1-201ENST00000040877 BIRC6Q9NR09 4857 aa8.15□□□□□ -1.1
TARBP1-201ENST00000040877 HERC2O95714 4834 aa8.13□□□□□ -1.11
TARBP1-201ENST00000040877 SPRR5A0A1B0GTR4 108 aa8.1□□□□□ -1.11
TARBP1-201ENST00000040877 MT1GP13640 62 aa8.09□□□□□ -1.11
TARBP1-201ENST00000040877 CMYA5Q8N3K9 4069 aa8.07□□□□□ -1.12
TARBP1-201ENST00000040877 LCE2BO14633 110 aa8.04□□□□□ -1.12
TARBP1-201ENST00000040877 PKD1P98161 4303 aa8.04□□□□□ -1.12
TARBP1-201ENST00000040877 SPRR2DP22532 72 aa8.04□□□□□ -1.12
TARBP1-201ENST00000040877 PCLOQ9Y6V0 5065 aa7.96□□□□□ -1.14
TARBP1-201ENST00000040877 KRTAP12-4P60329 112 aa7.93□□□□□ -1.14
TARBP1-201ENST00000040877 HECTD4Q9Y4D8 3996 aa7.93□□□□□ -1.14
TARBP1-201ENST00000040877 LCE3BQ5TA77 95 aa7.93□□□□□ -1.14
TARBP1-201ENST00000040877 KRTAP4-8A0A0G2JLE6 195 aa7.93□□□□□ -1.14
TARBP1-201ENST00000040877 KRTAP4-8Q9BYQ9 185 aa7.93□□□□□ -1.14
TARBP1-201ENST00000040877 FRAS1Q86XX4 4008 aa7.85□□□□□ -1.15
TARBP1-201ENST00000040877 PKHD1L1Q86WI1 4243 aa7.84□□□□□ -1.15
TARBP1-201ENST00000040877 HYDINQ4G0P3 5121 aa7.84□□□□□ -1.15
TARBP1-201ENST00000040877 KRTAP19-2Q3LHN2 52 aa7.81□□□□□ -1.16
TARBP1-201ENST00000040877 LRP2P98164 4655 aa7.81□□□□□ -1.16
TARBP1-201ENST00000040877 KRTAP19-3Q7Z4W3 81 aa7.74□□□□□ -1.17
TARBP1-201ENST00000040877 MT1LQ93083 61 aa7.63□□□□□ -1.19
TARBP1-201ENST00000040877 LCE3DQ9BYE3 92 aa7.6□□□□□ -1.19
TARBP1-201ENST00000040877 MT1EP04732 61 aa7.59□□□□□ -1.19
TARBP1-201ENST00000040877 PKHD1P08F94 4074 aa7.54□□□□□ -1.2
TARBP1-201ENST00000040877 EPPK1P58107 5090 aaKnown RBP7.52□□□□□ -1.21
TARBP1-201ENST00000040877 KRTAP19-6Q3LI70 58 aa7.52□□□□□ -1.21
TARBP1-201ENST00000040877 KMT2CQ8NEZ4 4911 aaKnown RBP7.51□□□□□ -1.21
TARBP1-201ENST00000040877 LCE3EQ5T5B0 92 aa7.5□□□□□ -1.21
TARBP1-201ENST00000040877 MUC17Q685J3 4493 aa7.49□□□□□ -1.21
TARBP1-201ENST00000040877 FLGP20930 4061 aaPredicted RBP7.4□□□□□ -1.23
TARBP1-201ENST00000040877 LPAP08519 4548 aa7.38□□□□□ -1.23
TARBP1-201ENST00000040877 ABCA13Q86UQ4 5058 aa7.37□□□□□ -1.23
TARBP1-201ENST00000040877 KRTAP4-7Q9BYR0 210 aa7.36□□□□□ -1.23
TARBP1-201ENST00000040877 MT1MQ8N339 61 aa7.35□□□□□ -1.23
TARBP1-201ENST00000040877 LCE2DQ5TA82 110 aaPredicted RBP7.33□□□□□ -1.24
TARBP1-201ENST00000040877 TNXBP22105 4242 aa7.29□□□□□ -1.24
TARBP1-201ENST00000040877 KRTAP9-2Q9BYQ4 174 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms