RNA–Protein interactions for RNA: ENST00000638488.1

GFAP-228, Transcript of glial fibrillary acidic protein, humanhuman

TSL 5

Gene GFAP, Length 2,641 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-228ENST00000638488 NBDYA0A0U1RRE5 68 aa7.32□□□□□ -1.24
GFAP-228ENST00000638488 Q96NJ1 140 aa7.31□□□□□ -1.24
GFAP-228ENST00000638488 PLECQ15149 4684 aaKnown RBP7.3□□□□□ -1.24
GFAP-228ENST00000638488 ALMS1Q8TCU4 4167 aa7.3□□□□□ -1.24
GFAP-228ENST00000638488 A0A1B0GU69 56 aa7.3□□□□□ -1.24
GFAP-228ENST00000638488 MRPL34Q9BQ48 92 aaKnown RBP7.3□□□□□ -1.24
GFAP-228ENST00000638488 C14orf177Q52M58 125 aa7.3□□□□□ -1.24
GFAP-228ENST00000638488 MIR22HGQ0VDD5 57 aa7.29□□□□□ -1.24
GFAP-228ENST00000638488 CSAG1Q6PB30 78 aa7.29□□□□□ -1.24
GFAP-228ENST00000638488 A0A1B0GVX0 72 aa7.28□□□□□ -1.24
GFAP-228ENST00000638488 UQCR11O14957 56 aa7.27□□□□□ -1.25
GFAP-228ENST00000638488 PRKDCP78527 4128 aaKnown RBP7.27□□□□□ -1.25
GFAP-228ENST00000638488 KRTAP11-1Q8IUC1 163 aa7.26□□□□□ -1.25
GFAP-228ENST00000638488 MEGF8Q7Z7M0 2845 aa7.25□□□□□ -1.25
GFAP-228ENST00000638488 STARD9Q9P2P6 4700 aa7.25□□□□□ -1.25
GFAP-228ENST00000638488 DMAC1Q96GE9 116 aa7.25□□□□□ -1.25
GFAP-228ENST00000638488 PANO1I0J062 215 aa7.24□□□□□ -1.25
GFAP-228ENST00000638488 DYNC2H1Q8NCM8 4307 aaKnown RBP7.24□□□□□ -1.25
GFAP-228ENST00000638488 Q6ZRN7 208 aaPredicted RBP7.24□□□□□ -1.25
GFAP-228ENST00000638488 IGHV6-1A0A0B4J1U7 121 aa7.23□□□□□ -1.25
GFAP-228ENST00000638488 KRTAP13-3Q3SY46 172 aa7.22□□□□□ -1.25
GFAP-228ENST00000638488 CDK2AP2O75956 126 aa7.21□□□□□ -1.25
GFAP-228ENST00000638488 SRRM2Q9UQ35 2752 aaKnown RBP7.2□□□□□ -1.26
GFAP-228ENST00000638488 DNHD1Q96M86 4753 aa7.2□□□□□ -1.26
GFAP-228ENST00000638488 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.18□□□□□ -1.26
GFAP-228ENST00000638488 A0A087WTM6 91 aa7.17□□□□□ -1.26
GFAP-228ENST00000638488 ZNF861PO60384 105 aa7.17□□□□□ -1.26
GFAP-228ENST00000638488 LY6G6CO95867 125 aa7.16□□□□□ -1.26
GFAP-228ENST00000638488 Q5W150 140 aa7.16□□□□□ -1.26
GFAP-228ENST00000638488 KMT2AQ03164 3969 aa7.16□□□□□ -1.26
GFAP-228ENST00000638488 C1orf134Q5TEV5 83 aa7.15□□□□□ -1.26
GFAP-228ENST00000638488 TGP01266 2768 aa7.13□□□□□ -1.27
GFAP-228ENST00000638488 SPACA4Q8TDM5 124 aa7.13□□□□□ -1.27
GFAP-228ENST00000638488 NOTCH2NLQ7Z3S9 236 aa7.13□□□□□ -1.27
GFAP-228ENST00000638488 KRTAP13-1Q8IUC0 172 aa7.12□□□□□ -1.27
GFAP-228ENST00000638488 VPS13DQ5THJ4 4388 aa7.12□□□□□ -1.27
GFAP-228ENST00000638488 IGLV9-49A0A0B4J1Y8 123 aa7.1□□□□□ -1.27
GFAP-228ENST00000638488 ZNF706Q9Y5V0 76 aaPredicted RBP7.1□□□□□ -1.27
GFAP-228ENST00000638488 ROMO1P60602 79 aa7.1□□□□□ -1.27
GFAP-228ENST00000638488 LINC00483Q53H64 154 aa7.09□□□□□ -1.27
GFAP-228ENST00000638488 A0A0A0MQY5 61 aa7.09□□□□□ -1.27
GFAP-228ENST00000638488 IGLV5-52A0A0A0MRZ9 124 aa7.09□□□□□ -1.27
GFAP-228ENST00000638488 DNAH2Q9P225 4427 aa7.08□□□□□ -1.28
GFAP-228ENST00000638488 FBN3Q75N90 2809 aa7.08□□□□□ -1.28
GFAP-228ENST00000638488 IGLV7-43P04211 117 aa7.07□□□□□ -1.28
GFAP-228ENST00000638488 KRTAP25-1Q3LHN0 102 aa7.07□□□□□ -1.28
GFAP-228ENST00000638488 PSORS1C2Q9UIG4 136 aa7.05□□□□□ -1.28
GFAP-228ENST00000638488 LCE2DQ5TA82 110 aaPredicted RBP7.05□□□□□ -1.28
