RNA–Protein interactions for RNA: ENST00000621131.4

VPS29-212, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 1,124 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-212ENST00000621131 CHTF8P0CG12 524 aa2.81□□□□□ -1.96
VPS29-212ENST00000621131 LINC00336Q6ZUF6 198 aa2.81□□□□□ -1.96
VPS29-212ENST00000621131 PHF5AQ7RTV0 110 aaKnown RBP2.81□□□□□ -1.96
VPS29-212ENST00000621131 DEFB105AQ8NG35 78 aa2.81□□□□□ -1.96
VPS29-212ENST00000621131 OBSCN-AS1Q96MR7 158 aa2.81□□□□□ -1.96
VPS29-212ENST00000621131 UBL5Q9BZL1 73 aa2.81□□□□□ -1.96
VPS29-212ENST00000621131 ZNF706Q9Y5V0 76 aaPredicted RBP2.81□□□□□ -1.96
VPS29-212ENST00000621131 LOC110117498A0A087WWA1 95 aa2.8□□□□□ -1.96
VPS29-212ENST00000621131 A0A1W2PNN7 141 aa2.8□□□□□ -1.96
VPS29-212ENST00000621131 BCE1O60756 84 aa2.8□□□□□ -1.96
VPS29-212ENST00000621131 HIGD2AQ9BW72 106 aa2.8□□□□□ -1.96
VPS29-212ENST00000621131 RNF213Q63HN8 5207 aa2.79□□□□□ -1.96
VPS29-212ENST00000621131 SCGB1A1P11684 91 aa2.79□□□□□ -1.96
VPS29-212ENST00000621131 FUSP35637 526 aaKnown RBP eCLIP2.79□□□□□ -1.96
VPS29-212ENST00000621131 ATP5EP2Q5VTU8 51 aa2.79□□□□□ -1.96
VPS29-212ENST00000621131 LINC00643Q86TS7 51 aa2.79□□□□□ -1.96
VPS29-212ENST00000621131 PLAC8Q9NZF1 115 aa2.79□□□□□ -1.96
VPS29-212ENST00000621131 A0A1B0GW54 56 aa2.78□□□□□ -1.96
VPS29-212ENST00000621131 PRLHP81277 87 aa2.78□□□□□ -1.96
VPS29-212ENST00000621131 Q6ZQT0 140 aa2.78□□□□□ -1.96
VPS29-212ENST00000621131 SMCR5Q8TEV8 140 aa2.78□□□□□ -1.96
VPS29-212ENST00000621131 Q9BRP9 147 aa2.78□□□□□ -1.96
VPS29-212ENST00000621131 MUC2Q02817 5179 aa2.78□□□□□ -1.96
VPS29-212ENST00000621131 DNAH5Q8TE73 4624 aa2.78□□□□□ -1.97
VPS29-212ENST00000621131 FLG2Q5D862 2391 aaPredicted RBP2.77□□□□□ -1.97
VPS29-212ENST00000621131 IGLV5-48A0A075B6I7 105 aa2.77□□□□□ -1.97
VPS29-212ENST00000621131 TRBV7-4A0A0J9YYF1 115 aa2.77□□□□□ -1.97
VPS29-212ENST00000621131 C1orf137Q5JT78 98 aa2.77□□□□□ -1.97
VPS29-212ENST00000621131 Q6JHZ5 121 aa2.77□□□□□ -1.97
VPS29-212ENST00000621131 IMUPQ9GZP8 106 aa2.77□□□□□ -1.97
VPS29-212ENST00000621131 FAT4Q6V0I7 4981 aa2.77□□□□□ -1.97
VPS29-212ENST00000621131 PKHD1L1Q86WI1 4243 aa2.76□□□□□ -1.97
VPS29-212ENST00000621131 MT-ATP8P03928 68 aa2.76□□□□□ -1.97
VPS29-212ENST00000621131 Q6Q795 121 aa2.76□□□□□ -1.97
VPS29-212ENST00000621131 ST20-AS1Q8NBB2 130 aa2.76□□□□□ -1.97
VPS29-212ENST00000621131 MUC19Q7Z5P9 8384 aa2.75□□□□□ -1.97
VPS29-212ENST00000621131 ERC2-IT1O76042 136 aa2.75□□□□□ -1.97
VPS29-212ENST00000621131 SPRR1BP22528 89 aa2.75□□□□□ -1.97
VPS29-212ENST00000621131 RPL37AP61513 92 aaKnown RBP2.75□□□□□ -1.97
VPS29-212ENST00000621131 NREPQ16612 68 aa2.75□□□□□ -1.97
VPS29-212ENST00000621131 C9orf153Q5TBE3 101 aa2.75□□□□□ -1.97
VPS29-212ENST00000621131 LINC00846Q9NV44 126 aa2.75□□□□□ -1.97
VPS29-212ENST00000621131 PSORS1C2Q9UIG4 136 aa2.75□□□□□ -1.97
VPS29-212ENST00000621131 FAT1Q14517 4588 aa2.74□□□□□ -1.97
VPS29-212ENST00000621131 TRBV7-7A0A0K0K1E9 115 aa2.74□□□□□ -1.97
VPS29-212ENST00000621131 IGLV7-43P04211 117 aa2.74□□□□□ -1.97
VPS29-212ENST00000621131 HAMPP81172 84 aa2.74□□□□□ -1.97
VPS29-212ENST00000621131 C3orf22Q8N5N4 141 aa2.74□□□□□ -1.97
VPS29-212ENST00000621131 HIST1H4AP62805 103 aaKnown RBP2.73□□□□□ -1.97
VPS29-212ENST00000621131 Q6ZSA8 131 aa2.73□□□□□ -1.97
VPS29-212ENST00000621131 SCXQ7RTU7 201 aa2.73□□□□□ -1.97
VPS29-212ENST00000621131 KRTAP13-1Q8IUC0 172 aa2.73□□□□□ -1.97
VPS29-212ENST00000621131 CIRBP-AS1Q8TBR5 109 aa2.73□□□□□ -1.97
VPS29-212ENST00000621131 SPRR4Q96PI1 79 aa2.73□□□□□ -1.97
VPS29-212ENST00000621131 IGKV3D-7A0A0C4DH55 119 aa2.72□□□□□ -1.97
VPS29-212ENST00000621131 BPY2O14599 106 aa2.72□□□□□ -1.97
VPS29-212ENST00000621131 LINC00483Q53H64 154 aa2.72□□□□□ -1.97
VPS29-212ENST00000621131 IGFL1Q6UW32 110 aa2.72□□□□□ -1.97
VPS29-212ENST00000621131 ANAPC13Q9BS18 74 aa2.72□□□□□ -1.97
VPS29-212ENST00000621131 SS18L2Q9UHA2 77 aa2.72□□□□□ -1.97
VPS29-212ENST00000621131 LRP2P98164 4655 aa2.72□□□□□ -1.97
VPS29-212ENST00000621131 FAM236AA0A1B0GUQ0 79 aa2.71□□□□□ -1.98
VPS29-212ENST00000621131 FAM236BA0A1B0GV22 79 aa2.71□□□□□ -1.98
VPS29-212ENST00000621131 ATOX1O00244 68 aa2.71□□□□□ -1.98
VPS29-212ENST00000621131 CRYGAP11844 174 aa2.71□□□□□ -1.98
VPS29-212ENST00000621131 A0A1W2PNM2 257 aa2.7□□□□□ -1.98
VPS29-212ENST00000621131 SMIM20Q8N5G0 67 aa2.7□□□□□ -1.98
VPS29-212ENST00000621131 A0A087WSZ3 146 aa2.69□□□□□ -1.98
VPS29-212ENST00000621131 J3KT08 172 aa2.69□□□□□ -1.98
VPS29-212ENST00000621131 MOBPQ13875 183 aa2.69□□□□□ -1.98
VPS29-212ENST00000621131 FAM229BQ4G0N7 80 aa2.69□□□□□ -1.98
VPS29-212ENST00000621131 NDUFB1O75438 58 aa2.68□□□□□ -1.98
VPS29-212ENST00000621131 SPINK6Q6UWN8 80 aa2.68□□□□□ -1.98
VPS29-212ENST00000621131 SSBP3-AS1Q7Z2R9 100 aa2.68□□□□□ -1.98
VPS29-212ENST00000621131 CD164Q04900 197 aa2.67□□□□□ -1.98
VPS29-212ENST00000621131 LIMD2Q9BT23 127 aa2.67□□□□□ -1.98
VPS29-212ENST00000621131 A0A087WVE0 104 aa2.66□□□□□ -1.98
VPS29-212ENST00000621131 HRCT1Q6UXD1 115 aa2.66□□□□□ -1.98
VPS29-212ENST00000621131 UQCRQO14949 82 aa2.65□□□□□ -1.99
VPS29-212ENST00000621131 SMR3BP02814 79 aaPredicted RBP2.65□□□□□ -1.99
VPS29-212ENST00000621131 IGKV4-1P06312 121 aa2.65□□□□□ -1.99
VPS29-212ENST00000621131 SERP2Q8N6R1 65 aa2.65□□□□□ -1.99
VPS29-212ENST00000621131 TNXBP22105 4242 aa2.65□□□□□ -1.99
VPS29-212ENST00000621131 A0A0G2JQZ4 141 aa2.64□□□□□ -1.99
VPS29-212ENST00000621131 A8MWP4 228 aa2.64□□□□□ -1.99
VPS29-212ENST00000621131 HCG22E2RYF7 251 aa2.64□□□□□ -1.99
VPS29-212ENST00000621131 COX7CP15954 63 aa2.64□□□□□ -1.99
VPS29-212ENST00000621131 FAT3Q8TDW7 4589 aa2.64□□□□□ -1.99
VPS29-212ENST00000621131 DNAH8Q96JB1 4490 aa2.63□□□□□ -1.99
VPS29-212ENST00000621131 LRP1Q07954 4544 aaKnown RBP2.63□□□□□ -1.99
VPS29-212ENST00000621131 TRAV7A0A075B6U4 112 aa2.63□□□□□ -1.99
VPS29-212ENST00000621131 K7EQZ3 153 aa2.63□□□□□ -1.99
VPS29-212ENST00000621131 SPAG11AQ6PDA7 123 aa2.63□□□□□ -1.99
VPS29-212ENST00000621131 DEFB116Q30KQ4 102 aa2.62□□□□□ -1.99
VPS29-212ENST00000621131 ASB16-AS1Q495Z4 193 aa2.62□□□□□ -1.99
VPS29-212ENST00000621131 CASC2Q6XLA1 102 aa2.62□□□□□ -1.99
VPS29-212ENST00000621131 PRR15Q8IV56 129 aa2.62□□□□□ -1.99
VPS29-212ENST00000621131 LINC00472Q9H8W2 130 aa2.62□□□□□ -1.99
VPS29-212ENST00000621131 FSIP2Q5CZC0 6907 aa2.62□□□□□ -1.99
VPS29-212ENST00000621131 A0A1B0GVX0 72 aa2.61□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms