RNA–Protein interactions for RNA: ENST00000621748.1

SCAMP4-213, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SCAMP4, Length 1,172 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-213ENST00000621748 IGKV4-1P06312 121 aa9.67□□□□□ -0.86
SCAMP4-213ENST00000621748 LCE2CQ5TA81 110 aa9.64□□□□□ -0.87
SCAMP4-213ENST00000621748 UBL5Q9BZL1 73 aa9.64□□□□□ -0.87
SCAMP4-213ENST00000621748 KRTAP19-2Q3LHN2 52 aa9.63□□□□□ -0.87
SCAMP4-213ENST00000621748 DEFB116Q30KQ4 102 aa9.62□□□□□ -0.87
SCAMP4-213ENST00000621748 NDUFB1O75438 58 aa9.61□□□□□ -0.87
SCAMP4-213ENST00000621748 ACYP1P07311 99 aa9.61□□□□□ -0.87
SCAMP4-213ENST00000621748 RPL37P61927 97 aaKnown RBP9.61□□□□□ -0.87
SCAMP4-213ENST00000621748 LINC00472Q9H8W2 130 aa9.61□□□□□ -0.87
SCAMP4-213ENST00000621748 J3QR89 54 aa9.6□□□□□ -0.87
SCAMP4-213ENST00000621748 Q96NJ1 140 aa9.58□□□□□ -0.88
SCAMP4-213ENST00000621748 BPY2O14599 106 aa9.57□□□□□ -0.88
SCAMP4-213ENST00000621748 Q6ZVQ6 151 aa9.55□□□□□ -0.88
SCAMP4-213ENST00000621748 LINC00846Q9NV44 126 aa9.55□□□□□ -0.88
SCAMP4-213ENST00000621748 IGHV6-1A0A0B4J1U7 121 aa9.53□□□□□ -0.88
SCAMP4-213ENST00000621748 FAM240AA0A1B0GVK7 77 aa9.52□□□□□ -0.89
SCAMP4-213ENST00000621748 A8MWP4 228 aa9.51□□□□□ -0.89
SCAMP4-213ENST00000621748 LINC00313P59037 77 aa9.51□□□□□ -0.89
SCAMP4-213ENST00000621748 A0A1B0GVX0 72 aa9.5□□□□□ -0.89
SCAMP4-213ENST00000621748 MT1HP80294 61 aa9.5□□□□□ -0.89
SCAMP4-213ENST00000621748 C8orf87E5RJ46 101 aa9.49□□□□□ -0.89
SCAMP4-213ENST00000621748 DSCR10P59022 87 aa9.46□□□□□ -0.9
SCAMP4-213ENST00000621748 Q75L30 129 aa9.44□□□□□ -0.9
SCAMP4-213ENST00000621748 PRR15Q8IV56 129 aa9.43□□□□□ -0.9
SCAMP4-213ENST00000621748 IGKV3D-7A0A0C4DH55 119 aa9.42□□□□□ -0.9
SCAMP4-213ENST00000621748 K7ERU9 68 aa9.42□□□□□ -0.9
SCAMP4-213ENST00000621748 FLGP20930 4061 aaPredicted RBP9.41□□□□□ -0.9
SCAMP4-213ENST00000621748 CXCL6P80162 114 aa9.41□□□□□ -0.9
SCAMP4-213ENST00000621748 ATP11AUNQ6ZP68 121 aa9.4□□□□□ -0.9
SCAMP4-213ENST00000621748 LCE2DQ5TA82 110 aaPredicted RBP9.39□□□□□ -0.91
SCAMP4-213ENST00000621748 ATP5EP2Q5VTU8 51 aa9.39□□□□□ -0.91
SCAMP4-213ENST00000621748 C8orf17Q9NRJ1 99 aa9.39□□□□□ -0.91
SCAMP4-213ENST00000621748 K7EQZ3 153 aa9.38□□□□□ -0.91
SCAMP4-213ENST00000621748 LINC00643Q86TS7 51 aa9.37□□□□□ -0.91
SCAMP4-213ENST00000621748 KRTAP9-6A0A140TA67 174 aa9.36□□□□□ -0.91
SCAMP4-213ENST00000621748 COX6B2Q6YFQ2 88 aa9.36□□□□□ -0.91
SCAMP4-213ENST00000621748 C20orf166-AS1Q96NR2 134 aa9.35□□□□□ -0.91
SCAMP4-213ENST00000621748 A8MUU9 505 aa9.34□□□□□ -0.91
SCAMP4-213ENST00000621748 Q8N9L7 120 aa9.34□□□□□ -0.91
SCAMP4-213ENST00000621748 LORP23490 312 aaPredicted RBP9.32□□□□□ -0.92
SCAMP4-213ENST00000621748 NOTCH2NLQ7Z3S9 236 aa9.32□□□□□ -0.92
SCAMP4-213ENST00000621748 hDV103S1A0JD37 113 aa9.31□□□□□ -0.92
SCAMP4-213ENST00000621748 KRTAP10-6P60371 365 aaPredicted RBP9.31□□□□□ -0.92
SCAMP4-213ENST00000621748 HIST1H4AP62805 103 aaKnown RBP9.31□□□□□ -0.92
SCAMP4-213ENST00000621748 CASC2Q6XLA1 102 aa9.3□□□□□ -0.92
SCAMP4-213ENST00000621748 TMEM254Q8TBM7 123 aa9.3□□□□□ -0.92
SCAMP4-213ENST00000621748 M0R2T5 61 aa9.29□□□□□ -0.92
SCAMP4-213ENST00000621748 NDUFS5O43920 106 aa9.29□□□□□ -0.92
SCAMP4-213ENST00000621748 MMP24-AS1A0A0U1RRL7 71 aa9.28□□□□□ -0.92
SCAMP4-213ENST00000621748 WFDC13Q8IUB5 93 aa9.28□□□□□ -0.92
SCAMP4-213ENST00000621748 MRPL34Q9BQ48 92 aaKnown RBP9.28□□□□□ -0.92
SCAMP4-213ENST00000621748 HCG22E2RYF7 251 aa9.27□□□□□ -0.93
SCAMP4-213ENST00000621748 FSIP2Q5CZC0 6907 aa9.26□□□□□ -0.93
SCAMP4-213ENST00000621748 KRTAP16-1A8MUX0 517 aa9.26□□□□□ -0.93
SCAMP4-213ENST00000621748 Q8N9P0 234 aaPredicted RBP9.21□□□□□ -0.94
SCAMP4-213ENST00000621748 CRCT1Q9UGL9 99 aa9.16□□□□□ -0.94
SCAMP4-213ENST00000621748 ZCCHC13Q8WW36 166 aaKnown RBP9.15□□□□□ -0.94
SCAMP4-213ENST00000621748 TP53AIP1Q9HCN2 124 aa9.12□□□□□ -0.95
SCAMP4-213ENST00000621748 IMUPQ9GZP8 106 aa9.1□□□□□ -0.95
SCAMP4-213ENST00000621748 A0A087WVE0 104 aa9.09□□□□□ -0.95
SCAMP4-213ENST00000621748 SCGB1A1P11684 91 aa9.07□□□□□ -0.96
SCAMP4-213ENST00000621748 MT-ATP8P03928 68 aa9.05□□□□□ -0.96
SCAMP4-213ENST00000621748 HRES1P13985 223 aa9.04□□□□□ -0.96
SCAMP4-213ENST00000621748 MPLKIPQ8TAP9 179 aa9.03□□□□□ -0.96
SCAMP4-213ENST00000621748 KRTAP9-8Q9BYQ0 159 aa9□□□□□ -0.97
SCAMP4-213ENST00000621748 FAM236DA0A1B0GTK5 79 aa8.99□□□□□ -0.97
SCAMP4-213ENST00000621748 UQCRQO14949 82 aa8.99□□□□□ -0.97
SCAMP4-213ENST00000621748 FAM236CP0DP71 79 aa8.99□□□□□ -0.97
SCAMP4-213ENST00000621748 SPINK7P58062 85 aa8.97□□□□□ -0.97
SCAMP4-213ENST00000621748 RBM12B-AS1Q9P1G2 102 aa8.97□□□□□ -0.97
SCAMP4-213ENST00000621748 IGKV2D-30A0A075B6S6 120 aa8.95□□□□□ -0.98
SCAMP4-213ENST00000621748 IGKV2-30P06310 120 aa8.95□□□□□ -0.98
SCAMP4-213ENST00000621748 Q5W150 140 aa8.94□□□□□ -0.98
SCAMP4-213ENST00000621748 C7orf65Q6ZTY9 151 aa8.94□□□□□ -0.98
SCAMP4-213ENST00000621748 TRAV22A0A0B4J277 110 aa8.93□□□□□ -0.98
SCAMP4-213ENST00000621748 ATOX1O00244 68 aa8.92□□□□□ -0.98
SCAMP4-213ENST00000621748 FAM236AA0A1B0GUQ0 79 aa8.91□□□□□ -0.98
SCAMP4-213ENST00000621748 FAM236BA0A1B0GV22 79 aa8.91□□□□□ -0.98
SCAMP4-213ENST00000621748 SMIM20Q8N5G0 67 aa8.91□□□□□ -0.98
SCAMP4-213ENST00000621748 MP68P56378 58 aa8.9□□□□□ -0.98
SCAMP4-213ENST00000621748 H0Y9P7 68 aa8.89□□□□□ -0.99
SCAMP4-213ENST00000621748 USH2AO75445 5202 aa8.86□□□□□ -0.99
SCAMP4-213ENST00000621748 MT2AP02795 61 aa8.86□□□□□ -0.99
SCAMP4-213ENST00000621748 C5orf47Q569G3 176 aa8.86□□□□□ -0.99
SCAMP4-213ENST00000621748 LOC101927531A0A1B0GV80 90 aa8.85□□□□□ -0.99
SCAMP4-213ENST00000621748 OCR1Q9BZK8 76 aa8.85□□□□□ -0.99
SCAMP4-213ENST00000621748 TRAV7A0A075B6U4 112 aa8.8□□□□□ -1
SCAMP4-213ENST00000621748 C1orf64Q8NEQ6 169 aa8.8□□□□□ -1
SCAMP4-213ENST00000621748 MT1FP04733 61 aa8.79□□□□□ -1
SCAMP4-213ENST00000621748 LINC00208Q96KT6 92 aa8.79□□□□□ -1
SCAMP4-213ENST00000621748 SSPOA2VEC9 5147 aa8.79□□□□□ -1
SCAMP4-213ENST00000621748 H3BPC8 53 aa8.78□□□□□ -1
SCAMP4-213ENST00000621748 CYP4F30PQ9H0H9 118 aa8.76□□□□□ -1.01
SCAMP4-213ENST00000621748 KRTAP10-10P60014 251 aa8.73□□□□□ -1.01
SCAMP4-213ENST00000621748 KRTAP9-3Q9BYQ3 159 aa8.71□□□□□ -1.02
SCAMP4-213ENST00000621748 C4orf26Q17RF5 130 aa8.7□□□□□ -1.02
SCAMP4-213ENST00000621748 LCE2BO14633 110 aa8.69□□□□□ -1.02
SCAMP4-213ENST00000621748 SERP2Q8N6R1 65 aa8.69□□□□□ -1.02
SCAMP4-213ENST00000621748 H1FX-AS1Q4G0G2 97 aa8.62□□□□□ -1.03
SCAMP4-213ENST00000621748 ANAPC13Q9BS18 74 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 134.6 ms