GFAP-228ENST00000638488 HECTD4Q9Y4D8 3996 aa7.04□□□□□ -1.28
GFAP-228ENST00000638488 ANAPC11Q9NYG5 84 aa7.03□□□□□ -1.28
GFAP-228ENST00000638488 FAM229AH3BQW9 127 aa7.03□□□□□ -1.28
GFAP-228ENST00000638488 IGKV2-30P06310 120 aa7.02□□□□□ -1.29
GFAP-228ENST00000638488 WWC2-AS2Q96NR7 200 aa7□□□□□ -1.29
GFAP-228ENST00000638488 FRAS1Q86XX4 4008 aa7□□□□□ -1.29
GFAP-228ENST00000638488 A8MUU9 505 aa6.99□□□□□ -1.29
GFAP-228ENST00000638488 KRTAP10-2P60368 255 aa6.98□□□□□ -1.29
GFAP-228ENST00000638488 DNAH17Q9UFH2 4485 aa6.96□□□□□ -1.3
GFAP-228ENST00000638488 DNAH8Q96JB1 4490 aa6.95□□□□□ -1.3
GFAP-228ENST00000638488 DNAH6Q9C0G6 4158 aa6.94□□□□□ -1.3
GFAP-228ENST00000638488 SPINK6Q6UWN8 80 aa6.94□□□□□ -1.3
GFAP-228ENST00000638488 CIRBP-AS1Q8TBR5 109 aa6.93□□□□□ -1.3
GFAP-228ENST00000638488 LINC00304Q8N9R0 145 aa6.92□□□□□ -1.3
GFAP-228ENST00000638488 IGKV2D-30A0A075B6S6 120 aa6.9□□□□□ -1.3
GFAP-228ENST00000638488 HYDINQ4G0P3 5121 aa6.89□□□□□ -1.31
GFAP-228ENST00000638488 KRTAP10-1P60331 282 aa6.88□□□□□ -1.31
GFAP-228ENST00000638488 H0YAA0 97 aa6.87□□□□□ -1.31
GFAP-228ENST00000638488 P0C880 135 aa6.87□□□□□ -1.31
GFAP-228ENST00000638488 DNAH5Q8TE73 4624 aa6.86□□□□□ -1.31
GFAP-228ENST00000638488 KRTAP3-3Q9BYR6 98 aa6.86□□□□□ -1.31
GFAP-228ENST00000638488 KRTAP3-2Q9BYR7 98 aa6.86□□□□□ -1.31
GFAP-228ENST00000638488 DNAH11Q96DT5 4516 aa6.86□□□□□ -1.31
GFAP-228ENST00000638488 Q6ZSA8 131 aa6.84□□□□□ -1.31
GFAP-228ENST00000638488 KRTAP21-3Q3LHN1 58 aa6.81□□□□□ -1.32
GFAP-228ENST00000638488 PKD1P98161 4303 aa6.8□□□□□ -1.32
GFAP-228ENST00000638488 KRTAP16-1A8MUX0 517 aa6.79□□□□□ -1.32
GFAP-228ENST00000638488 FAT2Q9NYQ8 4349 aa6.79□□□□□ -1.32
GFAP-228ENST00000638488 SSBP3-AS1Q7Z2R9 100 aa6.77□□□□□ -1.33
GFAP-228ENST00000638488 LRP1BQ9NZR2 4599 aa6.77□□□□□ -1.33
GFAP-228ENST00000638488 SPINK1P00995 79 aa6.77□□□□□ -1.33
GFAP-228ENST00000638488 A0A1B0GU33 70 aa6.76□□□□□ -1.33
GFAP-228ENST00000638488 K7ERS5 55 aa6.74□□□□□ -1.33
GFAP-228ENST00000638488 KRTAP13-2Q52LG2 175 aa6.74□□□□□ -1.33
GFAP-228ENST00000638488 H1FX-AS1Q4G0G2 97 aa6.72□□□□□ -1.33
GFAP-228ENST00000638488 SMR3BP02814 79 aaPredicted RBP6.7□□□□□ -1.34
GFAP-228ENST00000638488 PKHD1P08F94 4074 aa6.69□□□□□ -1.34
GFAP-228ENST00000638488 TYMSOSQ8TAI1 123 aa6.68□□□□□ -1.34
GFAP-228ENST00000638488 VPS13BQ7Z7G8 4022 aa6.68□□□□□ -1.34
GFAP-228ENST00000638488 KRTAP1-4P0C5Y4 121 aa6.67□□□□□ -1.34
GFAP-228ENST00000638488 Q8N1X5 172 aa6.67□□□□□ -1.34
GFAP-228ENST00000638488 SACSQ9NZJ4 4579 aa6.66□□□□□ -1.34
GFAP-228ENST00000638488 CRIPTQ9P021 101 aa6.66□□□□□ -1.34
GFAP-228ENST00000638488 J3QL48 77 aa6.65□□□□□ -1.34
GFAP-228ENST00000638488 SPINT4Q6UDR6 99 aa6.63□□□□□ -1.35
GFAP-228ENST00000638488 C20orf166-AS1Q96NR2 134 aa6.62□□□□□ -1.35
GFAP-228ENST00000638488 FLG2Q5D862 2391 aaPredicted RBP6.6□□□□□ -1.35
GFAP-228ENST00000638488 KRTAP15-1Q3LI76 137 aa6.58□□□□□ -1.36
GFAP-228ENST00000638488 NDUFAF8A1L188 74 aa6.58□□□□□ -1.36
GFAP-228ENST00000638488 A0A1B0GVY2 172 aa6.55□□□□□ -1.36
GFAP-228ENST00000638488 DYNC1H1Q14204 4646 aaKnown RBP6.55□□□□□ -1.36
GFAP-228ENST00000638488 COX6B2Q6YFQ2 88 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms